FFCP PHASE1:Hg19::chr19:47112956..47112974,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:47112956..47112974,+ to FFCP PHASE1:Hg19::chr19:47112956..47112974,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=808 | |EntrezGene=808 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1449 | |HGNC=1449 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_AL050207_5end | |||
|cluster_id=chr19:47112956..47112974,+ | |||
|description=CAGE_peak_18_at_CALM3_5end | |||
|id=chr19:47112956..47112974,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!6.77e-10!32;UBERON:0001893!2.41e-09!34;UBERON:0002020!4.07e-09!34;UBERON:0003528!4.07e-09!34;UBERON:0002791!7.53e-09!33;UBERON:0000956!3.35e-07!25;UBERON:0000203!3.35e-07!25;UBERON:0002780!8.73e-07!41;UBERON:0001890!8.73e-07!41;UBERON:0006240!8.73e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.88e-11;32!UBERON:0001893;2.64e-10;34!UBERON:0002791;2.34e-09;32!UBERON:0003528;4.42e-09;34!UBERON:0002020;4.42e-09;34!UBERON:0000956;5.67e-08;25!UBERON:0000203;5.67e-08;25!UBERON:0001950;9.93e-08;20!UBERON:0002619;8.21e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,7.21e-12,32;UBERON:0001893,6.94e-11,34;UBERON:0002791,2.09e-10,32;UBERON:0003528,1.57e-09,34;UBERON:0002020,1.57e-09,34;UBERON:0002780,2.02e-09,41;UBERON:0001890,2.02e-09,41;UBERON:0003080,2.02e-09,41;UBERON:0006240,2.02e-09,41;UBERON:0001049,5.59e-09,56;UBERON:0005068,5.59e-09,56;UBERON:0006241,5.59e-09,56;UBERON:0007135,5.59e-09,56;UBERON:0000073,7.11e-09,53;UBERON:0002616,7.11e-09,53;UBERON:0001017,2.37e-08,81;UBERON:0000956,4.28e-08,25;UBERON:0000203,4.28e-08,25;UBERON:0001950,6.16e-08,20;UBERON:0004111,1.25e-07,240;UBERON:0002619,5.37e-07,22;UBERON:0000955,5.92e-07,68;UBERON:0006238,5.92e-07,68;UBERON:0004876,6.71e-07,11;UBERON:0000369,7.55e-07,4;UBERON:0002435,7.55e-07,4;UBERON:0000204,7.55e-07,4;UBERON:0010082,7.55e-07,4;UBERON:0001016,8.35e-07,89 | |||
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| ||
|short_description=p18@CALM3 | |||
}} | }} |
Latest revision as of 21:05, 18 September 2015
Short description: | p18@CALM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_CALM3_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_AL050207_5end |
EntrezGene: | CALM3 |
HGNC: | 1449 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 7.21e-12 | 32 |
telencephalon | 6.94e-11 | 34 |
regional part of telencephalon | 2.09e-10 | 32 |
brain grey matter | 1.57e-09 | 34 |
gray matter | 1.57e-09 | 34 |
regional part of forebrain | 2.02e-09 | 41 |
forebrain | 2.02e-09 | 41 |
anterior neural tube | 2.02e-09 | 41 |
future forebrain | 2.02e-09 | 41 |
neural tube | 5.59e-09 | 56 |
neural rod | 5.59e-09 | 56 |
future spinal cord | 5.59e-09 | 56 |
neural keel | 5.59e-09 | 56 |
regional part of nervous system | 7.11e-09 | 53 |
regional part of brain | 7.11e-09 | 53 |
central nervous system | 2.37e-08 | 81 |
cerebral cortex | 4.28e-08 | 25 |
pallium | 4.28e-08 | 25 |
neocortex | 6.16e-08 | 20 |
anatomical conduit | 1.25e-07 | 240 |
regional part of cerebral cortex | 5.37e-07 | 22 |
brain | 5.92e-07 | 68 |
future brain | 5.92e-07 | 68 |
urogenital ridge | 6.71e-07 | 11 |
corpus striatum | 7.55e-07 | 4 |
striatum | 7.55e-07 | 4 |
ventral part of telencephalon | 7.55e-07 | 4 |
future corpus striatum | 7.55e-07 | 4 |
nervous system | 8.35e-07 | 89 |