FFCP PHASE1:Hg19::chr3:112358790..112358807,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:112358790..112358807,- to FFCP PHASE1:Hg19::chr3:112358790..112358807,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_uc011bhv.1_5end | |||
|cluster_id=chr3:112358790..112358807,- | |||
|coexpression_cluster_id=C2713 | |||
|description=CAGE_peak_14_at_CCDC80_5end | |||
|id=chr3:112358790..112358807,- | |||
|ontology_enrichment_celltype=CL:0000055!1.22e-26!180;CL:0000057!4.14e-19!75;CL:0000680!1.14e-13!57;CL:0000056!1.14e-13!57;CL:0000355!1.14e-13!57;CL:0000187!1.89e-12!54;CL:0000136!1.53e-11!15;CL:0000183!8.47e-11!59;CL:0000393!7.38e-10!60;CL:0000211!7.38e-10!60;CL:0002334!1.27e-09!12;CL:0000192!4.19e-09!42;CL:0000514!4.19e-09!42;CL:0002620!2.17e-08!23;CL:0002494!5.31e-08!16;CL:0000359!4.99e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.41e-13;12!CL:0000136;9.04e-11;13!CL:0002620;8.73e-09;23!CL:0002570;2.86e-07;8!CL:1000306;5.81e-07;4!CL:0002547;5.81e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.73e-18,76;CL:0002334,2.38e-13,12;CL:0000136,6.26e-13,15;CL:0000680,3.77e-09,58;CL:0000056,3.77e-09,58;CL:0000355,3.77e-09,58;CL:0000187,4.21e-09,55;CL:0002620,8.82e-09,23;CL:0000393,1.75e-07,61;CL:0000211,1.75e-07,61;CL:0000192,1.85e-07,43;CL:0000514,1.85e-07,43;CL:0002570,2.00e-07,8;CL:0000048,2.16e-07,427;CL:1000306,5.78e-07,4;CL:0002547,5.78e-07,4;CL:0000723,6.10e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.62e-07;5!DOID:450;1.62e-07;5!DOID:66;1.62e-07;5!DOID:423;1.62e-07;5!DOID:0080000;1.62e-07;5!DOID:11722;1.62e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.87e-07,5;DOID:450,1.87e-07,5;DOID:66,1.87e-07,5;DOID:423,1.87e-07,5;DOID:0080000,1.87e-07,5;DOID:11722,1.87e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002385!3.17e-14!63;UBERON:0001015!3.17e-14!63;UBERON:0000383!3.17e-14!63;UBERON:0001134!2.08e-13!61;UBERON:0002036!2.08e-13!61;UBERON:0003082!2.08e-13!61;UBERON:0007100!6.08e-13!27;UBERON:0000948!2.34e-12!24;UBERON:0005498!2.34e-12!24;UBERON:0004140!2.34e-12!24;UBERON:0009881!2.34e-12!24;UBERON:0004141!2.34e-12!24;UBERON:0003084!2.34e-12!24;UBERON:0007005!2.34e-12!24;UBERON:0004139!2.34e-12!24;UBERON:0004291!2.34e-12!24;UBERON:0004290!1.76e-11!70;UBERON:0004872!2.12e-11!84;UBERON:0000914!4.56e-11!83;UBERON:0002329!4.56e-11!83;UBERON:0003077!4.56e-11!83;UBERON:0003059!4.56e-11!83;UBERON:0007282!4.56e-11!83;UBERON:0009618!4.56e-11!83;UBERON:0007285!4.56e-11!83;UBERON:0001013!8.47e-11!14;UBERON:0000486!1.43e-09!82;UBERON:0001009!6.60e-08!113;UBERON:0004535!2.34e-07!110;UBERON:0002199!2.72e-07!45;UBERON:0002416!2.72e-07!45;UBERON:0002100!4.03e-07!216;UBERON:0005256!5.83e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.22e-13;14!UBERON:0000948;1.00e-09;22!UBERON:0004457;2.53e-09;9!UBERON:0000042;2.53e-09;9!UBERON:0003688;1.44e-08;6!UBERON:0002358;1.44e-08;6!UBERON:0003684;1.44e-08;6!UBERON:0001178;1.44e-08;6!UBERON:0007100;4.80e-08;25!UBERON:0004797;5.81e-07;4!UBERON:0000415;5.81e-07;4!UBERON:0007240;5.81e-07;4!UBERON:0005742;5.81e-07;4!UBERON:0005734;5.81e-07;4!UBERON:0004664;5.81e-07;4!UBERON:0004663;5.81e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.17e-13,14;UBERON:0004797,2.39e-10,7;UBERON:0000948,4.91e-10,24;UBERON:0005498,4.91e-10,24;UBERON:0004140,4.91e-10,24;UBERON:0009881,4.91e-10,24;UBERON:0004141,4.91e-10,24;UBERON:0003084,4.91e-10,24;UBERON:0007005,4.91e-10,24;UBERON:0004139,4.91e-10,24;UBERON:0004291,4.91e-10,24;UBERON:0002385,2.35e-09,64;UBERON:0001015,2.35e-09,64;UBERON:0000383,2.35e-09,64;UBERON:0001134,5.96e-09,62;UBERON:0002036,5.96e-09,62;UBERON:0003082,5.96e-09,62;UBERON:0003688,1.60e-08,6;UBERON:0002358,1.60e-08,6;UBERON:0003684,1.60e-08,6;UBERON:0001178,1.60e-08,6;UBERON:0007100,2.10e-08,27;UBERON:0004872,2.11e-08,83;UBERON:0002199,3.55e-08,46;UBERON:0002416,3.55e-08,46;UBERON:0007524,3.94e-07,73;UBERON:0000415,5.78e-07,4;UBERON:0007240,5.78e-07,4;UBERON:0005742,5.78e-07,4;UBERON:0005734,5.78e-07,4;UBERON:0004664,5.78e-07,4;UBERON:0004663,5.78e-07,4;UBERON:0002329,7.77e-07,71;UBERON:0003059,7.77e-07,71;UBERON:0007282,7.77e-07,71;UBERON:0004290,7.77e-07,71;UBERON:0009618,7.77e-07,71 | |||
|phase1_expression=5.26867299884614,8.99222200342129,18.3240725324763,4.00293193412522,6.25745532198203,6.97870819280295,7.59899634504932,3.15859936713415,9.92505387159386,0,0,0.218441372130172,0.527533956456907,0.247532705920093,0.994192127183747,0,0,0,0,1.23121058076788,3.06001036866379,1.56727360739044,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3806866313962,3.35350429851818,3.58015173161885,0.722878304769133,2.00535164254356,2.60723734129483,0,0,0,0,0.263504357079378,1.83370705696798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,14.9091585508596,13.6760952597746,10.4603252842443,151.736572376122,18.7974242565129,6.16745360156538,0,0.24666754841716,7.15785381419462,0.404132016209064,0.326923806226917,2.27036141467397,2.88087962239999,0,0,0,0.448346041655403,0.117434498643765,0,0,0,0,0.413303124703062,0,0.494533858557114,0.910161361938026,1.43723628363248,0,0,0,2.19488810440419,1.5324389789951,1.35214253015937,0.113432183160021,4.48474089222155,3.20336083227851,15.8948925869671,16.5050102846421,11.2327256869898,4.89517026086695,3.90845398296339,10.6329089311998,6.62571635096151,11.6119536152293,14.9120835800525,7.59736467048416,7.81021103536552,1.20902517873168,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0.560655421726804,0.43596006883328,0.80672114403045,0.517086863031111,3.57656445851882,1.690605505112,0.531876233169741,0,0.257207374262142,0,0,2.00169191121407,0.542621605391443,0,0.325736184293735,1.06617584622764,0.791951872933429,0,0,0.699810938274399,0,0,0,0,2.29723871668228,0,5.21212704003285,0.821905290201534,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,1.50051156317903,1.62759014219841,1.45579603071565,1.42743191037729,0.157702415033935,3.27995961979597,5.41702979509894,0,2.0694614258501,1.32845119707087,0.368738337083406,0.347534457872331,0.195801157462741,0,0,0,0,0,1.66435439510497,0.604780586659361,12.1572825831201,4.910783145218,7.01650236082684,19.8615681346337,3.58195074346692,7.07757253031873,7.42090332224955,2.00472601943452,3.72879623157567,2.05317890034523,1.03850885836724,2.09178681227927,0,0,0,3.4444334449382,4.55227920016793,8.78533580228142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.366277859273374,0.165018999841176,0.574265537996172,0,1.6068392984416,0.096670718292122,0.154048617114644,1.84204409671355,0.275673144969061,0.644521469209642,2.0302337147992,0.0852266274161009,1.78064071293475,0,0,0,0,1.39453664