FFCP PHASE1:Hg19::chr4:83351124..83351222,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:83351124..83351222,- to FFCP PHASE1:Hg19::chr4:83351124..83351222,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9987 | |EntrezGene=9987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5037 | |HGNC=5037 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=71bp_to_ENST00000502762_5end | |||
|cluster_id=chr4:83351124..83351222,- | |||
|coexpression_cluster_id=C443 | |||
|description=CAGE_peak_4_at_HNRPDL_5end | |||
|id=chr4:83351124..83351222,- | |||
|ontology_enrichment_celltype=CL:0000037!1.19e-33!172;CL:0000566!1.19e-33!172;CL:0000988!4.21e-33!182;CL:0002032!5.34e-30!165;CL:0000837!5.34e-30!165;CL:0000738!2.80e-29!140;CL:0002087!1.66e-23!119;CL:0002031!2.64e-23!124;CL:0000838!8.40e-23!52;CL:0000542!2.18e-22!53;CL:0000051!2.18e-22!53;CL:0000791!3.29e-12!18;CL:0000789!3.29e-12!18;CL:0002420!3.29e-12!18;CL:0002419!3.29e-12!18;CL:0000790!3.29e-12!18;CL:0000084!3.33e-12!25;CL:0000827!3.33e-12!25;CL:0000763!9.29e-11!112;CL:0000049!9.29e-11!112;CL:0000945!6.61e-10!24;CL:0000826!6.61e-10!24;CL:0000236!2.94e-08!14;CL:0000625!4.21e-08!11;CL:0000557!8.37e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000542;8.03e-14;53!CL:0000791;2.51e-12;18!CL:0000789;2.51e-12;18!CL:0002419;2.51e-12;18!CL:0000084;2.87e-12;25!CL:0000945;1.00e-09;24!CL:0000236;1.50e-08;13!CL:0000625;3.55e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.45e-33,168;CL:0000988,4.83e-33,177;CL:0002032,6.61e-30,161;CL:0000837,6.61e-30,161;CL:0000738,2.85e-29,136;CL:0002087,1.65e-23,115;CL:0002031,2.81e-23,120;CL:0000838,8.37e-23,52;CL:0000542,2.17e-22,53;CL:0000051,2.17e-22,53;CL:0000791,3.28e-12,18;CL:0000789,3.28e-12,18;CL:0002420,3.28e-12,18;CL:0002419,3.28e-12,18;CL:0000790,3.28e-12,18;CL:0000084,3.33e-12,25;CL:0000827,3.33e-12,25;CL:0000763,1.28e-10,108;CL:0000049,1.28e-10,108;CL:0000945,6.59e-10,24;CL:0000826,6.59e-10,24;CL:0000236,2.94e-08,14;CL:0000625,4.21e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;8.03e-14;53!CL:0000790;2.51e-12;18 | |||
|ontology_enrichment_disease=DOID:2531!1.10e-08!51;DOID:0060083!1.10e-08!51;DOID:1240!1.65e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.10e-08,51;DOID:0060083,1.10e-08,51;DOID:1240,1.65e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!6.79e-12!112;UBERON:0002390!1.38e-11!102;UBERON:0003061!1.38e-11!102;UBERON:0000178!2.34e-07!15;UBERON:0000179!2.34e-07!15;UBERON:0000463!2.34e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.28e-07;15!UBERON:0000179;2.28e-07;15!UBERON:0000463;2.28e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.10e-12,108;UBERON:0002390,1.71e-11,98;UBERON:0003061,1.71e-11,98;UBERON:0002405,2.13e-07,93;UBERON:0000178,2.34e-07,15;UBERON:0000179,2.34e-07,15;UBERON:0000463,2.34e-07,15 | |||
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| ||
|short_description=p4@HNRPDL | |||
}} | }} |
Latest revision as of 00:45, 19 September 2015
Short description: | p4@HNRPDL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HNRPDL_5end |
Coexpression cluster: | C443_CD4_CD8_Natural_Eosinophils_Neutrophils_Peripheral_blood |
Association with transcript: | 71bp_to_ENST00000502762_5end |
EntrezGene: | HNRPDL |
HGNC: | 5037 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.45e-33 | 168 |
hematopoietic cell | 4.83e-33 | 177 |
hematopoietic oligopotent progenitor cell | 6.61e-30 | 161 |
hematopoietic multipotent progenitor cell | 6.61e-30 | 161 |
leukocyte | 2.85e-29 | 136 |
nongranular leukocyte | 1.65e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 2.81e-23 | 120 |
lymphoid lineage restricted progenitor cell | 8.37e-23 | 52 |
lymphocyte | 2.17e-22 | 53 |
common lymphoid progenitor | 2.17e-22 | 53 |
mature alpha-beta T cell | 3.28e-12 | 18 |
alpha-beta T cell | 3.28e-12 | 18 |
immature T cell | 3.28e-12 | 18 |
mature T cell | 3.28e-12 | 18 |
immature alpha-beta T cell | 3.28e-12 | 18 |
T cell | 3.33e-12 | 25 |
pro-T cell | 3.33e-12 | 25 |
myeloid cell | 1.28e-10 | 108 |
common myeloid progenitor | 1.28e-10 | 108 |
lymphocyte of B lineage | 6.59e-10 | 24 |
pro-B cell | 6.59e-10 | 24 |
B cell | 2.94e-08 | 14 |
CD8-positive, alpha-beta T cell | 4.21e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.10e-12 | 108 |
hematopoietic system | 1.71e-11 | 98 |
blood island | 1.71e-11 | 98 |
immune system | 2.13e-07 | 93 |
blood | 2.34e-07 | 15 |
haemolymphatic fluid | 2.34e-07 | 15 |
organism substance | 2.34e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.10e-08 | 51 |
immune system cancer | 1.10e-08 | 51 |
leukemia | 1.65e-07 | 39 |