FFCP PHASE1:Hg19::chr19:50379867..50379920,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84335 | |EntrezGene=84335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28426 | |HGNC=28426 | ||
|TSSclassifier=strong | |||
|UniProt=Q96B36 | |UniProt=Q96B36 | ||
|association_with_transcript=-361bp_to_ENST00000391831_5end | |association_with_transcript=-361bp_to_ENST00000391831_5end | ||
|cluster_id=chr19:50379867..50379920,- | |||
|description=CAGE_peak_1_at_AKT1S1_5end | |description=CAGE_peak_1_at_AKT1S1_5end | ||
|id=chr19:50379867..50379920,- | |id=chr19:50379867..50379920,- | ||
|ontology_enrichment_celltype=CL:0000055!2.03e-23!180;CL:0000222!1.32e-22!119;CL:0000220!1.55e-22!246;CL:0002321!7.45e-22!248;CL:0000183!8.62e-16!59;CL:0000680!1.07e-14!57;CL:0000056!1.07e-14!57;CL:0000355!1.07e-14!57;CL:0000187!8.78e-14!54;CL:0000192!1.71e-13!42;CL:0000514!1.71e-13!42;CL:0000066!1.95e-13!254;CL:0000057!2.29e-11!75;CL:0000359!2.89e-11!32;CL:0000393!2.57e-10!60;CL:0000211!2.57e-10!60;CL:0000076!5.25e-09!62;CL:0000548!3.58e-08!679;CL:0000004!3.58e-08!679;CL:0000255!3.58e-08!679;CL:0000213!4.01e-08!57;CL:0000215!4.01e-08!57;CL:0000012!1.99e-07!682;CL:0002078!4.00e-07!44 | |ontology_enrichment_celltype=CL:0000055!2.03e-23!180;CL:0000222!1.32e-22!119;CL:0000220!1.55e-22!246;CL:0002321!7.45e-22!248;CL:0000183!8.62e-16!59;CL:0000680!1.07e-14!57;CL:0000056!1.07e-14!57;CL:0000355!1.07e-14!57;CL:0000187!8.78e-14!54;CL:0000192!1.71e-13!42;CL:0000514!1.71e-13!42;CL:0000066!1.95e-13!254;CL:0000057!2.29e-11!75;CL:0000359!2.89e-11!32;CL:0000393!2.57e-10!60;CL:0000211!2.57e-10!60;CL:0000076!5.25e-09!62;CL:0000548!3.58e-08!679;CL:0000004!3.58e-08!679;CL:0000255!3.58e-08!679;CL:0000213!4.01e-08!57;CL:0000215!4.01e-08!57;CL:0000012!1.99e-07!682;CL:0002078!4.00e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.22e-11;32!CL:0000192;9.01e-10;43!CL:0000187;1.13e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.84e-22,121;CL:0002321,7.26e-22,250;CL:0000680,1.71e-14,58;CL:0000056,1.71e-14,58;CL:0000355,1.71e-14,58;CL:0000187,1.39e-13,55;CL:0000066,1.84e-13,253;CL:0000192,3.06e-13,43;CL:0000514,3.06e-13,43;CL:0000057,2.04e-11,76;CL:0000359,2.89e-11,32;CL:0000393,3.44e-10,61;CL:0000211,3.44e-10,61;CL:0000076,2.15e-09,63;CL:0000213,3.97e-08,58;CL:0000215,3.97e-08,58;CL:0002078,4.02e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000514;9.01e-10;43!CL:0000355;6.43e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!8.07e-24!216;UBERON:0005256!1.97e-21!143;UBERON:0003104!9.66e-21!238;UBERON:0009142!9.66e-21!238;UBERON:0000119!1.43e-18!312;UBERON:0003914!2.95e-18!118;UBERON:0000475!3.42e-18!365;UBERON:0000490!5.43e-18!138;UBERON:0000483!7.91e-18!309;UBERON:0004290!1.57e-17!70;UBERON:0000486!1.93e-17!82;UBERON:0000914!4.64e-17!83;