789186,59.499533550991,3.485186350803,3.08033580176089,0.532306030317022,3.47973196830029,1.8532421910392,0.429374660225974,2.232950216158,0,1.5250415513906,0.255897791311334,3.42351190427136,1.27281299170375,0,0.539617372749944,1.09814811894422,1.17812402345686,2.83055474202642,1.58510321173008,0.421258456238981,2.43816869544795,2.19342140668156,0,2.32049849393576,7.07027159768564,14.6910551606316,1.65409603063837,1.32687795048244,0,0,1.31178950409327,0.608731130888112,0.92947049429925,1.69017361519345,0.430234056612155,0.392996164052485,0.7133421029625,0,5.9110137883346,6.25660296623814,0,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0.284136146806413,0,0,0,0,0,0,0,0.211125408127993,6.37593562403423,4.69682656402951,0,0,0,9.33118762985422,0,0,0,7.00368180022229,0,0,0,0,0,0,0.0874599999961957,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.15672740140249,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,0.884575645033392,1.22206028986725,0,0,0,0.067401132980677,6.42062117839031,0,0,0.19566461893209,0,4.73501283419269,0,0,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0.261177619741208,10.3088734262798,0,0,0,0,1.55182426381471,0,0.677942222341597,0,0,0,0,0,3.84215390530835,0,0,0,0,0.14405479798815,0.745515213392595,0,0,0.104602846312333,1.63197148218115,0,0,0.136905378891993,0,0,0,12.5677080572514,4.81236890424536,5.0251111720377,0.199679000498991,0.429226048136571,0.89268582976749,0.604651252380536,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,5.00286728461357,1.32418394073086,0,3.80099721227599,6.04955043840887,7.83809664262582,0,0,1.36310417428337,0,0,0,0,0,0,0,1.60181118851542,0.314408610199332,1.65695622138878,0,0,0,0,3.80812462358632,0.7520696820681,0.612691153526923,1.31149052283922,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,3.73137007217185,11.9193788022084,3.88364103051829,3.21985108967651,6.0376296420618,0,6.86520205190771,10.132471892137,1.08806040407946,0.7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| ||
|short_description=p14@CCDC80 | |||
}} | }} |
Latest revision as of 14:22, 19 September 2015
Short description: | p14@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CCDC80_5end |
Coexpression cluster: | C2713_Fibroblast_Smooth_Cardiac_Preadipocyte_uterus_Adipocyte_Ewing |
Association with transcript: | -27bp_to_uc011bhv.1_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.73e-18 | 76 |
preadipocyte | 2.38e-13 | 12 |
fat cell | 6.26e-13 | 15 |
muscle precursor cell | 3.77e-09 | 58 |
myoblast | 3.77e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.77e-09 | 58 |
muscle cell | 4.21e-09 | 55 |
skin fibroblast | 8.82e-09 | 23 |
electrically responsive cell | 1.75e-07 | 61 |
electrically active cell | 1.75e-07 | 61 |
smooth muscle cell | 1.85e-07 | 43 |
smooth muscle myoblast | 1.85e-07 | 43 |
mesenchymal stem cell of adipose | 2.00e-07 | 8 |
multi fate stem cell | 2.16e-07 | 427 |
fibroblast of tunica adventitia of artery | 5.78e-07 | 4 |
fibroblast of the aortic adventitia | 5.78e-07 | 4 |
somatic stem cell | 6.10e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.87e-07 | 5 |
myotonic disease | 1.87e-07 | 5 |
muscle tissue disease | 1.87e-07 | 5 |
myopathy | 1.87e-07 | 5 |
muscular disease | 1.87e-07 | 5 |
myotonic dystrophy | 1.87e-07 | 5 |