FFCP PHASE1:Hg19::chr5:76383070..76383117,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84327 | |EntrezGene=84327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20711 | |HGNC=20711 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IU2 | |UniProt=Q96IU2 | ||
|association_with_transcript=30bp_to_ENST00000255198_5end | |association_with_transcript=30bp_to_ENST00000255198_5end | ||
|cluster_id=chr5:76383070..76383117,- | |||
|description=CAGE_peak_3_at_ZBED3_5end | |description=CAGE_peak_3_at_ZBED3_5end | ||
|id=chr5:76383070..76383117,- | |id=chr5:76383070..76383117,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.88e-14!94;UBERON:0001016!8.88e-14!94;UBERON:0005743!1.94e-12!86;UBERON:0001017!3.70e-11!82;UBERON:0000955!6.31e-10!69;UBERON:0006238!6.31e-10!69;UBERON:0003080!1.68e-09!42;UBERON:0001049!1.88e-09!57;UBERON:0005068!1.88e-09!57;UBERON:0006241!1.88e-09!57;UBERON:0007135!1.88e-09!57;UBERON:0002780!4.79e-09!41;UBERON:0001890!4.79e-09!41;UBERON:0006240!4.79e-09!41;UBERON:0002616!1.43e-08!59;UBERON:0002346!1.53e-08!90;UBERON:0001893!3.14e-08!34;UBERON:0002791!4.86e-08!33;UBERON:0003056!6.81e-08!61;UBERON:0002020!7.33e-08!34;UBERON:0003528!7.33e-08!34;UBERON:0003075!1.33e-07!86;UBERON:0007284!1.33e-07!86;UBERON:0001869!2.75e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.34e-08;34!UBERON:0002791;8.52e-08;32!UBERON:0002780;1.04e-07;41!UBERON:0001890;1.04e-07;41!UBERON:0001869;1.48e-07;32!UBERON:0003528;1.48e-07;34!UBERON:0002020;1.48e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.42e-13,223;UBERON:0001016,7.01e-12,89;UBERON:0001017,6.27e-11,81;UBERON:0002346,1.90e-10,86;UBERON:0000955,7.23e-10,68;UBERON:0006238,7.23e-10,68;UBERON:0001049,7.77e-10,56;UBERON:0005068,7.77e-10,56;UBERON:0006241,7.77e-10,56;UBERON:0007135,7.77e-10,56;UBERON:0002780,8.43e-10,41;UBERON:0001890,8.43e-10,41;UBERON:0003080,8.43e-10,41;UBERON:0006240,8.43e-10,41;UBERON:0000073,1.07e-09,53;UBERON:0002616,1.07e-09,53;UBERON:0001893,1.97e-09,34;UBERON:0003075,2.54e-09,82;UBERON:0007284,2.54e-09,82;UBERON:0003528,5.27e-09,34;UBERON:0002020,5.27e-09,34;UBERON:0003056,1.00e-08,61;UBERON:0002791,1.16e-08,32;UBERON:0001869,2.40e-08,32 | |||
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|short_description=p3@ZBED3 | |short_description=p3@ZBED3 | ||
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Latest revision as of 19:12, 18 September 2015
Short description: | p3@ZBED3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZBED3_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000255198_5end |
EntrezGene: | ZBED3 |
HGNC: | 20711 |
UniProt: | Q96IU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.42e-13 | 223 |
nervous system | 7.01e-12 | 89 |
central nervous system | 6.27e-11 | 81 |
neurectoderm | 1.90e-10 | 86 |
brain | 7.23e-10 | 68 |
future brain | 7.23e-10 | 68 |
neural tube | 7.77e-10 | 56 |
neural rod | 7.77e-10 | 56 |
future spinal cord | 7.77e-10 | 56 |
neural keel | 7.77e-10 | 56 |
regional part of forebrain | 8.43e-10 | 41 |
forebrain | 8.43e-10 | 41 |
anterior neural tube | 8.43e-10 | 41 |
future forebrain | 8.43e-10 | 41 |
regional part of nervous system | 1.07e-09 | 53 |
regional part of brain | 1.07e-09 | 53 |
telencephalon | 1.97e-09 | 34 |
neural plate | 2.54e-09 | 82 |
presumptive neural plate | 2.54e-09 | 82 |
brain grey matter | 5.27e-09 | 34 |
gray matter | 5.27e-09 | 34 |
pre-chordal neural plate | 1.00e-08 | 61 |
regional part of telencephalon | 1.16e-08 | 32 |
cerebral hemisphere | 2.40e-08 | 32 |