UBERON:0002329!4.64e-17!83;UBERON:0003077!4.64e-17!83;UBERON:0003059!4.64e-17!83;UBERON:0007282!4.64e-17!83;UBERON:0009618!4.64e-17!83;UBERON:0007285!4.64e-17!83;UBERON:0002049!1.16e-16!79;UBERON:0007798!1.16e-16!79;UBERON:0004872!1.91e-16!84;UBERON:0001009!4.98e-16!113;UBERON:0004535!5.90e-16!110;UBERON:0000481!6.15e-16!347;UBERON:0001981!1.03e-15!60;UBERON:0007500!1.03e-15!60;UBERON:0004537!1.03e-15!60;UBERON:0006965!1.03e-15!60;UBERON:0001134!5.26e-15!61;UBERON:0002036!5.26e-15!61;UBERON:0003082!5.26e-15!61;UBERON:0000055!1.64e-14!69;UBERON:0002385!2.45e-14!63;UBERON:0001015!2.45e-14!63;UBERON:0000383!2.45e-14!63;UBERON:0001637!3.90e-14!42;UBERON:0003509!3.90e-14!42;UBERON:0004572!3.90e-14!42;UBERON:0000468!1.05e-10!659;UBERON:0000926!1.73e-10!448;UBERON:0004120!1.73e-10!448;UBERON:0006603!1.73e-10!448;UBERON:0004573!3.73e-10!33;UBERON:0004571!3.73e-10!33;UBERON:0000477!5.02e-10!286;UBERON:0000467!2.39e-09!625;UBERON:0009569!2.89e-09!113;UBERON:0000480!4.57e-09!626;UBERON:0000923!5.58e-09!604;UBERON:0005291!5.58e-09!604;UBERON:0006598!5.58e-09!604;UBERON:0002532!5.58e-09!604;UBERON:0002050!7.28e-09!605;UBERON:0005423!7.28e-09!605;UBERON:0003102!1.72e-08!95;UBERON:0004111!2.17e-08!241;UBERON:0000922!9.89e-08!612;UBERON:0000025!4.13e-07!194;UBERON:0003103!4.32e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.51e-10;42!UBERON:0003509;2.51e-10;42!UBERON:0004572;2.51e-10;42!UBERON:0007500;1.50e-09;56!UBERON:0001981;1.50e-09;56!UBERON:0004537;1.50e-09;56!UBERON:0004573;2.27e-09;33!UBERON:0004571;2.27e-09;33!UBERON:0003914;7.20e-09;74!UBERON:0000055;2.23e-07;65!UBERON:0002049;5.77e-07;75!UBERON:0007798;5.77e-07;75 | |||
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| ||
|short_description=p1@AKT1S1 | |short_description=p1@AKT1S1 | ||
}} | }} |
Latest revision as of 09:32, 19 September 2015
Short description: | p1@AKT1S1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AKT1S1_5end |
Coexpression cluster: | NA |
Association with transcript: | -361bp_to_ENST00000391831_5end |
EntrezGene: | AKT1S1 |
HGNC: | 28426 |
UniProt: | Q96B36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.84e-22 | 121 |
embryonic cell | 7.26e-22 | 250 |
muscle precursor cell | 1.71e-14 | 58 |
myoblast | 1.71e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.71e-14 | 58 |
muscle cell | 1.39e-13 | 55 |
epithelial cell | 1.84e-13 | 253 |
smooth muscle cell | 3.06e-13 | 43 |
smooth muscle myoblast | 3.06e-13 | 43 |
fibroblast | 2.04e-11 | 76 |
vascular associated smooth muscle cell | 2.89e-11 | 32 |
electrically responsive cell | 3.44e-10 | 61 |
electrically active cell | 3.44e-10 | 61 |
squamous epithelial cell | 2.15e-09 | 63 |
lining cell | 3.97e-08 | 58 |
barrier cell | 3.97e-08 | 58 |
meso-epithelial cell | 4.02e-07 | 45 |