FFCP PHASE1:Hg19::chr18:44497547..44497582,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83473 | |EntrezGene=83473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25387 | |HGNC=25387 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010dnq.1_5end | |association_with_transcript=0bp_to_uc010dnq.1_5end | ||
|cluster_id=chr18:44497547..44497582,+ | |||
|description=CAGE_peak_1_at_KATNAL2_5end | |description=CAGE_peak_1_at_KATNAL2_5end | ||
|id=chr18:44497547..44497582,+ | |id=chr18:44497547..44497582,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.52e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.63e-16!94;UBERON:0001016!2.63e-16!94;UBERON:0001049!2.44e-15!57;UBERON:0005068!2.44e-15!57;UBERON:0006241!2.44e-15!57;UBERON:0007135!2.44e-15!57;UBERON:0000955!4.04e-15!69;UBERON:0006238!4.04e-15!69;UBERON:0001017!5.81e-15!82;UBERON:0007023!7.53e-15!115;UBERON:0005743!8.21e-15!86;UBERON:0002616!6.59e-14!59;UBERON:0002346!1.16e-12!90;UBERON:0003075!1.99e-12!86;UBERON:0007284!1.99e-12!86;UBERON:0003080!2.54e-11!42;UBERON:0002780!8.32e-11!41;UBERON:0001890!8.32e-11!41;UBERON:0006240!8.32e-11!41;UBERON:0000153!4.28e-10!129;UBERON:0007811!4.28e-10!129;UBERON:0000924!4.96e-10!173;UBERON:0006601!4.96e-10!173;UBERON:0004121!9.83e-10!169;UBERON:0001893!9.96e-10!34;UBERON:0000033!1.02e-09!123;UBERON:0002020!1.70e-09!34;UBERON:0003528!1.70e-09!34;UBERON:0002791!3.06e-09!33;UBERON:0001869!9.90e-09!32;UBERON:0002619!2.49e-07!22;UBERON:0003056!3.85e-07!61;UBERON:0001950!8.05e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.29e-09;41!UBERON:0001890;9.29e-09;41!UBERON:0001893;9.32e-09;34!UBERON:0000073;1.58e-08;53!UBERON:0002616;1.58e-08;53!UBERON:0003528;2.56e-08;34!UBERON:0002020;2.56e-08;34!UBERON:0001017;4.46e-08;75!UBERON:0002791;4.62e-08;32!UBERON:0001869;4.75e-08;32!UBERON:0002619;1.11e-07;22!UBERON:0000955;1.18e-07;68!UBERON:0001016;1.40e-07;83!UBERON:0001950;3.79e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.64e-18,89;UBERON:0000955,3.73e-16,68;UBERON:0006238,3.73e-16,68;UBERON:0001049,3.77e-16,56;UBERON:0005068,3.77e-16,56;UBERON:0006241,3.77e-16,56;UBERON:0007135,3.77e-16,56;UBERON:0001017,5.32e-16,81;UBERON:0007023,9.04e-16,114;UBERON:0000073,1.90e-14,53;UBERON:0002616,1.90e-14,53;UBERON:0002780,3.59e-12,41;UBERON:0001890,3.59e-12,41;UBERON:0003080,3.59e-12,41;UBERON:0006240,3.59e-12,41;UBERON:0002346,3.90e-12,86;UBERON:0003075,5.87e-12,82;UBERON:0007284,5.87e-12,82;UBERON:0001893,1.61e-10,34;UBERON:0003528,2.96e-10,34;UBERON:0002020,2.96e-10,34;UBERON:0004121,4.31e-10,171;UBERON:0000924,4.31e-10,171;UBERON:0006601,4.31e-10,171;UBERON:0001869,2.34e-09,32;UBERON:0002791,2.45e-09,32;UBERON:0010371,3.08e-08,104;UBERON:0002619,6.84e-08,22;UBERON:0003056,1.02e-07,61;UBERON:0001950,2.78e-07,20;UBERON:0010314,8.88e-07,132 | |||
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| ||
|short_description=p1@KATNAL2 | |short_description=p1@KATNAL2 | ||
}} | }} |
Latest revision as of 15:42, 19 September 2015
Short description: | p1@KATNAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KATNAL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010dnq.1_5end |
EntrezGene: | KATNAL2 |
HGNC: | 25387 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 4.64e-18 | 89 |
brain | 3.73e-16 | 68 |
future brain | 3.73e-16 | 68 |
neural tube | 3.77e-16 | 56 |
neural rod | 3.77e-16 | 56 |
future spinal cord | 3.77e-16 | 56 |
neural keel | 3.77e-16 | 56 |
central nervous system | 5.32e-16 | 81 |
adult organism | 9.04e-16 | 114 |
regional part of nervous system | 1.90e-14 | 53 |
regional part of brain | 1.90e-14 | 53 |
regional part of forebrain | 3.59e-12 | 41 |
forebrain | 3.59e-12 | 41 |
anterior neural tube | 3.59e-12 | 41 |
future forebrain | 3.59e-12 | 41 |
neurectoderm | 3.90e-12 | 86 |
neural plate | 5.87e-12 | 82 |
presumptive neural plate | 5.87e-12 | 82 |
telencephalon | 1.61e-10 | 34 |
brain grey matter | 2.96e-10 | 34 |
gray matter | 2.96e-10 | 34 |
ectoderm-derived structure | 4.31e-10 | 171 |
ectoderm | 4.31e-10 | 171 |
presumptive ectoderm | 4.31e-10 | 171 |
cerebral hemisphere | 2.34e-09 | 32 |
regional part of telencephalon | 2.45e-09 | 32 |
ecto-epithelium | 3.08e-08 | 104 |
regional part of cerebral cortex | 6.84e-08 | 22 |
pre-chordal neural plate | 1.02e-07 | 61 |
neocortex | 2.78e-07 | 20 |
structure with developmental contribution from neural crest | 8.88e-07 | 132 |