FFCP PHASE1:Hg19::chr8:97173020..97173041,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=392255 | |EntrezGene=392255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4221 | |HGNC=4221 | ||
|TSSclassifier=strong | |||
|UniProt=Q6KF10,A0PK23 | |UniProt=Q6KF10,A0PK23 | ||
|association_with_transcript=0bp_to_ENST00000287020,ENST00000435084,NM_001001557,uc003yhp.2_5end | |association_with_transcript=0bp_to_ENST00000287020,ENST00000435084,NM_001001557,uc003yhp.2_5end | ||
|cluster_id=chr8:97173020..97173041,- | |||
|description=CAGE_peak_1_at_GDF6_5end | |description=CAGE_peak_1_at_GDF6_5end | ||
|id=chr8:97173020..97173041,- | |id=chr8:97173020..97173041,- | ||
|ontology_enrichment_celltype=CL:0000055!8.46e-24!180;CL:0000680!2.06e-12!57;CL:0000056!2.06e-12!57;CL:0000355!2.06e-12!57;CL:0000192!2.71e-11!42;CL:0000514!2.71e-11!42;CL:0000187!7.27e-11!54;CL:0000183!1.46e-10!59;CL:0000222!1.76e-09!119;CL:0000393!1.83e-09!60;CL:0000211!1.83e-09!60;CL:0000359!2.57e-09!32;CL:0002494!2.71e-09!16;CL:0000499!4.82e-09!27;CL:0000327!1.27e-07!14;CL:0000153!9.35e-07!9;CL:0000447!9.35e-07!9 | |ontology_enrichment_celltype=CL:0000055!8.46e-24!180;CL:0000680!2.06e-12!57;CL:0000056!2.06e-12!57;CL:0000355!2.06e-12!57;CL:0000192!2.71e-11!42;CL:0000514!2.71e-11!42;CL:0000187!7.27e-11!54;CL:0000183!1.46e-10!59;CL:0000222!1.76e-09!119;CL:0000393!1.83e-09!60;CL:0000211!1.83e-09!60;CL:0000359!2.57e-09!32;CL:0002494!2.71e-09!16;CL:0000499!4.82e-09!27;CL:0000327!1.27e-07!14;CL:0000153!9.35e-07!9;CL:0000447!9.35e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002494;5.39e-13;16!CL:0000359;1.82e-10;32!CL:0000192;3.11e-10;43!CL:0002548;1.13e-07;6!CL:0000327;1.16e-07;15!CL:0000499;1.52e-07;28!CL:0000153;2.56e-07;9!CL:0000447;2.56e-07;9!CL:1000413;3.25e-07;9!CL:0000187;9.63e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,8.96e-14,58;CL:0000056,8.96e-14,58;CL:0000355,8.96e-14,58;CL:0000192,1.18e-13,43;CL:0000514,1.18e-13,43;CL:0002494,6.91e-13,16;CL:0000187,1.27e-11,55;CL:0000359,3.26e-11,32;CL:0000222,3.68e-11,121;CL:0000393,1.26e-09,61;CL:0000211,1.26e-09,61;CL:0000327,1.14e-07,15;CL:0002548,1.26e-07,6;CL:0000499,1.59e-07,28;CL:1000413,2.33e-07,9;CL:0000153,2.64e-07,9;CL:0000447,2.64e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;3.11e-10;43!CL:0000355;6.64e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.29e-19!84;UBERON:0001009!4.39e-14!113;UBERON:0004535!1.36e-13!110;UBERON:0002049!1.86e-13!79;UBERON:0007798!1.86e-13!79;UBERON:0003914!1.91e-13!118;UBERON:0001981!2.92e-13!60;UBERON:0007500!2.92e-13!60;UBERON:0004537!2.92e-13!60;UBERON:0006965!2.92e-13!60;UBERON:0007100!3.87e-13!27;UBERON:0000948!6.00e-13!24;UBERON:0005498!6.00e-13!24;UBERON:0004140!6.00e-13!24;UBERON:0009881!6.00e-13!24;UBERON:0004141!6.00e-13!24;UBERON:0003084!6.00e-13!24;UBERON:0007005!6.00e-13!24;UBERON:0004139!6.00e-13!24;UBERON:0004291!6.00e-13!24;UBERON:0001134!6.47e-12!61;UBERON:0002036!6.47e-12!61;UBERON:0003082!6.47e-12!61;UBERON:0001637!8.47e-12!42;UBERON:0003509!8.47e-12!42;UBERON:0004572!8.47e-12!42;UBERON:0002385!1.79e-11!63;UBERON:0001015!1.79e-11!63;UBERON:0000383!1.79e-11!63;UBERON:0000055!4.89e-11!69;UBERON:0000490!9.98e-11!138;UBERON:0000025!5.98e-09!194;UBERON:0004290!8.98e-09!70;UBERON:0000119!2.78e-08!312;UBERON:0000914!2.79e-08!83;UBERON:0002329!2.79e-08!83;UBERON:0003077!2.79e-08!83;UBERON:0003059!2.79e-08!83;UBERON:0007282!2.79e-08!83;UBERON:0009618!2.79e-08!83;UBERON:0007285!2.79e-08!83;UBERON:0000483!5.09e-08!309;UBERON:0004573!1.91e-07!33;UBERON:0004571!1.91e-07!33;UBERON:0000468!3.36e-07!659;UBERON:0000486!3.88e-07!82;UBERON:0000477!7.79e-07!286 | |ontology_enrichment_uberon=UBERON:0004872!1.29e-19!84;UBERON:0001009!4.39e-14!113;UBERON:0004535!1.36e-13!110;UBERON:0002049!1.86e-13!79;UBERON:0007798!1.86e-13!79;UBERON:0003914!1.91e-13!118;UBERON:0001981!2.92e-13!60;UBERON:0007500!2.92e-13!60;UBERON:0004537!2.92e-13!60;UBERON:0006965!2.92e-13!60;UBERON:0007100!3.87e-13!27;UBERON:0000948!6.00e-13!24;UBERON:0005498!6.00e-13!24;UBERON:0004140!6.00e-13!24;UBERON:0009881!6.00e-13!24;UBERON:0004141!6.00e-13!24;UBERON:0003084!6.00e-13!24;UBERON:0007005!6.00e-13!24;UBERON:0004139!6.00e-13!24;UBERON:0004291!6.00e-13!24;UBERON:0001134!6.47e-12!61;UBERON:0002036!6.47e-12!61;UBERON:0003082!6.47e-12!61;UBERON:0001637!8.47e-12!42;UBERON:0003509!8.47e-12!42;UBERON:0004572!8.47e-12!42;UBERON:0002385!1.79e-11!63;UBERON:0001015!1.79e-11!63;UBERON:0000383!1.79e-11!63;UBERON:0000055!4.89e-11!69;UBERON:0000490!9.98e-11!138;UBERON:0000025!5.98e-09!194;UBERON:0004290!8.98e-09!70;UBERON:0000119!2.78e-08!312;UBERON:0000914!2.79e-08!83;UBERON:0002329!2.79e-08!83;UBERON:0003077!2.79e-08!83;UBERON:0003059!2.79e-08!83;UBERON:0007282!2.79e-08!83;UBERON:0009618!2.79e-08!83;UBERON:0007285!2.79e-08!83;UBERON:0000483!5.09e-08!309;UBERON:0004573!1.91e-07!33;UBERON:0004571!1.91e-07!33;UBERON:0000468!3.36e-07!659;UBERON:0000486!3.88e-07!82;UBERON:0000477!7.79e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.03e-15;22!UBERON:0007100;4.17e-13;25!UBERON:0001637;3.93e-12;42!UBERON:0003509;3.93e-12;42!UBERON:0004572;3.93e-12;42!UBERON:0007500;4.62e-08;56!UBERON:0001981;4.62e-08;56!UBERON:0004537;4.62e-08;56!UBERON:0004573;2.65e-07;33!UBERON:0004571;2.65e-07;33!UBERON:0003915;3.25e-07;9!UBERON:0004700;3.25e-07;9!UBERON:0001917;3.25e-07;9!UBERON:0004457;3.50e-07;9!UBERON:0000042;3.50e-07;9!UBERON:0002049;9.07e-07;75!UBERON:0007798;9.07e-07;75 | |||
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| ||
|short_description=p1@GDF6 | |short_description=p1@GDF6 | ||
}} | }} |
Latest revision as of 14:04, 19 September 2015
Short description: | p1@GDF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GDF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000287020, ENST00000435084, NM_001001557, uc003yhp.2_5end |
EntrezGene: | GDF6 |
HGNC: | 4221 |
UniProt: | Q6KF10A0PK23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 8.96e-14 | 58 |
myoblast | 8.96e-14 | 58 |
multi-potent skeletal muscle stem cell | 8.96e-14 | 58 |
smooth muscle cell | 1.18e-13 | 43 |
smooth muscle myoblast | 1.18e-13 | 43 |
cardiocyte | 6.91e-13 | 16 |
muscle cell | 1.27e-11 | 55 |
vascular associated smooth muscle cell | 3.26e-11 | 32 |
mesodermal cell | 3.68e-11 | 121 |
electrically responsive cell | 1.26e-09 | 61 |
electrically active cell | 1.26e-09 | 61 |
extracellular matrix secreting cell | 1.14e-07 | 15 |
cardiac fibroblast | 1.26e-07 | 6 |
stromal cell | 1.59e-07 | 28 |
endothelial cell of artery | 2.33e-07 | 9 |
GAG secreting cell | 2.64e-07 | 9 |
carbohydrate secreting cell | 2.64e-07 | 9 |