FFCP PHASE1:Hg19::chr18:22208164..22208171,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=729950 | |EntrezGene=729950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000500155,NR_040033,uc002kvj.1_5end | |association_with_transcript=18bp_to_ENST00000500155,NR_040033,uc002kvj.1_5end | ||
|cluster_id=chr18:22208164..22208171,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_1_at_LOC729950_5end | |description=CAGE_peak_1_at_LOC729950_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.40e-147;3!UBERON:0010227;3.99e-50;1 | |ontology_enrichment_development_v019=UBERON:0006215;5.40e-147;3!UBERON:0010227;3.99e-50;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!2.95e-22!12;UBERON:0002028!2.95e-22!12;UBERON:0007277!2.95e-22!12;UBERON:0004732!1.64e-20!13;UBERON:0003076!1.02e-17!15;UBERON:0003057!1.02e-17!15;UBERON:0000341!4.65e-16!2;UBERON:0002680!8.58e-14!9;UBERON:0001895!8.58e-14!9;UBERON:0010092!8.58e-14!9;UBERON:0002037!2.48e-12!6;UBERON:0006215!2.48e-12!6;UBERON:0001723!4.43e-11!3;UBERON:0001033!4.43e-11!3;UBERON:0010056!4.43e-11!3;UBERON:0001896!5.98e-11!3;UBERON:0005290!5.98e-11!3;UBERON:0010096!5.98e-11!3;UBERON:0007023!4.22e-10!115;UBERON:0002079!3.58e-09!1;UBERON:0001736!5.28e-09!1;UBERON:0006298!5.28e-09!1;UBERON:0002298!7.89e-09!8;UBERON:0000153!1.37e-08!129;UBERON:0007811!1.37e-08!129;UBERON:0000955!3.79e-07!69;UBERON:0006238!3.79e-07!69 | |ontology_enrichment_uberon=UBERON:0004733!2.95e-22!12;UBERON:0002028!2.95e-22!12;UBERON:0007277!2.95e-22!12;UBERON:0004732!1.64e-20!13;UBERON:0003076!1.02e-17!15;UBERON:0003057!1.02e-17!15;UBERON:0000341!4.65e-16!2;UBERON:0002680!8.58e-14!9;UBERON:0001895!8.58e-14!9;UBERON:0010092!8.58e-14!9;UBERON:0002037!2.48e-12!6;UBERON:0006215!2.48e-12!6;UBERON:0001723!4.43e-11!3;UBERON:0001033!4.43e-11!3;UBERON:0010056!4.43e-11!3;UBERON:0001896!5.98e-11!3;UBERON:0005290!5.98e-11!3;UBERON:0010096!5.98e-11!3;UBERON:0007023!4.22e-10!115;UBERON:0002079!3.58e-09!1;UBERON:0001736!5.28e-09!1;UBERON:0006298!5.28e-09!1;UBERON:0002298!7.89e-09!8;UBERON:0000153!1.37e-08!129;UBERON:0007811!1.37e-08!129;UBERON:0000955!3.79e-07!69;UBERON:0006238!3.79e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.31e-74;6!UBERON:0002079;3.99e-50;1!UBERON:0002680;6.62e-50;9!UBERON:0001895;6.62e-50;9!UBERON:0004733;9.76e-38;12!UBERON:0002028;9.76e-38;12!UBERON:0004732;6.32e-35;13!UBERON:0002081;7.14e-26;2!UBERON:0004151;9.45e-18;3!UBERON:0000073;8.01e-07;53!UBERON:0002616;8.01e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0002037;3.31e-74;6!UBERON:0002079;3.99e-50;1!UBERON:0002680;6.62e-50;9!UBERON:0001895;6.62e-50;9!UBERON:0004733;9.76e-38;12!UBERON:0002028;9.76e-38;12!UBERON:0004732;6.32e-35;13!UBERON:0002081;7.14e-26;2!UBERON:0004151;9.45e-18;3!UBERON:0000073;8.01e-07;53!UBERON:0002616;8.01e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.31e-74,6;UBERON:0006215,3.31e-74,6;UBERON:0002079,3.99e-50,1;UBERON:0002680,6.62e-50,9;UBERON:0001895,6.62e-50,9;UBERON:0010092,6.62e-50,9;UBERON:0004733,9.76e-38,12;UBERON:0002028,9.76e-38,12;UBERON:0007277,9.76e-38,12;UBERON:0004732,6.32e-35,13;UBERON:0003076,2.01e-30,15;UBERON:0003057,2.01e-30,15;UBERON:0002081,7.14e-26,2;UBERON:0010227,7.14e-26,2;UBERON:0004151,9.46e-18,3;UBERON:0000073,3.71e-09,53;UBERON:0002616,3.71e-09,53;UBERON:0001049,1.02e-08,56;UBERON:0005068,1.02e-08,56;UBERON:0006241,1.02e-08,56;UBERON:0007135,1.02e-08,56;UBERON:0007023,8.86e-08,114;UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68;UBERON:0010314,8.99e-07,132 | |||
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|short_description=p1@LOC729950 | |short_description=p1@LOC729950 | ||
}} | }} |
Latest revision as of 01:18, 19 September 2015
Short description: | p1@LOC729950 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC729950_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 18bp_to_ENST00000500155, NR_040033, uc002kvj.1_5end |
EntrezGene: | LOC729950 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.31e-74 | 6 |
rhombic lip | 3.31e-74 | 6 |
left cardiac atrium | 3.99e-50 | 1 |
regional part of metencephalon | 6.62e-50 | 9 |
metencephalon | 6.62e-50 | 9 |
future metencephalon | 6.62e-50 | 9 |
segmental subdivision of hindbrain | 9.76e-38 | 12 |
hindbrain | 9.76e-38 | 12 |
presumptive hindbrain | 9.76e-38 | 12 |
segmental subdivision of nervous system | 6.32e-35 | 13 |
posterior neural tube | 2.01e-30 | 15 |
chordal neural plate | 2.01e-30 | 15 |
cardiac atrium | 7.14e-26 | 2 |
future cardiac atrium | 7.14e-26 | 2 |
cardiac chamber | 9.46e-18 | 3 |
regional part of nervous system | 3.71e-09 | 53 |
regional part of brain | 3.71e-09 | 53 |
neural tube | 1.02e-08 | 56 |
neural rod | 1.02e-08 | 56 |
future spinal cord | 1.02e-08 | 56 |
neural keel | 1.02e-08 | 56 |
adult organism | 8.86e-08 | 114 |
brain | 2.97e-07 | 68 |
future brain | 2.97e-07 | 68 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |