FFCP PHASE1:Hg19::chr4:77997126..77997151,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10983 | |EntrezGene=10983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1595 | |HGNC=1595 | ||
|TSSclassifier=strong | |||
|UniProt=D6REZ3,B7Z6X4 | |UniProt=D6REZ3,B7Z6X4 | ||
|association_with_transcript=0bp_to_ENST00000507788,ENST00000537948_5end | |association_with_transcript=0bp_to_ENST00000507788,ENST00000537948_5end | ||
|cluster_id=chr4:77997126..77997151,- | |||
|description=CAGE_peak_1_at_CCNI_5end | |description=CAGE_peak_1_at_CCNI_5end | ||
|id=chr4:77997126..77997151,- | |id=chr4:77997126..77997151,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.82e-34!115;UBERON:0005743!6.09e-12!86;UBERON:0001017!1.06e-11!82;UBERON:0000073!1.67e-11!94;UBERON:0001016!1.67e-11!94;UBERON:0001049!1.76e-11!57;UBERON:0005068!1.76e-11!57;UBERON:0006241!1.76e-11!57;UBERON:0007135!1.76e-11!57;UBERON:0000924!5.94e-10!173;UBERON:0006601!5.94e-10!173;UBERON:0004121!1.30e-09!169;UBERON:0002346!1.54e-09!90;UBERON:0001950!1.79e-09!20;UBERON:0002619!2.37e-09!22;UBERON:0003075!3.15e-09!86;UBERON:0007284!3.15e-09!86;UBERON:0002616!8.56e-09!59;UBERON:0003080!9.31e-09!42;UBERON:0000955!1.07e-08!69;UBERON:0006238!1.07e-08!69;UBERON:0002780!2.99e-08!41;UBERON:0001890!2.99e-08!41;UBERON:0006240!2.99e-08!41;UBERON:0000956!7.67e-08!25;UBERON:0000203!7.67e-08!25;UBERON:0001869!9.32e-08!32;UBERON:0002020!1.28e-07!34;UBERON:0003528!1.28e-07!34;UBERON:0001893!2.37e-07!34;UBERON:0002791!4.62e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!1.82e-34!115;UBERON:0005743!6.09e-12!86;UBERON:0001017!1.06e-11!82;UBERON:0000073!1.67e-11!94;UBERON:0001016!1.67e-11!94;UBERON:0001049!1.76e-11!57;UBERON:0005068!1.76e-11!57;UBERON:0006241!1.76e-11!57;UBERON:0007135!1.76e-11!57;UBERON:0000924!5.94e-10!173;UBERON:0006601!5.94e-10!173;UBERON:0004121!1.30e-09!169;UBERON:0002346!1.54e-09!90;UBERON:0001950!1.79e-09!20;UBERON:0002619!2.37e-09!22;UBERON:0003075!3.15e-09!86;UBERON:0007284!3.15e-09!86;UBERON:0002616!8.56e-09!59;UBERON:0003080!9.31e-09!42;UBERON:0000955!1.07e-08!69;UBERON:0006238!1.07e-08!69;UBERON:0002780!2.99e-08!41;UBERON:0001890!2.99e-08!41;UBERON:0006240!2.99e-08!41;UBERON:0000956!7.67e-08!25;UBERON:0000203!7.67e-08!25;UBERON:0001869!9.32e-08!32;UBERON:0002020!1.28e-07!34;UBERON:0003528!1.28e-07!34;UBERON:0001893!2.37e-07!34;UBERON:0002791!4.62e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.81e-09;20!UBERON:0002619;2.39e-09;22!UBERON:0007023;3.08e-09;114!UBERON:0000956;7.67e-08;25!UBERON:0000203;7.67e-08;25!UBERON:0001869;3.77e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.95e-34,114;UBERON:0001017,3.11e-11,81;UBERON:0001049,5.82e-11,56;UBERON:0005068,5.82e-11,56;UBERON:0006241,5.82e-11,56;UBERON:0007135,5.82e-11,56;UBERON:0001016,8.46e-11,89;UBERON:0000073,1.15e-09,53;UBERON:0002616,1.15e-09,53;UBERON:0001950,1.79e-09,20;UBERON:0002619,2.37e-09,22;UBERON:0004121,3.47e-09,171;UBERON:0000924,3.47e-09,171;UBERON:0006601,3.47e-09,171;UBERON:0002346,4.22e-09,86;UBERON:0010371,4.88e-09,104;UBERON:0003075,8.60e-09,82;UBERON:0007284,8.60e-09,82;UBERON:0000955,2.91e-08,68;UBERON:0006238,2.91e-08,68;UBERON:0002780,2.99e-08,41;UBERON:0001890,2.99e-08,41;UBERON:0003080,2.99e-08,41;UBERON:0006240,2.99e-08,41;UBERON:0000956,7.67e-08,25;UBERON:0000203,7.67e-08,25;UBERON:0001869,9.32e-08,32;UBERON:0003528,1.28e-07,34;UBERON:0002020,1.28e-07,34;UBERON:0001893,2.37e-07,34;UBERON:0002791,3.20e-07,32 | |||
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| ||
|short_description=p1@CCNI | |short_description=p1@CCNI | ||
}} | }} |
Latest revision as of 19:10, 18 September 2015
Short description: | p1@CCNI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCNI_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000507788, ENST00000537948_5end |
EntrezGene: | CCNI |
HGNC: | 1595 |
UniProt: | D6REZ3B7Z6X4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.95e-34 | 114 |
central nervous system | 3.11e-11 | 81 |
neural tube | 5.82e-11 | 56 |
neural rod | 5.82e-11 | 56 |
future spinal cord | 5.82e-11 | 56 |
neural keel | 5.82e-11 | 56 |
nervous system | 8.46e-11 | 89 |
regional part of nervous system | 1.15e-09 | 53 |
regional part of brain | 1.15e-09 | 53 |
neocortex | 1.79e-09 | 20 |
regional part of cerebral cortex | 2.37e-09 | 22 |
ectoderm-derived structure | 3.47e-09 | 171 |
ectoderm | 3.47e-09 | 171 |
presumptive ectoderm | 3.47e-09 | 171 |
neurectoderm | 4.22e-09 | 86 |
ecto-epithelium | 4.88e-09 | 104 |
neural plate | 8.60e-09 | 82 |
presumptive neural plate | 8.60e-09 | 82 |
brain | 2.91e-08 | 68 |
future brain | 2.91e-08 | 68 |
regional part of forebrain | 2.99e-08 | 41 |
forebrain | 2.99e-08 | 41 |
anterior neural tube | 2.99e-08 | 41 |
future forebrain | 2.99e-08 | 41 |
cerebral cortex | 7.67e-08 | 25 |
pallium | 7.67e-08 | 25 |
cerebral hemisphere | 9.32e-08 | 32 |
brain grey matter | 1.28e-07 | 34 |
gray matter | 1.28e-07 | 34 |
telencephalon | 2.37e-07 | 34 |
regional part of telencephalon | 3.20e-07 | 32 |