FFCP PHASE1:Hg19::chr11:62321179..62321195,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:62321179..62321195,+
|short_description=p1@AF083120
|description=CAGE_peak_1_at_AF083120_5end
|association_with_transcript=14bp_to_AF083120_5end
|EntrezG...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9HDB1 | |UniProt=Q9HDB1 | ||
|association_with_transcript=14bp_to_AF083120_5end | |||
|cluster_id=chr11:62321179..62321195,+ | |||
|coexpression_cluster_id=C512 | |||
|description=CAGE_peak_1_at_AF083120_5end | |||
|id=chr11:62321179..62321195,+ | |||
|ontology_enrichment_celltype=CL:0000860!7.18e-46!45;CL:0002057!1.80e-44!42;CL:0000557!5.56e-38!71;CL:0000738!4.07e-37!140;CL:0002009!3.87e-35!65;CL:0000766!2.53e-34!76;CL:0000839!3.44e-33!70;CL:0002194!7.45e-33!63;CL:0000576!7.45e-33!63;CL:0000040!7.45e-33!63;CL:0000559!7.45e-33!63;CL:0002031!1.94e-32!124;CL:0002087!1.08e-31!119;CL:0000037!7.79e-29!172;CL:0000566!7.79e-29!172;CL:0000988!1.43e-26!182;CL:0002032!7.08e-26!165;CL:0000837!7.08e-26!165;CL:0000763!1.49e-24!112;CL:0000049!1.49e-24!112;CL:0000134!3.28e-14!358;CL:0002320!7.93e-14!365;CL:0002393!1.91e-12!9;CL:0002397!1.91e-12!9;CL:0000219!2.18e-11!390;CL:0000048!1.49e-10!430;CL:0000723!5.81e-10!436;CL:0000034!1.22e-09!444;CL:0000063!1.03e-08!578;CL:0000003!1.13e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.81e-50;33!CL:0002057;2.81e-50;33!CL:0000576;1.51e-41;48!CL:0000473;3.45e-35;39!CL:0000234;3.45e-35;39!CL:0000766;1.71e-30;69!CL:0002393;9.53e-21;6!CL:0002397;9.53e-21;6!CL:0002087;1.24e-19;104!CL:0000763;3.91e-14;100!CL:0000738;1.46e-12;136!CL:0000767;2.40e-11;3!CL:0000875;1.20e-10;3!CL:0002396;1.20e-10;3!CL:0000226;2.25e-10;3!CL:0000842;2.25e-10;3!CL:0000623;3.82e-10;3!CL:0000988;1.22e-09;177!CL:0001014;3.78e-08;2!CL:0001016;3.78e-08;2!CL:0000219;3.57e-07;193!CL:0000097;4.48e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.55e-81,42;CL:0002057,6.55e-81,42;CL:0000473,1.20e-69,48;CL:0000234,1.20e-69,48;CL:0000557,1.87e-67,67;CL:0000738,1.84e-65,136;CL:0000766,1.76e-62,72;CL:0002009,3.57e-59,61;CL:0000839,1.08e-57,66;CL:0002031,7.37e-56,120;CL:0002194,6.94e-54,59;CL:0000576,6.94e-54,59;CL:0000040,6.94e-54,59;CL:0000559,6.94e-54,59;CL:0000037,1.00e-52,168;CL:0002087,1.01e-52,115;CL:0000988,2.04e-49,177;CL:0002032,6.85e-49,161;CL:0000837,6.85e-49,161;CL:0000763,7.89e-48,108;CL:0000049,7.89e-48,108;CL:0002393,9.87e-30,9;CL:0002397,9.87e-30,9;CL:0000134,2.34e-21,354;CL:0002320,1.09e-20,361;CL:0000219,2.42e-18,386;CL:0000048,1.82e-15,427;CL:0000723,4.53e-15,433;CL:0000034,1.47e-14,441;CL:0000767,2.40e-11,3;CL:0000875,1.07e-10,3;CL:0002396,1.07e-10,3;CL:0000226,2.41e-10,3;CL:0000842,2.41e-10,3;CL:0000623,2.92e-10,3;CL:0000825,2.92e-10,3;CL:0001014,3.85e-08,2;CL:0001016,3.85e-08,2;CL:0000097,4.48e-07,5;CL:0002028,4.48e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;5.62e-55;42!CL:0000049;6.19e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.09e-33!80;UBERON:0001474!3.01e-29!86;UBERON:0002390!6.40e-29!102;UBERON:0003061!6.40e-29!102;UBERON:0004765!4.47e-25!101;UBERON:0001434!4.47e-25!101;UBERON:0002193!1.98e-24!112;UBERON:0002405!8.03e-19!115;UBERON:0003081!5.33e-15!216;UBERON:0002384!4.77e-13!375;UBERON:0002204!7.93e-13!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.38e-58,76;UBERON:0001474,2.23e-53,82;UBERON:0002390,8.35e-51,98;UBERON:0003061,8.35e-51,98;UBERON:0004765,9.03e-48,90;UBERON:0002405,6.49e-46,93;UBERON:0002193,3.86e-45,108;UBERON:0001434,5.18e-42,100;UBERON:0003081,1.75e-21,203;UBERON:0002204,3.58e-21,167;UBERON:0002384,8.81e-20,371;UBERON:0000926,9.19e-11,315;UBERON:0004120,9.19e-11,315;UBERON:0006603,9.19e-11,315 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0.436882744260345,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,13.3743854128627,11.1310525448192,11.1467608787575,0,0,0,0,0,0.587200878669695,8.86392653651004,9.22504458362652,23.437174037312,0.223915474239924,0.971680998056939,0.257575567634187,1.59938062657521,0.377875943688809,1.94067248950253,1.62700325833979,0.822335776043652,1.54853185447552,0.28769239232215,1.5369642391746,2.60130452877444,2.75796544589295,1.93645405075148,2.70852973188684,0.941211697713023,0.272906150057846,1.12361742222542,2.14258724659632,1.28371610830437,2.55734850319616,0,1.79517291859469,3.83602275479425,4.93355705668593,1.70215567407342,2.4912889959823,0.502497330513487,2.08593167368081,2.17188844705117,3.02699751316684,0.736555271975129,3.16462387440884,4.85887158517466,7.65375479874157,14.0471292490612,5.50410292617826,12.464682105845,7.07192581467153,4.84521664360123,2.98375015798635,4.56660384411585,0,0,0,0,0,0,0,0,0.569212969109448,1.76171156811282,2.29363936875137,0,0.560508562981536,0,0.983548850569165,0.393010762749165,5.14003747498773,0.167186495390678,0,0,0,0.111410456885174,1.17842362989935,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0,1.04535523804977,0,0.766440987203842,0.34362744548263,0