FFCP PHASE1:Hg19::chr19:47823513..47823528,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:47823513..47823528,+ to FFCP PHASE1:Hg19::chr19:47823513..47823528,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=728 | |EntrezGene=728 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1338 | |HGNC=1338 | ||
|TSSclassifier=strong | |||
|UniProt=P21730 | |UniProt=P21730 | ||
|association_with_transcript=474bp_to_BT007358,CU679211,DQ891757,DQ894940,X57250_5end | |||
|cluster_id=chr19:47823513..47823528,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_3_at_C5AR1_5end | |||
|id=chr19:47823513..47823528,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.11e-92!42;CL:0000860!2.33e-85!45;CL:0000766!7.25e-85!76;CL:0002194!1.93e-78!63;CL:0000576!1.93e-78!63;CL:0000040!1.93e-78!63;CL:0000559!1.93e-78!63;CL:0002009!1.30e-75!65;CL:0000839!4.11e-72!70;CL:0000557!6.67e-71!71;CL:0000763!1.05e-54!112;CL:0000049!1.05e-54!112;CL:0000738!6.52e-46!140;CL:0002087!2.67e-40!119;CL:0002031!1.39e-34!124;CL:0000037!2.50e-34!172;CL:0000566!2.50e-34!172;CL:0002032!4.45e-32!165;CL:0000837!4.45e-32!165;CL:0000988!1.51e-31!182;CL:0002393!5.11e-19!9;CL:0002397!5.11e-19!9;CL:0000094!1.05e-10!8;CL:0002320!1.26e-09!365;CL:0000134!1.53e-09!358;CL:0000775!1.36e-08!3;CL:0000235!9.83e-08!10;CL:0000875!1.40e-07!3;CL:0002396!1.40e-07!3;CL:0000081!1.53e-07!11;CL:0000219!1.90e-07!390;CL:0000842!3.20e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.49e-110;33!CL:0002057;3.49e-110;33!CL:0000473;5.66e-97;39!CL:0000234;5.66e-97;39!CL:0000576;1.17e-64;48!CL:0000766;1.09e-50;69!CL:0000763;4.27e-23;100!CL:0002087;1.07e-15;104!CL:0000738;4.99e-15;136!CL:0000775;3.73e-13;3!CL:0000235;4.17e-10;6!CL:0000094;1.69e-08;8!CL:0000988;3.25e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.22e-133,48;CL:0000234,3.22e-133,48;CL:0000860,3.51e-125,42;CL:0002057,3.51e-125,42;CL:0002194,1.06e-104,59;CL:0000576,1.06e-104,59;CL:0000040,1.06e-104,59;CL:0000559,1.06e-104,59;CL:0000766,1.64e-103,72;CL:0002009,5.08e-101,61;CL:0000839,8.84e-93,66;CL:0000557,2.81e-91,67;CL:0000763,4.37e-66,108;CL:0000049,4.37e-66,108;CL:0000738,4.09e-53,136;CL:0002087,2.64e-52,115;CL:0002031,3.75e-47,120;CL:0002032,3.14e-41,161;CL:0000837,3.14e-41,161;CL:0000037,3.63e-41,168;CL:0000988,1.41e-38,177;CL:0000134,2.71e-14,354;CL:0002320,8.06e-14,361;CL:0000775,4.05e-13,3;CL:0000219,3.76e-12,386;CL:0002393,3.15e-10,9;CL:0002397,3.15e-10,9;CL:0000048,4.12e-10,427;CL:0000235,4.43e-10,6;CL:0000723,7.88e-10,433;CL:0000034,1.82e-09,441;CL:0000094,1.74e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-87;42!CL:0000049;1.30e-22;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.95e-68!102;UBERON:0003061!2.95e-68!102;UBERON:0002371!2.31e-61!80;UBERON:0002193!1.02e-60!112;UBERON:0001474!4.20e-56!86;UBERON:0004765!1.03e-47!101;UBERON:0001434!1.03e-47!101;UBERON:0002405!5.80e-42!115;UBERON:0003081!9.78e-25!216;UBERON:0002204!3.16e-23!167;UBERON:0000178!1.46e-10!15;UBERON:0000179!1.46e-10!15;UBERON:0000463!1.46e-10!15;UBERON:0002384!1.62e-09!375;UBERON:0000926!4.28e-09!448;UBERON:0004120!4.28e-09!448;UBERON:0006603!4.28e-09!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.27e-08;15!UBERON:0000179;3.27e-08;15!UBERON:0000463;3.27e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.17e-80,98;UBERON:0003061,8.17e-80,98;UBERON:0002371,1.66e-79,76;UBERON:0001474,4.46e-73,82;UBERON:0002193,1.40e-71,108;UBERON:0004765,8.02e-66,90;UBERON:0002405,2.03e-63,93;UBERON:0001434,2.28e-58,100;UBERON:0003081,1.41e-33,203;UBERON:0002204,2.67e-31,167;UBERON:0000926,4.54e-18,315;UBERON:0004120,4.54e-18,315;UBERON:0006603,4.54e-18,315;UBERON:0002384,3.57e-13,371;UBERON:0000178,2.95e-08,15;UBERON:0000179,2.95e-08,15;UBERON:0000463,2.95e-08,15 