FFCP PHASE1:Hg19::chr6:45983581..45983603,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53405 | |EntrezGene=53405 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13517 | |HGNC=13517 | ||
|TSSclassifier=strong | |||
|UniProt=Q53G01,Q9NZA1,Q8NBY3 | |UniProt=Q53G01,Q9NZA1,Q8NBY3 | ||
|association_with_transcript=0bp_to_ENST00000339561,NM_016929,uc003oxu.3,uc003oxx.2_5end | |association_with_transcript=0bp_to_ENST00000339561,NM_016929,uc003oxu.3,uc003oxx.2_5end | ||
|cluster_id=chr6:45983581..45983603,- | |||
|description=CAGE_peak_1_at_CLIC5_5end | |description=CAGE_peak_1_at_CLIC5_5end | ||
|id=chr6:45983581..45983603,- | |id=chr6:45983581..45983603,- | ||
|ontology_enrichment_celltype=CL:0000791!1.23e-07!18;CL:0000789!1.23e-07!18;CL:0002420!1.23e-07!18;CL:0002419!1.23e-07!18;CL:0000790!1.23e-07!18 | |ontology_enrichment_celltype=CL:0000791!1.23e-07!18;CL:0000789!1.23e-07!18;CL:0002420!1.23e-07!18;CL:0002419!1.23e-07!18;CL:0000790!1.23e-07!18 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.09e-07,18;CL:0000789,9.09e-07,18;CL:0002420,9.09e-07,18;CL:0002419,9.09e-07,18;CL:0000790,9.09e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006603;7.78e-07;65!UBERON:0004872;8.39e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-50!115;UBERON:0001049!1.90e-14!57;UBERON:0005068!1.90e-14!57;UBERON:0006241!1.90e-14!57;UBERON:0007135!1.90e-14!57;UBERON:0003080!3.37e-13!42;UBERON:0002780!1.28e-12!41;UBERON:0001890!1.28e-12!41;UBERON:0006240!1.28e-12!41;UBERON:0002616!1.11e-11!59;UBERON:0001893!2.33e-11!34;UBERON:0002020!2.48e-11!34;UBERON:0003528!2.48e-11!34;UBERON:0002791!7.16e-11!33;UBERON:0001869!7.28e-11!32;UBERON:0000955!3.97e-10!69;UBERON:0006238!3.97e-10!69;UBERON:0003075!1.21e-09!86;UBERON:0007284!1.21e-09!86;UBERON:0002619!1.38e-09!22;UBERON:0001017!9.97e-09!82;UBERON:0001950!1.12e-08!20;UBERON:0002346!1.50e-08!90;UBERON:0005743!2.15e-08!86;UBERON:0000956!1.08e-07!25;UBERON:0000203!1.08e-07!25;UBERON:0003056!2.65e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.53e-15;114!UBERON:0001869;2.09e-11;32!UBERON:0001893;2.13e-11;34!UBERON:0002619;3.11e-11;22!UBERON:0001950;3.51e-11;20!UBERON:0003528;4.04e-11;34!UBERON:0002020;4.04e-11;34!UBERON:0002791;1.62e-10;32!UBERON:0000956;2.58e-09;25!UBERON:0000203;2.58e-09;25!UBERON:0002780;1.16e-08;41!UBERON:0001890;1.16e-08;41!UBERON:0000160;1.77e-07;17!UBERON:0000073;3.28e-07;53!UBERON:0002616;3.28e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.68e-54,114;UBERON:0001049,9.23e-14,56;UBERON:0005068,9.23e-14,56;UBERON:0006241,9.23e-14,56;UBERON:0007135,9.23e-14,56;UBERON:0000073,4.23e-13,53;UBERON:0002616,4.23e-13,53;UBERON:0001869,1.34e-12,32;UBERON:0001893,1.87e-12,34;UBERON:0003528,2.02e-12,34;UBERON:0002020,2.02e-12,34;UBERON:0002780,6.82e-12,41;UBERON:0001890,6.82e-12,41;UBERON:0003080,6.82e-12,41;UBERON:0006240,6.82e-12,41;UBERON:0002619,2.15e-11,22;UBERON:0002791,2.16e-11,32;UBERON:0001950,2.44e-11,20;UBERON:0000956,1.89e-09,25;UBERON:0000203,1.89e-09,25;UBERON:0003075,2.05e-09,82;UBERON:0007284,2.05e-09,82;UBERON:0000955,2.67e-09,68;UBERON:0006238,2.67e-09,68;UBERON:0002346,1.72e-08,86;UBERON:0001017,3.74e-08,81;UBERON:0000160,1.97e-07,17;UBERON:0011216,3.65e-07,223;UBERON:0005409,4.11e-07,25;UBERON:0003103,8.71e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.09340350391728,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0.393364276848904,2.30297638858328,0.464448369948228,0,0,0,0,0,0,0,0.802177789880567,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0,0.377875943688809,0,0.697287110717054,0.822335776043652,0,0,0.256160706529101,0,0,0.645484683583826,0,0.188242339542605,0.545812300115692,0.224723484445085,0,0.320929027076094,0,0,0.797854630486527,0.426224750532694,0.290209238628584,0,0,0,0,0.217188844705117,1.21079900526674,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,3.51992488922645,1.09227722252426,1.77901850772711,0,0.400395987036012,0,1.32208974556972,0.954053754535364,0,1.17447437874188,0,0,0.560508562981536,0,1.37696839079683,1.17903228824749,1.43921049299656,1.17030546773475,0.651844533267181,0.473447805734733,0,2.1167986808183,1.47302953737419,1.10766947291811,1.62482318259009,1.0247305578054,1.8208308658383,1.31550323682941,0.829050053357545,0.869409257205157,0.14828656316206,0,0,3.51258962362455,1.53288197440768,3.09264700934367,3.79529538029254,1.59282707162048,2.60433381542567,2.85135613334512,1.05402583354441,1.53583933385302,2.49861453104692,0.947109008176067,0.821127996921047,3.62892137804518,1.60464117470104,1.30341963494519,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,45.3842496599574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,1.31780417436063,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5172252