FFCP PHASE1:Hg19::chr10:8006992..8007014,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:8006992..8007014,+ to FFCP PHASE1:Hg19::chr10:8006992..8007014,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83860 | |EntrezGene=83860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=17303 | |HGNC=17303 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=219bp_to_BC024661_5end | |||
|cluster_id=chr10:8006992..8007014,+ | |||
|description=CAGE_peak_2_at_TAF3_5end | |||
|id=chr10:8006992..8007014,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000623;8.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,7.03e-07,3;CL:0000825,7.03e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.75e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.95e-12!57;UBERON:0005068!7.95e-12!57;UBERON:0006241!7.95e-12!57;UBERON:0007135!7.95e-12!57;UBERON:0001017!2.37e-10!82;UBERON:0000955!1.46e-09!69;UBERON:0006238!1.46e-09!69;UBERON:0005743!1.47e-09!86;UBERON:0003080!2.85e-09!42;UBERON:0002780!5.74e-09!41;UBERON:0001890!5.74e-09!41;UBERON:0006240!5.74e-09!41;UBERON:0000073!1.58e-08!94;UBERON:0001016!1.58e-08!94;UBERON:0007023!4.53e-08!115;UBERON:0002616!6.69e-08!59;UBERON:0002020!6.90e-08!34;UBERON:0003528!6.90e-08!34;UBERON:0001893!3.61e-07!34;UBERON:0002791!4.59e-07!33;UBERON:0002346!5.26e-07!90;UBERON:0003075!9.72e-07!86;UBERON:0007284!9.72e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.21e-08;34!UBERON:0002020;8.21e-08;34!UBERON:0002619;5.09e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.23e-11,81;UBERON:0000955,2.05e-11,68;UBERON:0006238,2.05e-11,68;UBERON:0001049,2.20e-11,56;UBERON:0005068,2.20e-11,56;UBERON:0006241,2.20e-11,56;UBERON:0007135,2.20e-11,56;UBERON:0001016,1.10e-10,89;UBERON:0000073,8.44e-10,53;UBERON:0002616,8.44e-10,53;UBERON:0003528,2.00e-09,34;UBERON:0002020,2.00e-09,34;UBERON:0002346,1.36e-08,86;UBERON:0003075,1.69e-08,82;UBERON:0007284,1.69e-08,82;UBERON:0002791,2.36e-07,32;UBERON:0002619,3.68e-07,22;UBERON:0002780,4.09e-07,41;UBERON:0001890,4.09e-07,41;UBERON:0003080,4.09e-07,41;UBERON:0006240,4.09e-07,41;UBERON:0011216,4.75e-07,223;UBERON:0001893,9.16e-07,34 | |||
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| ||
|short_description=p2@TAF3 | |||
}} | }} |
Latest revision as of 11:10, 19 September 2015
Short description: | p2@TAF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TAF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 219bp_to_BC024661_5end |
EntrezGene: | TAF3 |
HGNC: | 17303 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 7.03e-07 | 3 |
pro-NK cell | 7.03e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.23e-11 | 81 |
brain | 2.05e-11 | 68 |
future brain | 2.05e-11 | 68 |
neural tube | 2.20e-11 | 56 |
neural rod | 2.20e-11 | 56 |
future spinal cord | 2.20e-11 | 56 |
neural keel | 2.20e-11 | 56 |
nervous system | 1.10e-10 | 89 |
regional part of nervous system | 8.44e-10 | 53 |
regional part of brain | 8.44e-10 | 53 |
brain grey matter | 2.00e-09 | 34 |
gray matter | 2.00e-09 | 34 |
neurectoderm | 1.36e-08 | 86 |
neural plate | 1.69e-08 | 82 |
presumptive neural plate | 1.69e-08 | 82 |
regional part of telencephalon | 2.36e-07 | 32 |
regional part of cerebral cortex | 3.68e-07 | 22 |
regional part of forebrain | 4.09e-07 | 41 |
forebrain | 4.09e-07 | 41 |
anterior neural tube | 4.09e-07 | 41 |
future forebrain | 4.09e-07 | 41 |
organ system subdivision | 4.75e-07 | 223 |
telencephalon | 9.16e-07 | 34 |