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.928896739896456,0,0,0,0,0,0,0.553995408531877,2.00544447470142,0.434021741431704,0.671746422719773,0,0,5.23433659606433,3.40088349319928,3.63876091781724,9.76201955003875,9.04569353648017,5.26500830521676,5.75384784644301,3.07392847834921,2.83778675866302,2.41321976515633,5.16387746867061,2.70852973188684,13.3652061075249,5.73102915121476,4.04502272001152,14.3859429414324,3.85114832491312,7.67204550958849,5.27762080298746,2.79249120670285,1.27867425159808,6.96502172708602,3.40431134814684,6.22822248995575,5.27622197039161,2.08593167368081,1.52032191293582,4.84319602106695,1.84138817993782,3.16462387440884,2.95757400836718,2.12604299965044,0.419317291016752,1.01095768031846,1.05123824989054,1.12507910687956,1.42506371870624,3.58050018958362,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.702012795417713,1.63494278517601,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.00902836572851,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2311334549965,89.7484377612075,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,2.80428461064202,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,0,2.84823593587081,0.238231775457789,1.64544909234478,0,1.08006287447623,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0.13223260174269,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.928896739896456,0,0,0,0,0,0,0.553995408531877,2.00544447470142,0.434021741431704,0.671746422719773,0,0,5.23433659606433,3.40088349319928,3.63876091781724,9.76201955003875,9.04569353648017,5.26500830521676,5.75384784644301,3.07392847834921,2.83778675866302,2.41321976515633,5.16387746867061,2.70852973188684,13.3652061075249,5.73102915121476,4.04502272001152,14.3859429414324,3.85114832491312,7.67204550958849,5.27762080298746,2.79249120670285,1.27867425159808,6.96502172708602,3.40431134814684,6.22822248995575,5.27622197039161,2.08593167368081,1.52032191293582,4.84319602106695,1.84138817993782,3.16462387440884,2.95757400836718,2.12604299965044,0.419317291016752,1.01095768031846,1.05123824989054,1.12507910687956,1.42506371870624,3.58050018958362,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.702012795417713,1.63494278517601,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.00902836572851,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2311334549965,89.7484377612075,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,2.80428461064202,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,0,2.84823593587081,0.238231775457789,1.64544909234478,0,1.08006287447623,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0.13223260174269,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@C5AR1 | |||
}} | }} |
Latest revision as of 23:24, 18 September 2015
Short description: | p3@C5AR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C5AR1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 474bp_to_BT007358, CU679211, DQ891757, DQ894940, X57250_5end |
EntrezGene: | C5AR1 |
HGNC: | 1338 |
UniProt: | P21730 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.17e-80 | 98 |
blood island | 8.17e-80 | 98 |
bone marrow | 1.66e-79 | 76 |
bone element | 4.46e-73 | 82 |
hemolymphoid system | 1.40e-71 | 108 |
skeletal element | 8.02e-66 | 90 |
immune system | 2.03e-63 | 93 |
skeletal system | 2.28e-58 | 100 |
lateral plate mesoderm | 1.41e-33 | 203 |
musculoskeletal system | 2.67e-31 | 167 |
mesoderm | 4.54e-18 | 315 |
mesoderm-derived structure | 4.54e-18 | 315 |
presumptive mesoderm | 4.54e-18 | 315 |
connective tissue | 3.57e-13 | 371 |
blood | 2.95e-08 | 15 |
haemolymphatic fluid | 2.95e-08 | 15 |
organism substance | 2.95e-08 | 15 |