FFCP PHASE1:Hg19::chr17:28088434..28088458,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:28088434..28088458,-
|short_description=p2@SSH2
|description=CAGE_peak_2_at_SSH2_5end
|association_with_transcript=-26bp_to_uc002heq.2_5end
|EntrezGene=8...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85464 | |EntrezGene=85464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30580 | |HGNC=30580 | ||
|TSSclassifier=strong | |||
|UniProt=Q76I76 | |UniProt=Q76I76 | ||
|association_with_transcript=-26bp_to_uc002heq.2_5end | |||
|cluster_id=chr17:28088434..28088458,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_SSH2_5end | |||
|id=chr17:28088434..28088458,- | |||
|ontology_enrichment_celltype=CL:0002087!7.88e-39!119;CL:0000738!6.37e-37!140;CL:0000037!2.24e-30!172;CL:0000566!2.24e-30!172;CL:0002031!3.09e-29!124;CL:0000988!3.23e-29!182;CL:0002032!6.69e-28!165;CL:0000837!6.69e-28!165;CL:0002057!5.43e-24!42;CL:0000860!1.85e-21!45;CL:0002194!7.81e-20!63;CL:0000576!7.81e-20!63;CL:0000040!7.81e-20!63;CL:0000559!7.81e-20!63;CL:0000766!8.97e-20!76;CL:0002009!8.57e-19!65;CL:0000542!1.35e-16!53;CL:0000051!1.35e-16!53;CL:0000838!1.75e-16!52;CL:0000557!4.63e-15!71;CL:0000839!7.39e-14!70;CL:0000763!2.31e-12!112;CL:0000049!2.31e-12!112;CL:0000791!2.27e-09!18;CL:0000789!2.27e-09!18;CL:0002420!2.27e-09!18;CL:0002419!2.27e-09!18;CL:0000790!2.27e-09!18;CL:0000945!3.10e-08!24;CL:0000826!3.10e-08!24;CL:0000084!3.93e-08!25;CL:0000827!3.93e-08!25;CL:0000236!3.77e-07!14;CL:0002393!6.95e-07!9;CL:0002397!6.95e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.27e-17;33!CL:0002057;3.27e-17;33!CL:0000576;5.26e-16;48!CL:0000473;3.31e-14;39!CL:0000234;3.31e-14;39!CL:0002087;2.70e-13;104!CL:0000766;3.08e-10;69!CL:0000542;5.29e-10;53!CL:0000791;1.74e-09;18!CL:0000789;1.74e-09;18!CL:0002419;1.74e-09;18!CL:0000738;6.86e-09;136!CL:0000945;2.68e-08;24!CL:0000084;3.80e-08;25!CL:0000236;4.74e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.15e-41,115;CL:0000738,1.44e-39,136;CL:0000037,7.33e-33,168;CL:0002031,9.95e-32,120;CL:0000988,2.63e-31,177;CL:0002032,2.69e-30,161;CL:0000837,2.69e-30,161;CL:0000860,3.01e-24,42;CL:0002057,3.01e-24,42;CL:0000473,1.59e-23,48;CL:0000234,1.59e-23,48;CL:0002194,1.97e-22,59;CL:0000576,1.97e-22,59;CL:0000040,1.97e-22,59;CL:0000559,1.97e-22,59;CL:0000766,3.12e-22,72;CL:0002009,3.19e-21,61;CL:0000557,3.83e-17,67;CL:0000542,9.10e-17,53;CL:0000051,9.10e-17,53;CL:0000838,1.18e-16,52;CL:0000839,6.45e-16,66;CL:0000763,4.75e-14,108;CL:0000049,4.75e-14,108;CL:0000791,1.85e-09,18;CL:0000789,1.85e-09,18;CL:0002420,1.85e-09,18;CL:0002419,1.85e-09,18;CL:0000790,1.85e-09,18;CL:0000945,2.60e-08,24;CL:0000826,2.60e-08,24;CL:0000084,3.30e-08,25;CL:0000827,3.30e-08,25;CL:0000236,3.26e-07,14;CL:0002393,6.04e-07,9;CL:0002397,6.04e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.04e-17;42!CL:0000051;5.29e-10;53!CL:0000790;1.74e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.57e-22!112;UBERON:0002390!2.33e-21!102;UBERON:0003061!2.33e-21!102;UBERON:0007023!1.79e-20!115;UBERON:0003081!8.90e-14!216;UBERON:0002405!1.94e-12!115;UBERON:0002371!2.53e-12!80;UBERON:0001474!4.45e-10!86;UBERON:0000178!2.49e-08!15;UBERON:0000179!2.49e-08!15;UBERON:0000463!2.49e-08!15;UBERON:0004765!2.05e-07!101;UBERON:0001434!2.05e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.63e-08;15!UBERON:0000179;1.63e-08;15!UBERON:0000463;1.63e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.49e-24,108;UBERON:0002390,1.15e-23,98;UBERON:0003061,1.15e-23,98;UBERON:0007023,1.95e-20,114;UBERON:0002405,1.06e-17,93;UBERON:0003081,1.12e-14,203;UBERON:0002371,4.14e-14,76;UBERON:0001474,1.76e-11,82;UBERON:0004765,2.97e-10,90;UBERON:0001434,1.70e-08,100;UBERON:0000178,2.08e-08,15;UBERON:0000179,2.08e-08,15;UBERON:0000463,2.08e-08,15;UBERON:0000926,3.49e-07,315;UBERON:0004120,3.49e-07,315;UBERON:0006603,3.49e-07,315 | |||
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| ||
|short_description=p2@SSH2 | |||
}} | }} |
Latest revision as of 09:23, 19 September 2015
Short description: | p2@SSH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SSH2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -26bp_to_uc002heq.2_5end |
EntrezGene: | SSH2 |
HGNC: | 30580 |
UniProt: | Q76I76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.49e-24 | 108 |
hematopoietic system | 1.15e-23 | 98 |
blood island | 1.15e-23 | 98 |
adult organism | 1.95e-20 | 114 |
immune system | 1.06e-17 | 93 |
lateral plate mesoderm | 1.12e-14 | 203 |
bone marrow | 4.14e-14 | 76 |
bone element | 1.76e-11 | 82 |
skeletal element | 2.97e-10 | 90 |
skeletal system | 1.70e-08 | 100 |
blood | 2.08e-08 | 15 |
haemolymphatic fluid | 2.08e-08 | 15 |
organism substance | 2.08e-08 | 15 |
mesoderm | 3.49e-07 | 315 |
mesoderm-derived structure | 3.49e-07 | 315 |
presumptive mesoderm | 3.49e-07 | 315 |