FFCP PHASE1:Hg19::chr17:26989299..26989331,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6830 | |EntrezGene=6830 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11470 | |HGNC=11470 | ||
|TSSclassifier=strong | |||
|UniProt=Q7KZ85 | |UniProt=Q7KZ85 | ||
|association_with_transcript=0bp_to_ENST00000314616,ENST00000347486,NM_003170,uc002hby.2,uc010crt.2_5end | |association_with_transcript=0bp_to_ENST00000314616,ENST00000347486,NM_003170,uc002hby.2,uc010crt.2_5end | ||
|cluster_id=chr17:26989299..26989331,+ | |||
|description=CAGE_peak_3_at_SUPT6H_5end | |description=CAGE_peak_3_at_SUPT6H_5end | ||
|id=chr17:26989299..26989331,+ | |id=chr17:26989299..26989331,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.58e-12!94;UBERON:0001016!2.58e-12!94;UBERON:0001017!3.11e-12!82;UBERON:0005743!7.07e-12!86;UBERON:0001049!1.20e-11!57;UBERON:0005068!1.20e-11!57;UBERON:0006241!1.20e-11!57;UBERON:0007135!1.20e-11!57;UBERON:0000955!2.06e-11!69;UBERON:0006238!2.06e-11!69;UBERON:0002780!2.73e-10!41;UBERON:0001890!2.73e-10!41;UBERON:0006240!2.73e-10!41;UBERON:0002616!1.09e-09!59;UBERON:0003080!1.23e-09!42;UBERON:0002020!1.04e-08!34;UBERON:0003528!1.04e-08!34;UBERON:0001893!3.33e-08!34;UBERON:0001869!4.31e-08!32;UBERON:0002791!5.54e-08!33;UBERON:0002346!1.11e-07!90;UBERON:0003075!3.09e-07!86;UBERON:0007284!3.09e-07!86;UBERON:0002619!6.81e-07!22 | |ontology_enrichment_uberon=UBERON:0000073!2.58e-12!94;UBERON:0001016!2.58e-12!94;UBERON:0001017!3.11e-12!82;UBERON:0005743!7.07e-12!86;UBERON:0001049!1.20e-11!57;UBERON:0005068!1.20e-11!57;UBERON:0006241!1.20e-11!57;UBERON:0007135!1.20e-11!57;UBERON:0000955!2.06e-11!69;UBERON:0006238!2.06e-11!69;UBERON:0002780!2.73e-10!41;UBERON:0001890!2.73e-10!41;UBERON:0006240!2.73e-10!41;UBERON:0002616!1.09e-09!59;UBERON:0003080!1.23e-09!42;UBERON:0002020!1.04e-08!34;UBERON:0003528!1.04e-08!34;UBERON:0001893!3.33e-08!34;UBERON:0001869!4.31e-08!32;UBERON:0002791!5.54e-08!33;UBERON:0002346!1.11e-07!90;UBERON:0003075!3.09e-07!86;UBERON:0007284!3.09e-07!86;UBERON:0002619!6.81e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.11e-07;34!UBERON:0002020;1.11e-07;34!UBERON:0002780;1.21e-07;41!UBERON:0001890;1.21e-07;41!UBERON:0001893;1.26e-07;34!UBERON:0002791;1.53e-07;32!UBERON:0001869;1.57e-07;32!UBERON:0002619;4.22e-07;22!UBERON:0001017;5.06e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0003528;1.11e-07;34!UBERON:0002020;1.11e-07;34!UBERON:0002780;1.21e-07;41!UBERON:0001890;1.21e-07;41!UBERON:0001893;1.26e-07;34!UBERON:0002791;1.53e-07;32!UBERON:0001869;1.57e-07;32!UBERON:0002619;4.22e-07;22!UBERON:0001017;5.06e-07;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.57e-13,89;UBERON:0001017,8.76e-13,81;UBERON:0001049,2.58e-12,56;UBERON:0005068,2.58e-12,56;UBERON:0006241,2.58e-12,56;UBERON:0007135,2.58e-12,56;UBERON:0000955,5.41e-12,68;UBERON:0006238,5.41e-12,68;UBERON:0000073,2.88e-11,53;UBERON:0002616,2.88e-11,53;UBERON:0002780,2.43e-10,41;UBERON:0001890,2.43e-10,41;UBERON:0003080,2.43e-10,41;UBERON:0006240,2.43e-10,41;UBERON:0003528,9.25e-09,34;UBERON:0002020,9.25e-09,34;UBERON:0002346,1.58e-08,86;UBERON:0001893,2.98e-08,34;UBERON:0001869,3.85e-08,32;UBERON:0002791,4.25e-08,32;UBERON:0003075,4.52e-08,82;UBERON:0007284,4.52e-08,82;UBERON:0003056,3.67e-07,61;UBERON:0011216,3.89e-07,223;UBERON:0002619,6.04e-07,22 | |||
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| ||
|short_description=p3@SUPT6H | |short_description=p3@SUPT6H | ||
}} | }} |
Latest revision as of 06:52, 19 September 2015
Short description: | p3@SUPT6H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SUPT6H_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000314616, ENST00000347486, NM_003170, uc002hby.2, uc010crt.2_5end |
EntrezGene: | SUPT6H |
HGNC: | 11470 |
UniProt: | Q7KZ85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 3.57e-13 | 89 |
central nervous system | 8.76e-13 | 81 |
neural tube | 2.58e-12 | 56 |
neural rod | 2.58e-12 | 56 |
future spinal cord | 2.58e-12 | 56 |
neural keel | 2.58e-12 | 56 |
brain | 5.41e-12 | 68 |
future brain | 5.41e-12 | 68 |
regional part of nervous system | 2.88e-11 | 53 |
regional part of brain | 2.88e-11 | 53 |
regional part of forebrain | 2.43e-10 | 41 |
forebrain | 2.43e-10 | 41 |
anterior neural tube | 2.43e-10 | 41 |
future forebrain | 2.43e-10 | 41 |
brain grey matter | 9.25e-09 | 34 |
gray matter | 9.25e-09 | 34 |
neurectoderm | 1.58e-08 | 86 |
telencephalon | 2.98e-08 | 34 |
cerebral hemisphere | 3.85e-08 | 32 |
regional part of telencephalon | 4.25e-08 | 32 |
neural plate | 4.52e-08 | 82 |
presumptive neural plate | 4.52e-08 | 82 |
pre-chordal neural plate | 3.67e-07 | 61 |
organ system subdivision | 3.89e-07 | 223 |
regional part of cerebral cortex | 6.04e-07 | 22 |