FFCP PHASE1:Hg19::chr5:86563636..86563712,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:86563636..86563712,+
|short_description=p1@RASA1
|description=CAGE_peak_1_at_RASA1_5end
|association_with_transcript=0bp_to_ENST00000274376,ENST00000515800...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5921 | |EntrezGene=5921 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9871 | |HGNC=9871 | ||
|TSSclassifier=strong | |||
|UniProt=P20936,Q68CU6 | |UniProt=P20936,Q68CU6 | ||
|association_with_transcript=0bp_to_ENST00000274376,ENST00000515800_5end | |||
|cluster_id=chr5:86563636..86563712,+ | |||
|description=CAGE_peak_1_at_RASA1_5end | |||
|id=chr5:86563636..86563712,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.23e-10!22;UBERON:0002780!2.22e-10!41;UBERON:0001890!2.22e-10!41;UBERON:0006240!2.22e-10!41;UBERON:0000956!2.55e-10!25;UBERON:0000203!2.55e-10!25;UBERON:0001893!3.37e-10!34;UBERON:0001869!5.03e-10!32;UBERON:0003080!5.49e-10!42;UBERON:0002020!6.14e-10!34;UBERON:0003528!6.14e-10!34;UBERON:0001950!7.84e-10!20;UBERON:0002791!9.32e-10!33;UBERON:0000468!3.39e-09!659;UBERON:0000467!3.77e-09!625;UBERON:0000480!7.08e-09!626;UBERON:0001049!8.09e-09!57;UBERON:0005068!8.09e-09!57;UBERON:0006241!8.09e-09!57;UBERON:0007135!8.09e-09!57;UBERON:0001017!1.77e-08!82;UBERON:0002616!1.88e-08!59;UBERON:0000955!1.96e-08!69;UBERON:0006238!1.96e-08!69;UBERON:0000033!3.63e-08!123;UBERON:0005743!5.88e-08!86;UBERON:0004121!8.29e-08!169;UBERON:0000153!3.02e-07!129;UBERON:0007811!3.02e-07!129;UBERON:0000924!3.41e-07!173;UBERON:0006601!3.41e-07!173;UBERON:0000073!5.05e-07!94;UBERON:0001016!5.05e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.14e-10;22!UBERON:0000956;2.34e-10;25!UBERON:0000203;2.34e-10;25!UBERON:0001950;7.10e-10;20!UBERON:0001869;4.31e-09;32!UBERON:0002791;6.11e-09;32!UBERON:0001893;6.14e-09;34!UBERON:0003528;9.40e-09;34!UBERON:0002020;9.40e-09;34!UBERON:0002780;1.16e-07;41!UBERON:0001890;1.16e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.23e-10,22;UBERON:0002780,2.22e-10,41;UBERON:0001890,2.22e-10,41;UBERON:0003080,2.22e-10,41;UBERON:0006240,2.22e-10,41;UBERON:0000956,2.55e-10,25;UBERON:0000203,2.55e-10,25;UBERON:0001893,3.37e-10,34;UBERON:0001869,5.03e-10,32;UBERON:0003528,6.14e-10,34;UBERON:0002020,6.14e-10,34;UBERON:0001950,7.84e-10,20;UBERON:0002791,8.32e-10,32;UBERON:0000073,2.07e-09,53;UBERON:0002616,2.07e-09,53;UBERON:0001049,4.23e-09,56;UBERON:0005068,4.23e-09,56;UBERON:0006241,4.23e-09,56;UBERON:0007135,4.23e-09,56;UBERON:0001017,1.10e-08,81;UBERON:0000955,1.14e-08,68;UBERON:0006238,1.14e-08,68;UBERON:0001016,1.26e-07,89;UBERON:0002050,2.32e-07,564;UBERON:0004121,4.76e-07,171;UBERON:0000924,4.76e-07,171;UBERON:0006601,4.76e-07,171 | |||
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| ||
|short_description=p1@RASA1 | |||
}} | }} |
Latest revision as of 02:05, 19 September 2015
Short description: | p1@RASA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000274376, ENST00000515800_5end |
EntrezGene: | RASA1 |
HGNC: | 9871 |
UniProt: | P20936Q68CU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.23e-10 | 22 |
regional part of forebrain | 2.22e-10 | 41 |
forebrain | 2.22e-10 | 41 |
anterior neural tube | 2.22e-10 | 41 |
future forebrain | 2.22e-10 | 41 |
cerebral cortex | 2.55e-10 | 25 |
pallium | 2.55e-10 | 25 |
telencephalon | 3.37e-10 | 34 |
cerebral hemisphere | 5.03e-10 | 32 |
brain grey matter | 6.14e-10 | 34 |
gray matter | 6.14e-10 | 34 |
neocortex | 7.84e-10 | 20 |
regional part of telencephalon | 8.32e-10 | 32 |
regional part of nervous system | 2.07e-09 | 53 |
regional part of brain | 2.07e-09 | 53 |
neural tube | 4.23e-09 | 56 |
neural rod | 4.23e-09 | 56 |
future spinal cord | 4.23e-09 | 56 |
neural keel | 4.23e-09 | 56 |
central nervous system | 1.10e-08 | 81 |
brain | 1.14e-08 | 68 |
future brain | 1.14e-08 | 68 |
nervous system | 1.26e-07 | 89 |
embryonic structure | 2.32e-07 | 564 |
ectoderm-derived structure | 4.76e-07 | 171 |
ectoderm | 4.76e-07 | 171 |
presumptive ectoderm | 4.76e-07 | 171 |