FFCP PHASE1:Hg19::chr1:6557441..6557457,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57449 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29105 | |||
|TSSclassifier=strong | |||
|UniProt=O94827 | |||
|association_with_transcript=0bp_to_ENST00000400915_5end | |||
|cluster_id=chr1:6557441..6557457,- | |||
|description=CAGE_peak_4_at_PLEKHG5_5end | |||
|id=chr1:6557441..6557457,- | |||
|ontology_enrichment_celltype=CL:0002321!2.72e-09!248;CL:0000220!5.14e-09!246;CL:0000359!2.78e-08!32;CL:0000183!8.19e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.84e-10;32!CL:0002368;8.48e-09;13!CL:0002595;5.82e-08;5!CL:0000244;3.84e-07;4!CL:0000731;3.84e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.17e-11,32;CL:0002368,7.51e-09,13;CL:0000187,1.73e-08,55;CL:0002595,2.45e-08,5;CL:0002321,3.05e-08,250;CL:0000680,9.79e-08,58;CL:0000056,9.79e-08,58;CL:0000355,9.79e-08,58;CL:0000244,2.73e-07,4;CL:0000731,2.73e-07,4;CL:0000192,3.32e-07,43;CL:0000514,3.32e-07,43;CL:0000393,4.58e-07,61;CL:0000211,4.58e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!3.11e-16!309;UBERON:0000119!1.63e-15!312;UBERON:0001637!6.20e-15!42;UBERON:0003509!6.20e-15!42;UBERON:0004572!6.20e-15!42;UBERON:0004111!9.19e-15!241;UBERON:0000025!1.08e-14!194;UBERON:0001981!1.68e-14!60;UBERON:0007500!1.68e-14!60;UBERON:0004537!1.68e-14!60;UBERON:0006965!1.68e-14!60;UBERON:0000055!2.83e-13!69;UBERON:0000468!4.01e-13!659;UBERON:0002049!1.11e-12!79;UBERON:0007798!1.11e-12!79;UBERON:0004872!1.17e-12!84;UBERON:0000477!1.55e-12!286;UBERON:0004573!1.79e-12!33;UBERON:0004571!1.79e-12!33;UBERON:0000475!7.02e-12!365;UBERON:0000467!1.33e-11!625;UBERON:0000480!1.97e-11!626;UBERON:0000922!3.03e-10!612;UBERON:0000481!2.98e-09!347;UBERON:0000153!7.28e-09!129;UBERON:0007811!7.28e-09!129;UBERON:0002050!9.32e-09!605;UBERON:0005423!9.32e-09!605;UBERON:0000033!9.41e-09!123;UBERON:0000923!1.71e-08!604;UBERON:0005291!1.71e-08!604;UBERON:0006598!1.71e-08!604;UBERON:0002532!1.71e-08!604;UBERON:0000956!1.78e-08!25;UBERON:0000203!1.78e-08!25;UBERON:0000955!1.94e-08!69;UBERON:0006238!1.94e-08!69;UBERON:0001869!3.21e-08!32;UBERON:0001049!5.94e-08!57;UBERON:0005068!5.94e-08!57;UBERON:0006241!5.94e-08!57;UBERON:0007135!5.94e-08!57;UBERON:0002619!6.88e-08!22;UBERON:0000924!7.29e-08!173;UBERON:0006601!7.29e-08!173;UBERON:0001017!7.94e-08!82;UBERON:0001009!7.98e-08!113;UBERON:0002346!8.44e-08!90;UBERON:0002616!1.03e-07!59;UBERON:0000073!1.06e-07!94;UBERON:0001016!1.06e-07!94;UBERON:0003914!1.14e-07!118;UBERON:0005743!1.32e-07!86;UBERON:0001893!1.50e-07!34;UBERON:0004121!1.88e-07!169;UBERON:0004535!2.11e-07!110;UBERON:0003075!2.33e-07!86;UBERON:0007284!2.33e-07!86;UBERON:0002020!2.97e-07!34;UBERON:0003528!2.97e-07!34;UBERON:0002791!3.66e-07!33;UBERON:0001950!4.86e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.47e-13;42!UBERON:0003509;1.47e-13;42!UBERON:0004572;1.47e-13;42!UBERON:0004573;6.02e-12;33!UBERON:0004571;6.02e-12;33!UBERON:0003834;5.82e-08;5!UBERON:0001533;5.82e-08;5!UBERON:0007500;7.56e-08;56!UBERON:0001981;7.56e-08;56!UBERON:0004537;7.56e-08;56!UBERON:0002619;2.64e-07;22!UBERON:0000956;3.40e-07;25!UBERON:0000203;3.40e-07;25!UBERON:0001950;5.31e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,5.31e-19,59;UBERON:0001981,5.31e-19,59;UBERON:0004537,5.31e-19,59;UBERON:0006965,5.31e-19,59;UBERON:0000483,5.44e-18,306;UBERON:0001637,1.11e-17,42;UBERON:0003509,1.11e-17,42;UBERON:0004572,1.11e-17,42;UBERON:0000119,1.43e-17,309;UBERON:0000025,2.49e-16,192;UBERON:0000055,3.58e-16,68;UBERON:0004872,8.80e-16,83;UBERON:0004111,5.75e-15,240;UBERON:0004573,4.29e-14,33;UBERON:0004571,4.29e-14,33;UBERON:0002049,1.03e-13,78;UBERON:0007798,1.03e-13,78;UBERON:0003914,1.99e-10,117;UBERON:0010371,1.74e-09,104;UBERON:0004535,3.57e-09,109;UBERON:0000486,4.16e-09,83;UBERON:0001009,1.15e-08,112;UBERON:0002050,1.78e-08,564;UBERON:0000922,1.93e-08,592;UBERON:0003834,2.45e-08,5;UBERON:0001533,2.45e-08,5;UBERON:0001134,1.26e-07,62;UBERON:0002036,1.26e-07,62;UBERON:0003082,1.26e-07,62;UBERON:0002619,1.42e-07,22;UBERON:0000956,1.90e-07,25;UBERON:0000203,1.90e-07,25;UBERON:0000923,1.95e-07,560;UBERON:0010316,1.95e-07,560;UBERON:0005291,1.95e-07,560;UBERON:0006598,1.95e-07,560;UBERON:0010317,1.95e-07,560;UBERON:0002532,1.95e-07,560;UBERON:0005423,2.15e-07,581;UBERON:0002385,3.39e-07,64;UBERON:0001015,3.39e-07,64;UBERON:0000383,3.39e-07,64;UBERON:0001950,3.70e-07,20 | |||
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| |||
|short_description=p4@PLEKHG5 | |||
}} |
Latest revision as of 22:52, 18 September 2015
Short description: | p4@PLEKHG5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLEKHG5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000400915_5end |
EntrezGene: | PLEKHG5 |
HGNC: | 29105 |
UniProt: | O94827 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.17e-11 | 32 |
respiratory epithelial cell | 7.51e-09 | 13 |
muscle cell | 1.73e-08 | 55 |
smooth muscle cell of the subclavian artery | 2.45e-08 | 5 |
embryonic cell | 3.05e-08 | 250 |
muscle precursor cell | 9.79e-08 | 58 |
myoblast | 9.79e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.79e-08 | 58 |
transitional epithelial cell | 2.73e-07 | 4 |
urothelial cell | 2.73e-07 | 4 |
smooth muscle cell | 3.32e-07 | 43 |
smooth muscle myoblast | 3.32e-07 | 43 |
electrically responsive cell | 4.58e-07 | 61 |
electrically active cell | 4.58e-07 | 61 |