.506039384039006,0,0,0,1.95747654801105,0,0,0.710331756132051,0,1.20964045934839,2.67440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0.760272105718513,0,0.735326160691737,0,0,0,0,0,1.89853131913626,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0.485618833104395,0,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2448741675879,24.2121521740495,15.1490920111656,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36436912242313,1.94064817373566,3.46526197955321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,3.92859249633486,5.1771408196468,1.28073069364133,0.303127571446259,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0.47748896947538,0,1.53580351049616,0,0,0.222617410045812,0,0,0.398495976502139,0,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.293977192243133,0.261177619741208,0,0.171986032471617,0.290268993867255,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0,8.54900787895702,21.6664547276226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0.121792598380896,0,0,0.2506898940227,0.612691153526923,0.983617892129413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0.450772826991655,0,0,0,0,0.464033759878494,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0.358177682162975,0,0,0.353378291891762,0.192914038270915,0,0,0,0,0,0,0.531459361253452,1.14495775979091,0,0.491545817507439,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0.436882744260345,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,13.3743854128627,11.1310525448192,11.1467608787575,0,0,0,0,0,0.587200878669695,8.86392653651004,9.22504458362652,23.437174037312,0.223915474239924,0.971680998056939,0.257575567634187,1.59938062657521,0.377875943688809,1.94067248950253,1.62700325833979,0.822335776043652,1.54853185447552,0.28769239232215,1.5369642391746,2.60130452877444,2.75796544589295,1.93645405075148,2.70852973188684,0.941211697713023,0.272906150057846,1.12361742222542,2.14258724659632,1.28371610830437,2.55734850319616,0,1.79517291859469,3.83602275479425,4.93355705668593,1.70215567407342,2.4912889959823,0.502497330513487,2.08593167368081,2.17188844705117,3.02699751316684,0.736555271975129,3.16462387440884,4.85887158517466,7.65375479874157,14.0471292490612,5.50410292617826,12.464682105845,7.07192581467153,4.84521664360123,2.98375015798635,4.56660384411585,0,0,0,0,0,0,0,0,0.569212969109448,1.76171156811282,2.29363936875137,0,0.560508562981536,0,0.983548850569165,0.393010762749165,5.14003747498773,0.167186495390678,0,0,0,0.111410456885174,1.17842362989935,0.221533894583621,0.270803863765016,0,0,0,0,0,0.14828656316206,0,1.04535523804977,0,0.766440987203842,0.34362744548263,0.506039384039006,0,0,0,1.95747654801105,0,0,0.710331756132051,0,1.20964045934839,2.67440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0.760272105718513,0,0.735326160691737,0,0,0,0,0,1.89853131913626,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0.485618833104395,0,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2448741675879,24.2121521740495,15.1490920111656,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36436912242313,1.94064817373566,3.46526197955321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,3.92859249633486,5.1771408196468,1.28073069364133,0.303127571446259,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0.47748896947538,0,1.53580351049616,0,0,0.222617410045812,0,0,0.398495976502139,0,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.293977192243133,0.261177619741208,0,0.171986032471617,0.290268993867255,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0,8.54900787895702,21.6664547276226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0.121792598380896,0,0,0.2506898940227,0.612691153526923,0.983617892129413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0.450772826991655,0,0,0,0,0.464033759878494,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0.358177682162975,0,0,0.353378291891762,0.192914038270915,0,0,0,0,0,0,0.531459361253452,1.14495775979091,0,0.491545817507439,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p1@AF083120 | |||
}} | }} |
Latest revision as of 19:35, 18 September 2015
Short description: | p1@AF083120 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AF083120_5end |
Coexpression cluster: | C512_Mast_immature_Basophils_CD14_CD34_Peripheral_Natural |
Association with transcript: | 14bp_to_AF083120_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.38e-58 | 76 |
bone element | 2.23e-53 | 82 |
hematopoietic system | 8.35e-51 | 98 |
blood island | 8.35e-51 | 98 |
skeletal element | 9.03e-48 | 90 |
immune system | 6.49e-46 | 93 |
hemolymphoid system | 3.86e-45 | 108 |
skeletal system | 5.18e-42 | 100 |
lateral plate mesoderm | 1.75e-21 | 203 |
musculoskeletal system | 3.58e-21 | 167 |
connective tissue | 8.81e-20 | 371 |
mesoderm | 9.19e-11 | 315 |
mesoderm-derived structure | 9.19e-11 | 315 |
presumptive mesoderm | 9.19e-11 | 315 |