503473,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,1.07813787429759,1.41177339907723,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0.620304078368662,0.431428401637234,1.49418580924822,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,31.7860352425966,0.200506470303285,0,0,0,0,3.15839729035188,0.847168708148562,6.27479815341484,2.92278449306521,2.63879072232189,0,0,0,0,1.62567862526312,3.01013864312912,0.764628819135115,9.97291210714469,0.223874754722178,0,0,0,0,0,47.7079883928954,1.73981983154852,1.07262349896764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.743508618684,0,0,0,0,0.507447609232169,0,1.13929437434833,0.714695326373367,0.822724546172388,0,1.08006287447623,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,1.4098700508785,1.30998378285754,20.2181287395214,0,0.111443384277478,0,2.14870036263921,6.83018765915069,4.60741053148848,2.98244294329889,1.1253553312841,0,7.08656659175066,27.0240522403832,3.98495976502139,10.7750727057148,0,0.102268682502155,0,0,0.359473404589307,0.179021174675609,0,3.05794557474494,0,0,1.93866549219044,2.41197055220813,0,0,0,4.34999745260876,0.1137934482855,4.57656570526979,0,0,0,0,4.42870692906919,1.08536794762867,1.52581736317083,0.552896299656123,0,2.63262476584767,0,0,10.9269367075392,0,0.23056390438806,0,0.54323685961004,2.87101043758728,1.64875668123352,0.533034776018635,0,0,0,0,0,0,0,0,0,0.816164040795739,9.89471500037586,0,25.8768102080411,10.0841623533807,21.3860550726769,0.889563386041866,1.23563938946503,2.71497068714184,1.14581926067151,32.1031058919516,2.10838001152805,0,0.19566461893209,0,1.97292201424695,2.41981432097328,1.53036380815245,0.947798694427319,1.50323419414493,0.518440956986236,0,0,0,0,0,0,14.0583388051456,0,0.69647365264322,4.54289337429278,0,0.19351266257817,0.219267951258557,0.164230914106418,5.33439590686307,0,15.8186518546373,0,0,3.67202616544096,55.9276954621537,0.801588202515337,8.1112138000954,0.999048047910651,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.958337652243951,0,0,0,34.3517353564873,41.2488763221031,35.8936512288407,37.1402940928123,60.0916467391199,60.2562935093056,47.7674489380624,0,0,0,0,0,0,0,4.77137813885582,0.953423842781029,0,0,0,0,0,2.73373004961111,0,58.9466690598002,147.187574306805,0,0,0,25.7290317494412,50.3189897477728,0,0,0,0,0,0,0,0,0.146552233678082,0,2.32709321450791,1.05786081394152,0,0,92.3711118710559,97.4666691617929,147.883342758949,2.48083010905975,0.395223263795889,0,0,5.44017803369474,12.0331149130896,4.90152922821539,1.63936315354902,3.14108192500469,1.77213635993397,2.07444650333337,1.502291168478,1.14681839138014,1.10929051536852,3.72578417648301,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0,0,0.256241518587947,0.690860683462397,0,1.93561810612423,0,0,0,0,0,2.95836972702078,10.7993193761662,0,5.33866436948529,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26679645790968,1.41696576325585,2.23487402680012,1.0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| 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| ||
|short_description=p1@CLIC5 | |short_description=p1@CLIC5 | ||
}} | }} |
Latest revision as of 02:05, 19 September 2015
Short description: | p1@CLIC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLIC5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000339561, NM_016929, uc003oxu.3, uc003oxx.2_5end |
EntrezGene: | CLIC5 |
HGNC: | 13517 |
UniProt: | Q53G01Q9NZA1Q8NBY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.09e-07 | 18 |
alpha-beta T cell | 9.09e-07 | 18 |
immature T cell | 9.09e-07 | 18 |
mature T cell | 9.09e-07 | 18 |
immature alpha-beta T cell | 9.09e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.68e-54 | 114 |
neural tube | 9.23e-14 | 56 |
neural rod | 9.23e-14 | 56 |
future spinal cord | 9.23e-14 | 56 |
neural keel | 9.23e-14 | 56 |
regional part of nervous system | 4.23e-13 | 53 |
regional part of brain | 4.23e-13 | 53 |
cerebral hemisphere | 1.34e-12 | 32 |
telencephalon | 1.87e-12 | 34 |
brain grey matter | 2.02e-12 | 34 |
gray matter | 2.02e-12 | 34 |
regional part of forebrain | 6.82e-12 | 41 |
forebrain | 6.82e-12 | 41 |
anterior neural tube | 6.82e-12 | 41 |
future forebrain | 6.82e-12 | 41 |
regional part of cerebral cortex | 2.15e-11 | 22 |
regional part of telencephalon | 2.16e-11 | 32 |
neocortex | 2.44e-11 | 20 |
cerebral cortex | 1.89e-09 | 25 |
pallium | 1.89e-09 | 25 |
neural plate | 2.05e-09 | 82 |
presumptive neural plate | 2.05e-09 | 82 |
brain | 2.67e-09 | 68 |
future brain | 2.67e-09 | 68 |
neurectoderm | 1.72e-08 | 86 |
central nervous system | 3.74e-08 | 81 |
intestine | 1.97e-07 | 17 |
organ system subdivision | 3.65e-07 | 223 |
gastrointestinal system | 4.11e-07 | 25 |
compound organ | 8.71e-07 | 68 |