FFCP PHASE1:Hg19::chr17:27038859..27038910,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147011 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28600 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NCQ7 | |||
|association_with_transcript=0bp_to_ENST00000301039,NM_152465,uc002hca.1_5end | |||
|cluster_id=chr17:27038859..27038910,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_PROCA1_5end | |||
|id=chr17:27038859..27038910,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;1.10e-13;1!CL:0000557;1.10e-13;1!CL:0000047;1.75e-07;2!CL:0000764;1.75e-07;2!CL:0000558;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.40e-07,2;CL:0000765,2.40e-07,2;CL:0000050,2.40e-07,2;CL:0000038,2.40e-07,2;CL:0000558,2.40e-07,2;CL:0000547,2.40e-07,2;CL:0000549,2.40e-07,2;CL:0000550,2.40e-07,2;CL:0000552,2.40e-07,2;CL:0000047,3.67e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.11e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.61e-32!57;UBERON:0005068!1.61e-32!57;UBERON:0006241!1.61e-32!57;UBERON:0007135!1.61e-32!57;UBERON:0001017!2.75e-29!82;UBERON:0002616!4.94e-29!59;UBERON:0000073!9.36e-29!94;UBERON:0001016!9.36e-29!94;UBERON:0005743!2.78e-28!86;UBERON:0002780!4.95e-27!41;UBERON:0001890!4.95e-27!41;UBERON:0006240!4.95e-27!41;UBERON:0000955!6.30e-27!69;UBERON:0006238!6.30e-27!69;UBERON:0002020!1.18e-26!34;UBERON:0003528!1.18e-26!34;UBERON:0001893!2.86e-26!34;UBERON:0003080!4.05e-26!42;UBERON:0007023!1.45e-25!115;UBERON:0002791!3.91e-25!33;UBERON:0001869!1.05e-24!32;UBERON:0003075!9.02e-23!86;UBERON:0007284!9.02e-23!86;UBERON:0002346!4.82e-21!90;UBERON:0000956!6.34e-19!25;UBERON:0000203!6.34e-19!25;UBERON:0002619!9.72e-19!22;UBERON:0003056!9.02e-17!61;UBERON:0001950!2.23e-16!20;UBERON:0004121!4.35e-14!169;UBERON:0000924!2.45e-13!173;UBERON:0006601!2.45e-13!173;UBERON:0000033!5.26e-13!123;UBERON:0000153!2.74e-12!129;UBERON:0007811!2.74e-12!129;UBERON:0002308!3.18e-09!9;UBERON:0000125!3.18e-09!9;UBERON:0000200!7.00e-09!6;UBERON:0004733!4.05e-08!12;UBERON:0002028!4.05e-08!12;UBERON:0007277!4.05e-08!12;UBERON:0003076!1.27e-07!15;UBERON:0003057!1.27e-07!15;UBERON:0004732!2.60e-07!13;UBERON:0009663!4.63e-07!7;UBERON:0002680!5.03e-07!9;UBERON:0001895!5.03e-07!9;UBERON:0010092!5.03e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002581;1.10e-13;1!UBERON:0002902;1.10e-13;1!UBERON:0009899;1.10e-13;1!UBERON:0002680;6.12e-13;9!UBERON:0001895;6.12e-13;9!UBERON:0004733;7.54e-10;12!UBERON:0002028;7.54e-10;12!UBERON:0001950;1.01e-09;20!UBERON:0000200;3.56e-09;6!UBERON:0002037;3.56e-09;6!UBERON:0004732;3.92e-09;13!UBERON:0002619;6.76e-09;22!UBERON:0000956;6.82e-08;25!UBERON:0000203;6.82e-08;25!UBERON:0002702;1.75e-07;2!UBERON:0000473;2.37e-07;8!UBERON:0000955;8.63e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-13,81;UBERON:0002581,1.25e-13,1;UBERON:0002902,1.42e-13,1;UBERON:0009899,1.42e-13,1;UBERON:0002680,6.93e-13,9;UBERON:0001895,6.93e-13,9;UBERON:0010092,6.93e-13,9;UBERON:0001016,2.96e-12,89;UBERON:0000073,1.31e-10,53;UBERON:0002616,1.31e-10,53;UBERON:0000955,1.68e-10,68;UBERON:0006238,1.68e-10,68;UBERON:0001049,5.07e-10,56;UBERON:0005068,5.07e-10,56;UBERON:0006241,5.07e-10,56;UBERON:0007135,5.07e-10,56;UBERON:0004733,8.26e-10,12;UBERON:0002028,8.26e-10,12;UBERON:0007277,8.26e-10,12;UBERON:0001950,1.08e-09,20;UBERON:0002037,3.56e-09,6;UBERON:0006215,3.56e-09,6;UBERON:0000200,3.71e-09,6;UBERON:0004732,4.26e-09,13;UBERON:0002619,7.21e-09,22;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15;UBERON:0000956,7.21e-08,25;UBERON:0000203,7.21e-08,25;UBERON:0002702,1.75e-07,2;UBERON:0000473,2.37e-07,8;UBERON:0004121,3.11e-07,171;UBERON:0000924,3.11e-07,171;UBERON:0006601,3.11e-07,171 