FFCP PHASE1:Hg19::chr15:75913265..75913337,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:75913265..75913337,-
|short_description=p4@SNUPN
|description=CAGE_peak_4_at_SNUPN_5end
|association_with_transcript=54bp_to_CR456811,CU678612,DQ893088,DQ...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10073 | |EntrezGene=10073 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14245 | |HGNC=14245 | ||
|TSSclassifier=strong | |||
|UniProt=O95149 | |UniProt=O95149 | ||
|association_with_transcript=54bp_to_CR456811,CU678612,DQ893088,DQ896360_5end | |||
|cluster_id=chr15:75913265..75913337,- | |||
|coexpression_cluster_id=C2349 | |||
|description=CAGE_peak_4_at_SNUPN_5end | |||
|id=chr15:75913265..75913337,- | |||
|ontology_enrichment_celltype=CL:0000055!2.58e-18!180;CL:0000680!5.51e-12!57;CL:0000056!5.51e-12!57;CL:0000355!5.51e-12!57;CL:0000187!1.14e-11!54;CL:0000359!1.29e-11!32;CL:0000192!1.14e-10!42;CL:0000514!1.14e-10!42;CL:0000183!2.15e-10!59;CL:0000393!5.76e-10!60;CL:0000211!5.76e-10!60;CL:0000048!1.01e-09!430;CL:0000723!1.81e-09!436;CL:0000034!3.85e-09!444;CL:0000057!1.86e-07!75;CL:0002494!3.83e-07!16;CL:0000144!4.82e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.35e-13;32!CL:0000860;2.57e-12;33!CL:0002057;2.57e-12;33!CL:0002494;4.53e-10;16!CL:0000192;6.50e-09;43!CL:0000473;1.90e-08;39!CL:0000234;1.90e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.97e-18,427;CL:0000723,4.93e-18,433;CL:0000034,6.51e-17,441;CL:0000359,4.70e-14,32;CL:0000192,5.05e-12,43;CL:0000514,5.05e-12,43;CL:0000187,5.51e-11,55;CL:0000680,1.36e-10,58;CL:0000056,1.36e-10,58;CL:0000355,1.36e-10,58;CL:0002320,1.43e-10,361;CL:0002494,1.78e-10,16;CL:0000393,1.05e-09,61;CL:0000211,1.05e-09,61;CL:0000134,1.14e-09,354;CL:0000860,8.82e-09,42;CL:0002057,8.82e-09,42;CL:0000219,1.16e-08,386;CL:0000473,1.94e-07,48;CL:0000234,1.94e-07,48;CL:0000057,2.34e-07,76;CL:0000136,9.31e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;6.50e-09;43!CL:0002057;4.57e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.16e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.67e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.27e-13!167;UBERON:0001637!6.06e-13!42;UBERON:0003509!6.06e-13!42;UBERON:0004572!6.06e-13!42;UBERON:0004573!2.68e-11!33;UBERON:0004571!2.68e-11!33;UBERON:0001134!3.35e-11!61;UBERON:0002036!3.35e-11!61;UBERON:0003082!3.35e-11!61;UBERON:0002385!6.40e-11!63;UBERON:0001015!6.40e-11!63;UBERON:0000383!6.40e-11!63;UBERON:0000914!2.51e-10!83;UBERON:0002329!2.51e-10!83;UBERON:0003077!2.51e-10!83;UBERON:0003059!2.51e-10!83;UBERON:0007282!2.51e-10!83;UBERON:0009618!2.51e-10!83;UBERON:0007285!2.51e-10!83;UBERON:0004290!2.98e-10!70;UBERON:0004872!2.15e-09!84;UBERON:0000486!2.88e-09!82;UBERON:0001981!2.02e-07!60;UBERON:0007500!2.02e-07!60;UBERON:0004537!2.02e-07!60;UBERON:0006965!2.02e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.04e-11;33!UBERON:0004571;1.04e-11;33!UBERON:0001637;6.47e-10;42!UBERON:0003509;6.47e-10;42!UBERON:0004572;6.47e-10;42!UBERON:0004457;9.46e-07;9!UBERON:0000042;9.46e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.76e-15,167;UBERON:0001637,1.58e-14,42;UBERON:0003509,1.58e-14,42;UBERON:0004572,1.58e-14,42;UBERON:0004573,4.84e-14,33;UBERON:0004571,4.84e-14,33;UBERON:0000926,7.66e-13,315;UBERON:0004120,7.66e-13,315;UBERON:0006603,7.66e-13,315;UBERON:0004872,6.60e-12,83;UBERON:0003081,1.76e-11,203;UBERON:0002384,3.01e-10,371;UBERON:0001134,4.10e-10,62;UBERON:0002036,4.10e-10,62;UBERON:0003082,4.10e-10,62;UBERON:0002329,1.42e-09,71;UBERON:0003059,1.42e-09,71;UBERON:0007282,1.42e-09,71;UBERON:0004290,1.42e-09,71;UBERON:0009618,1.42e-09,71;UBERON:0002385,1.75e-09,64;UBERON:0001015,1.75e-09,64;UBERON:0000383,1.75e-09,64;UBERON:0003077,2.70e-09,72;UBERON:0007285,2.70e-09,72;UBERON:0007524,5.03e-09,73;UBERON:0007500,5.17e-09,59;UBERON:0001981,5.17e-09,59;UBERON:0004537,5.17e-09,59;UBERON:0006965,5.17e-09,59;UBERON:0000486,1.10e-08,83;UBERON:0000948,6.10e-08,24;UBERON:0005498,6.10e-08,24;UBERON:0004140,6.10e-08,24;UBERON:0009881,6.10e-08,24;UBERON:0004141,6.10e-08,24;UBERON:0003084,6.10e-08,24;UBERON:0007005,6.10e-08,24;UBERON:0004139,6.10e-08,24;UBERON:0004291,6.10e-08,24;UBERON:0000055,7.95e-08,68;UBERON:0007503,8.54e-08,78;UBERON:0004535,6.33e-07,109 | |||
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| ||
|short_description=p4@SNUPN | |||
}} | }} |
Latest revision as of 04:00, 19 September 2015
Short description: | p4@SNUPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNUPN_5end |
Coexpression cluster: | C2349_Mast_CD14_Smooth_Mesenchymal_Hair_mesothelioma_papillotubular |
Association with transcript: | 54bp_to_CR456811, CU678612, DQ893088, DQ896360_5end |
EntrezGene: | SNUPN |
HGNC: | 14245 |
UniProt: | O95149 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.97e-18 | 427 |
somatic stem cell | 4.93e-18 | 433 |
stem cell | 6.51e-17 | 441 |
vascular associated smooth muscle cell | 4.70e-14 | 32 |
smooth muscle cell | 5.05e-12 | 43 |
smooth muscle myoblast | 5.05e-12 | 43 |
muscle cell | 5.51e-11 | 55 |
muscle precursor cell | 1.36e-10 | 58 |
myoblast | 1.36e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.36e-10 | 58 |
connective tissue cell | 1.43e-10 | 361 |
cardiocyte | 1.78e-10 | 16 |
electrically responsive cell | 1.05e-09 | 61 |
electrically active cell | 1.05e-09 | 61 |
mesenchymal cell | 1.14e-09 | 354 |
classical monocyte | 8.82e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.82e-09 | 42 |
motile cell | 1.16e-08 | 386 |
defensive cell | 1.94e-07 | 48 |
phagocyte | 1.94e-07 | 48 |
fibroblast | 2.34e-07 | 76 |
fat cell | 9.31e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.67e-09 | 14 |