FFCP PHASE1:Hg19::chr10:73587798..73587813,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5660 | |EntrezGene=5660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9498 | |HGNC=9498 | ||
|TSSclassifier=strong | |||
|UniProt=P07602 | |UniProt=P07602 | ||
|association_with_transcript=94bp_to_M12710_5end | |association_with_transcript=94bp_to_M12710_5end | ||
|cluster_id=chr10:73587798..73587813,- | |||
|coexpression_cluster_id=C143 | |||
|description=CAGE_peak_6_at_PSAP_5end | |description=CAGE_peak_6_at_PSAP_5end | ||
|id=chr10:73587798..73587813,- | |id=chr10:73587798..73587813,- | ||
|ontology_enrichment_celltype=CL:0002057!7.43e-26!42;CL:0002194!1.47e-25!63;CL:0000576!1.47e-25!63;CL:0000040!1.47e-25!63;CL:0000559!1.47e-25!63;CL:0000860!5.46e-24!45;CL:0000766!8.80e-24!76;CL:0002009!1.48e-23!65;CL:0000839!2.99e-22!70;CL:0000557!3.59e-21!71;CL:0000763!2.94e-08!112;CL:0000049!2.94e-08!112 | |ontology_enrichment_celltype=CL:0002057!7.43e-26!42;CL:0002194!1.47e-25!63;CL:0000576!1.47e-25!63;CL:0000040!1.47e-25!63;CL:0000559!1.47e-25!63;CL:0000860!5.46e-24!45;CL:0000766!8.80e-24!76;CL:0002009!1.48e-23!65;CL:0000839!2.99e-22!70;CL:0000557!3.59e-21!71;CL:0000763!2.94e-08!112;CL:0000049!2.94e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.73e-22;39!CL:0000234;4.73e-22;39!CL:0000860;5.76e-22;33!CL:0002057;5.76e-22;33!CL:0000576;1.01e-17;48!CL:0000766;3.59e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.77e-33,48;CL:0000234,5.77e-33,48;CL:0002194,1.20e-30,59;CL:0000576,1.20e-30,59;CL:0000040,1.20e-30,59;CL:0000559,1.20e-30,59;CL:0000860,1.36e-28,42;CL:0002057,1.36e-28,42;CL:0002009,1.52e-28,61;CL:0000766,1.21e-27,72;CL:0000839,3.06e-26,66;CL:0000557,2.35e-25,67;CL:0000763,1.76e-10,108;CL:0000049,1.76e-10,108;CL:0002320,3.86e-08,361;CL:0000134,6.05e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;6.96e-21;42 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.91e-18!80;UBERON:0001474!4.50e-16!86;UBERON:0002193!5.75e-16!112;UBERON:0002390!6.97e-16!102;UBERON:0003061!6.97e-16!102;UBERON:0003081!2.02e-15!216;UBERON:0004765!2.19e-14!101;UBERON:0001434!2.19e-14!101;UBERON:0002405!4.52e-13!115;UBERON:0000468!6.55e-11!659;UBERON:0000926!1.49e-10!448;UBERON:0004120!1.49e-10!448;UBERON:0006603!1.49e-10!448;UBERON:0002204!1.86e-10!167;UBERON:0000467!3.02e-09!625;UBERON:0000480!3.40e-09!626;UBERON:0000922!8.18e-08!612;UBERON:0000062!9.25e-08!511;UBERON:0000923!1.45e-07!604;UBERON:0005291!1.45e-07!604;UBERON:0006598!1.45e-07!604;UBERON:0002532!1.45e-07!604;UBERON:0002050!1.61e-07!605;UBERON:0005423!1.61e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.21e-22,76;UBERON:0004765,8.84e-20,90;UBERON:0001474,1.22e-19,82;UBERON:0000926,3.17e-19,315;UBERON:0004120,3.17e-19,315;UBERON:0006603,3.17e-19,315;UBERON:0001434,1.63e-18,100;UBERON:0003081,1.93e-18,203;UBERON:0002390,2.58e-18,98;UBERON:0003061,2.58e-18,98;UBERON:0002193,3.16e-18,108;UBERON:0002405,1.97e-17,93;UBERON:0002204,5.98e-13,167;UBERON:0002384,2.28e-07,371;UBERON:0000923,3.24e-07,560;UBERON:0010316,3.24e-07,560;UBERON:0005291,3.24e-07,560;UBERON:0006598,3.24e-07,560;UBERON:0010317,3.24e-07,560;UBERON:0002532,3.24e-07,560;UBERON:0002050,7.24e-07,564 | |||
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| ||
|short_description=p6@PSAP | |short_description=p6@PSAP | ||
}} | }} |
Latest revision as of 04:04, 19 September 2015
Short description: | p6@PSAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PSAP_5end |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | 94bp_to_M12710_5end |
EntrezGene: | PSAP |
HGNC: | 9498 |
UniProt: | P07602 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.77e-33 | 48 |
phagocyte | 5.77e-33 | 48 |
monopoietic cell | 1.20e-30 | 59 |
monocyte | 1.20e-30 | 59 |
monoblast | 1.20e-30 | 59 |
promonocyte | 1.20e-30 | 59 |
classical monocyte | 1.36e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.36e-28 | 42 |
macrophage dendritic cell progenitor | 1.52e-28 | 61 |
myeloid leukocyte | 1.21e-27 | 72 |
myeloid lineage restricted progenitor cell | 3.06e-26 | 66 |
granulocyte monocyte progenitor cell | 2.35e-25 | 67 |
myeloid cell | 1.76e-10 | 108 |
common myeloid progenitor | 1.76e-10 | 108 |
connective tissue cell | 3.86e-08 | 361 |
mesenchymal cell | 6.05e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.21e-22 | 76 |
skeletal element | 8.84e-20 | 90 |
bone element | 1.22e-19 | 82 |
mesoderm | 3.17e-19 | 315 |
mesoderm-derived structure | 3.17e-19 | 315 |
presumptive mesoderm | 3.17e-19 | 315 |
skeletal system | 1.63e-18 | 100 |
lateral plate mesoderm | 1.93e-18 | 203 |
hematopoietic system | 2.58e-18 | 98 |
blood island | 2.58e-18 | 98 |
hemolymphoid system | 3.16e-18 | 108 |
immune system | 1.97e-17 | 93 |
musculoskeletal system | 5.98e-13 | 167 |
connective tissue | 2.28e-07 | 371 |
germ layer | 3.24e-07 | 560 |
germ layer / neural crest | 3.24e-07 | 560 |
embryonic tissue | 3.24e-07 | 560 |
presumptive structure | 3.24e-07 | 560 |
germ layer / neural crest derived structure | 3.24e-07 | 560 |
epiblast (generic) | 3.24e-07 | 560 |
embryonic structure | 7.24e-07 | 564 |