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0.246242116153576,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0,0,0,0.142169232487422,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0,0,0,10.019899275575,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0.514414748524284,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0.128343036279748,0,1.30139853857622,0,1.34013012267479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,1.0457418040996,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0.213648142254946,0,0,0,0.144269212976445,0,0,0.59873811429845,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.649376687132959,3.99227596002388,0,0,0,0,0,0,0,0,0.173624994933292,0,0.723578631752448,1.52581736317083,1.10579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0.166211681900156,0.451191321234361,0.19606253431774,0.503464760927528,0.569261198172555,0.317873157960757,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.702793337176017,0,0,0,0,0,2.14250933141343,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,1.27746588066972,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0.160753148465019,0.137539436597234,0,0,0,0.546746009922222,0,0,0,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0.164185041498678,0,0,0,0,0.387848869084652,0.79339561045614,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,1.251909307065,0,0.332787154610557,0.807253238237985,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.617602894321944,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.323474434190045,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0.899209151350433,0,0.638535436228605,0.82046545696302,0.756215088665154,1.1756732918917,0.968853873791107,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.675375846183947,0.781078098613847,0.620060389503552,0.887821342714695,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0.115233987555779,0,1.15548546060614,1.24968269769413,0,0,0.078493092850514,0.942693539496011,0,0,0,0,0.142953088353313,0,0.464965701472501,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0.473314686579554,0.883889372481891,0.872701380680755,0,0,0,0,0,0,0.126698501011437,0,0,0.18378979906969,0,18.4142236670322,36.9790499615526,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p3@PROCA1 | |||
}} |
Latest revision as of 06:56, 19 September 2015
Short description: | p3@PROCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PROCA1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000301039, NM_152465, uc002hca.1_5end |
EntrezGene: | PROCA1 |
HGNC: | 28600 |
UniProt: | Q8NCQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.40e-07 | 2 |
erythroblast | 2.40e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 2.40e-07 | 2 |
erythroid progenitor cell | 2.40e-07 | 2 |
reticulocyte | 2.40e-07 | 2 |
proerythroblast | 2.40e-07 | 2 |
basophilic erythroblast | 2.40e-07 | 2 |
polychromatophilic erythroblast | 2.40e-07 | 2 |
orthochromatic erythroblast | 2.40e-07 | 2 |
neuronal stem cell | 3.67e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.03e-13 | 81 |
postcentral gyrus | 1.25e-13 | 1 |
occipital pole | 1.42e-13 | 1 |
pole of cerebral hemisphere | 1.42e-13 | 1 |
regional part of metencephalon | 6.93e-13 | 9 |
metencephalon | 6.93e-13 | 9 |
future metencephalon | 6.93e-13 | 9 |
nervous system | 2.96e-12 | 89 |
regional part of nervous system | 1.31e-10 | 53 |
regional part of brain | 1.31e-10 | 53 |
brain | 1.68e-10 | 68 |
future brain | 1.68e-10 | 68 |
neural tube | 5.07e-10 | 56 |
neural rod | 5.07e-10 | 56 |
future spinal cord | 5.07e-10 | 56 |
neural keel | 5.07e-10 | 56 |
segmental subdivision of hindbrain | 8.26e-10 | 12 |
hindbrain | 8.26e-10 | 12 |
presumptive hindbrain | 8.26e-10 | 12 |
neocortex | 1.08e-09 | 20 |
cerebellum | 3.56e-09 | 6 |
rhombic lip | 3.56e-09 | 6 |
gyrus | 3.71e-09 | 6 |
segmental subdivision of nervous system | 4.26e-09 | 13 |
regional part of cerebral cortex | 7.21e-09 | 22 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
cerebral cortex | 7.21e-08 | 25 |
pallium | 7.21e-08 | 25 |
middle frontal gyrus | 1.75e-07 | 2 |
testis | 2.37e-07 | 8 |
ectoderm-derived structure | 3.11e-07 | 171 |
ectoderm | 3.11e-07 | 171 |
presumptive ectoderm | 3.11e-07 | 171 |