FFCP PHASE1:Hg19::chr12:51477368..51477386,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:51477368..51477386,- to FFCP PHASE1:Hg19::chr12:51477368..51477386,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81566 | |EntrezGene=81566 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16006 | |HGNC=16006 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000550461_5end | |||
|cluster_id=chr12:51477368..51477386,- | |||
|description=CAGE_peak_1_at_CSRNP2_5end | |||
|id=chr12:51477368..51477386,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.46e-13!82;UBERON:0000073!2.89e-13!94;UBERON:0001016!2.89e-13!94;UBERON:0005743!1.18e-12!86;UBERON:0001049!1.64e-12!57;UBERON:0005068!1.64e-12!57;UBERON:0006241!1.64e-12!57;UBERON:0007135!1.64e-12!57;UBERON:0003080!1.50e-10!42;UBERON:0002616!2.38e-10!59;UBERON:0000955!4.39e-10!69;UBERON:0006238!4.39e-10!69;UBERON:0002780!4.94e-10!41;UBERON:0001890!4.94e-10!41;UBERON:0006240!4.94e-10!41;UBERON:0002346!5.58e-10!90;UBERON:0003075!8.35e-10!86;UBERON:0007284!8.35e-10!86;UBERON:0002020!1.25e-09!34;UBERON:0003528!1.25e-09!34;UBERON:0001893!2.06e-09!34;UBERON:0002791!2.79e-09!33;UBERON:0001869!4.31e-09!32;UBERON:0001950!2.74e-08!20;UBERON:0000924!4.09e-08!173;UBERON:0006601!4.09e-08!173;UBERON:0004121!6.87e-08!169;UBERON:0002619!7.39e-08!22;UBERON:0000956!7.90e-08!25;UBERON:0000203!7.90e-08!25;UBERON:0003056!1.45e-07!61;UBERON:0000468!1.47e-07!659;UBERON:0000922!4.22e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.18e-08;32!UBERON:0001869;2.24e-08;32!UBERON:0001893;2.58e-08;34!UBERON:0003528;2.71e-08;34!UBERON:0002020;2.71e-08;34!UBERON:0001950;3.29e-08;20!UBERON:0002780;5.98e-08;41!UBERON:0001890;5.98e-08;41!UBERON:0000956;8.17e-08;25!UBERON:0000203;8.17e-08;25!UBERON:0002619;9.04e-08;22!UBERON:0000073;2.99e-07;53!UBERON:0002616;2.99e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.90e-13,89;UBERON:0001017,7.30e-13,81;UBERON:0001049,5.28e-12,56;UBERON:0005068,5.28e-12,56;UBERON:0006241,5.28e-12,56;UBERON:0007135,5.28e-12,56;UBERON:0000073,2.32e-11,53;UBERON:0002616,2.32e-11,53;UBERON:0002780,4.94e-10,41;UBERON:0001890,4.94e-10,41;UBERON:0003080,4.94e-10,41;UBERON:0006240,4.94e-10,41;UBERON:0002346,5.86e-10,86;UBERON:0003075,8.62e-10,82;UBERON:0007284,8.62e-10,82;UBERON:0000955,1.21e-09,68;UBERON:0006238,1.21e-09,68;UBERON:0003528,1.25e-09,34;UBERON:0002020,1.25e-09,34;UBERON:0001893,2.06e-09,34;UBERON:0002791,3.65e-09,32;UBERON:0001869,4.31e-09,32;UBERON:0001950,2.74e-08,20;UBERON:0002619,7.39e-08,22;UBERON:0000956,7.90e-08,25;UBERON:0000203,7.90e-08,25;UBERON:0003056,1.38e-07,61;UBERON:0004121,1.46e-07,171;UBERON:0000924,1.46e-07,171;UBERON:0006601,1.46e-07,171;UBERON:0010371,3.42e-07,104;UBERON:0000922,7.41e-07,592 | |||
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| ||
|short_description=p1@CSRNP2 | |||
}} | }} |
Latest revision as of 19:29, 18 September 2015
Short description: | p1@CSRNP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSRNP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000550461_5end |
EntrezGene: | CSRNP2 |
HGNC: | 16006 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.90e-13 | 89 |
central nervous system | 7.30e-13 | 81 |
neural tube | 5.28e-12 | 56 |
neural rod | 5.28e-12 | 56 |
future spinal cord | 5.28e-12 | 56 |
neural keel | 5.28e-12 | 56 |
regional part of nervous system | 2.32e-11 | 53 |
regional part of brain | 2.32e-11 | 53 |
regional part of forebrain | 4.94e-10 | 41 |
forebrain | 4.94e-10 | 41 |
anterior neural tube | 4.94e-10 | 41 |
future forebrain | 4.94e-10 | 41 |
neurectoderm | 5.86e-10 | 86 |
neural plate | 8.62e-10 | 82 |
presumptive neural plate | 8.62e-10 | 82 |
brain | 1.21e-09 | 68 |
future brain | 1.21e-09 | 68 |
brain grey matter | 1.25e-09 | 34 |
gray matter | 1.25e-09 | 34 |
telencephalon | 2.06e-09 | 34 |
regional part of telencephalon | 3.65e-09 | 32 |
cerebral hemisphere | 4.31e-09 | 32 |
neocortex | 2.74e-08 | 20 |
regional part of cerebral cortex | 7.39e-08 | 22 |
cerebral cortex | 7.90e-08 | 25 |
pallium | 7.90e-08 | 25 |
pre-chordal neural plate | 1.38e-07 | 61 |
ectoderm-derived structure | 1.46e-07 | 171 |
ectoderm | 1.46e-07 | 171 |
presumptive ectoderm | 1.46e-07 | 171 |
ecto-epithelium | 3.42e-07 | 104 |
embryo | 7.41e-07 | 592 |