FFCP PHASE1:Hg19::chr6:44225231..44225280,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347734 | |EntrezGene=347734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16872 | |HGNC=16872 | ||
|TSSclassifier=strong | |||
|UniProt=B4DDM2,F5H7Y9 | |UniProt=B4DDM2,F5H7Y9 | ||
|association_with_transcript=0bp_to_ENST00000537814,ENST00000538577_5end | |association_with_transcript=0bp_to_ENST00000537814,ENST00000538577_5end | ||
|cluster_id=chr6:44225231..44225280,- | |||
|coexpression_cluster_id=C887 | |||
|description=CAGE_peak_1_at_SLC35B2_5end | |description=CAGE_peak_1_at_SLC35B2_5end | ||
|id=chr6:44225231..44225280,- | |id=chr6:44225231..44225280,- | ||
|ontology_enrichment_celltype=CL:0000055!3.36e-31!180;CL:0000220!1.18e-27!246;CL:0002321!5.42e-27!248;CL:0000548!9.22e-26!679;CL:0000004!9.22e-26!679;CL:0000255!9.22e-26!679;CL:0000012!1.02e-24!682;CL:0000222!1.23e-19!119;CL:0000066!1.23e-19!254;CL:0000183!1.59e-17!59;CL:0000144!1.71e-17!625;CL:0002371!1.03e-16!591;CL:0000192!1.34e-16!42;CL:0000514!1.34e-16!42;CL:0000680!2.48e-16!57;CL:0000056!2.48e-16!57;CL:0000355!2.48e-16!57;CL:0000187!1.59e-15!54;CL:0000393!1.86e-13!60;CL:0000211!1.86e-13!60;CL:0000003!2.09e-13!722;CL:0000359!5.88e-13!32;CL:0000057!3.90e-11!75;CL:1000449!1.93e-07!16;CL:1000497!4.96e-07!18;CL:0002518!4.96e-07!18;CL:0000063!5.63e-07!578 | |ontology_enrichment_celltype=CL:0000055!3.36e-31!180;CL:0000220!1.18e-27!246;CL:0002321!5.42e-27!248;CL:0000548!9.22e-26!679;CL:0000004!9.22e-26!679;CL:0000255!9.22e-26!679;CL:0000012!1.02e-24!682;CL:0000222!1.23e-19!119;CL:0000066!1.23e-19!254;CL:0000183!1.59e-17!59;CL:0000144!1.71e-17!625;CL:0002371!1.03e-16!591;CL:0000192!1.34e-16!42;CL:0000514!1.34e-16!42;CL:0000680!2.48e-16!57;CL:0000056!2.48e-16!57;CL:0000355!2.48e-16!57;CL:0000187!1.59e-15!54;CL:0000393!1.86e-13!60;CL:0000211!1.86e-13!60;CL:0000003!2.09e-13!722;CL:0000359!5.88e-13!32;CL:0000057!3.90e-11!75;CL:1000449!1.93e-07!16;CL:1000497!4.96e-07!18;CL:0002518!4.96e-07!18;CL:0000063!5.63e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.49e-12;32!CL:0000192;4.98e-12;43!CL:0000187;1.54e-08;55!CL:0000134;1.38e-07;55!CL:1000449;1.80e-07;15!CL:1000497;4.98e-07;17!CL:0002518;4.98e-07;17!CL:0000393;6.94e-07;61!CL:0000211;6.94e-07;61!CL:0000048;7.97e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.55e-27,250;CL:0000222,1.00e-19,121;CL:0000066,1.66e-19,253;CL:0000192,1.33e-16,43;CL:0000514,1.33e-16,43;CL:0000680,2.20e-16,58;CL:0000056,2.20e-16,58;CL:0000355,2.20e-16,58;CL:0000187,1.42e-15,55;CL:0000393,1.57e-13,61;CL:0000211,1.57e-13,61;CL:0000359,5.88e-13,32;CL:0000057,2.43e-11,76;CL:1000449,1.82e-07,15;CL:1000497,5.09e-07,17;CL:0002518,5.09e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;4.98e-12;43!CL:0000355;1.18e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.96e-21!143;UBERON:0002100!2.01e-20!216;UBERON:0003104!5.55e-19!238;UBERON:0009142!5.55e-19!238;UBERON:0000486!5.39e-18!82;UBERON:0000914!7.18e-17!83;UBERON:0002329!7.18e-17!83;UBERON:0003077!7.18e-17!83;UBERON:0003059!7.18e-17!83;UBERON:0007282!7.18e-17!83;UBERON:0009618!7.18e-17!83;UBERON:0007285!7.18e-17!83;UBERON:0003914!1.58e-16!118;UBERON:0004290!1.04e-15!70;UBERON:0000490!2.54e-15!138;UBERON:0001134!7.41e-14!61;UBERON:0002036!7.41e-14!61;UBERON:0003082!7.41e-14!61;UBERON:0000475!1.47e-13!365;UBERON:0000481!6.35e-13!347;UBERON:0000119!8.74e-13!312;UBERON:0002385!9.61e-13!63;UBERON:0001015!9.61e-13!63;UBERON:0000383!9.61e-13!63;UBERON:0000483!2.01e-12!309;UBERON:0002049!2.96e-12!79;UBERON:0007798!2.96e-12!79;UBERON:0001637!4.60e-12!42;UBERON:0003509!4.60e-12!42;UBERON:0004572!4.60e-12!42;UBERON:0004872!3.58e-11!84;UBERON:0000055!1.52e-10!69;UBERON:0001981!3.06e-10!60;UBERON:0007500!3.06e-10!60;UBERON:0004537!3.06e-10!60;UBERON:0006965!3.06e-10!60;UBERON:0004573!9.22e-10!33;UBERON:0004571!9.22e-10!33;UBERON:0009569!9.30e-10!113;UBERON:0000477!5.09e-08!286;UBERON:0006554!6.64e-08!44;UBERON:0004211!1.93e-07!16;UBERON:0001285!1.93e-07!16;UBERON:0007684!1.93e-07!16;UBERON:0003220!1.93e-07!16;UBERON:0004208!1.93e-07!16;UBERON:0003102!2.65e-07!95;UBERON:0001008!3.13e-07!45;UBERON:0001048!4.36e-07!168;UBERON:0000926!5.58e-07!448;UBERON:0004120!5.58e-07!448;UBERON:0006603!5.58e-07!448;UBERON:0006555!5.83e-07!17;UBERON:0005103!5.83e-07!17;UBERON:0000083!5.83e-07!17;UBERON:0009201!5.83e-07!17;UBERON:0004819!5.83e-07!17;UBERON:0006553!5.83e-07!17;UBERON:0003074!5.83e-07!17;UBERON:0003060!5.83e-07!17;UBERON:0004535!6.84e-07!110;UBERON:0001737!8.82e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.14e-09;33!UBERON:0004571;8.14e-09;33!UBERON:0001637;1.25e-08;42!UBERON:0003509;1.25e-08;42!UBERON:0004572;1.25e-08;42!UBERON:0003914;3.40e-08;74!UBERON:0006555;1.80e-07;15!UBERON:0004819;1.80e-07;15!UBERON:0001285;1.80e-07;15!UBERON:0007684;1.80e-07;15!UBERON:0001737;8.80e-07;9!UBERON:0001557;8.80e-07;9 | |||
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| ||
|short_description=p1@SLC35B2 | |short_description=p1@SLC35B2 | ||
}} | }} |
Latest revision as of 00:14, 19 September 2015
Short description: | p1@SLC35B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC35B2_5end |
Coexpression cluster: | C887_Mesenchymal_Alveolar_Smooth_Renal_Fibroblast_leiomyoma_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000537814, ENST00000538577_5end |
EntrezGene: | SLC35B2 |
HGNC: | 16872 |
UniProt: | B4DDM2F5H7Y9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.55e-27 | 250 |
mesodermal cell | 1.00e-19 | 121 |
epithelial cell | 1.66e-19 | 253 |
smooth muscle cell | 1.33e-16 | 43 |
smooth muscle myoblast | 1.33e-16 | 43 |
muscle precursor cell | 2.20e-16 | 58 |
myoblast | 2.20e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.20e-16 | 58 |
muscle cell | 1.42e-15 | 55 |
electrically responsive cell | 1.57e-13 | 61 |
electrically active cell | 1.57e-13 | 61 |
vascular associated smooth muscle cell | 5.88e-13 | 32 |
fibroblast | 2.43e-11 | 76 |
epithelial cell of nephron | 1.82e-07 | 15 |
kidney cell | 5.09e-07 | 17 |
kidney epithelial cell | 5.09e-07 | 17 |