FFCP PHASE1:Hg19::chr2:204801515..204801526,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29851 | |EntrezGene=29851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5351 | |HGNC=5351 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_ENST00000435193_5end | |association_with_transcript=12bp_to_ENST00000435193_5end | ||
|cluster_id=chr2:204801515..204801526,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_ICOS_5end | |description=CAGE_peak_2_at_ICOS_5end | ||
|id=chr2:204801515..204801526,+ | |id=chr2:204801515..204801526,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.13e-34!18;CL:0000789!2.13e-34!18;CL:0002420!2.13e-34!18;CL:0002419!2.13e-34!18;CL:0000790!2.13e-34!18;CL:0000084!7.28e-29!25;CL:0000827!7.28e-29!25;CL:0000838!1.41e-22!52;CL:0000542!5.50e-22!53;CL:0000051!5.50e-22!53;CL:0000625!3.73e-21!11;CL:0000738!1.01e-19!140;CL:0002087!1.88e-18!119;CL:0000037!8.89e-18!172;CL:0000566!8.89e-18!172;CL:0000988!5.38e-16!182;CL:0002032!2.98e-15!165;CL:0000837!2.98e-15!165;CL:0002031!3.79e-14!124;CL:0000624!4.73e-13!6;CL:0000898!1.49e-07!3 | |ontology_enrichment_celltype=CL:0000791!2.13e-34!18;CL:0000789!2.13e-34!18;CL:0002420!2.13e-34!18;CL:0002419!2.13e-34!18;CL:0000790!2.13e-34!18;CL:0000084!7.28e-29!25;CL:0000827!7.28e-29!25;CL:0000838!1.41e-22!52;CL:0000542!5.50e-22!53;CL:0000051!5.50e-22!53;CL:0000625!3.73e-21!11;CL:0000738!1.01e-19!140;CL:0002087!1.88e-18!119;CL:0000037!8.89e-18!172;CL:0000566!8.89e-18!172;CL:0000988!5.38e-16!182;CL:0002032!2.98e-15!165;CL:0000837!2.98e-15!165;CL:0002031!3.79e-14!124;CL:0000624!4.73e-13!6;CL:0000898!1.49e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.54e-52;18!CL:0000789;1.54e-52;18!CL:0002419;1.54e-52;18!CL:0000084;1.13e-45;25!CL:0000625;9.07e-30;11!CL:0000624;2.37e-21;6!CL:0000542;3.42e-14;53!CL:0000898;6.96e-12;3!CL:0000623;2.18e-10;3!CL:0000815;1.71e-08;2!CL:0000792;1.71e-08;2!CL:0002677;1.71e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.33e-52,18;CL:0000789,1.33e-52,18;CL:0002420,1.33e-52,18;CL:0002419,1.33e-52,18;CL:0000790,1.33e-52,18;CL:0000084,1.06e-45,25;CL:0000827,1.06e-45,25;CL:0000625,8.54e-30,11;CL:0000838,4.73e-29,52;CL:0000542,2.17e-28,53;CL:0000051,2.17e-28,53;CL:0000624,2.13e-21,6;CL:0002087,1.99e-14,115;CL:0000738,1.99e-13,136;CL:0000898,6.60e-12,3;CL:0002031,2.92e-11,120;CL:0000623,1.87e-10,3;CL:0000825,1.87e-10,3;CL:0000037,1.41e-09,168;CL:0000988,9.35e-09,177;CL:0000815,1.65e-08,2;CL:0000792,1.65e-08,2;CL:0002677,1.65e-08,2;CL:0000893,3.49e-08,2;CL:0002489,3.49e-08,2;CL:0000809,3.49e-08,2;CL:0000808,3.49e-08,2;CL:0000894,3.49e-08,2;CL:0000806,3.49e-08,2;CL:0000807,3.49e-08,2;CL:0000805,3.49e-08,2;CL:0002425,3.49e-08,2;CL:0002032,1.09e-07,161;CL:0000837,1.09e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.54e-52;18!CL:0000051;3.42e-14;53!CL:0002425;3.49e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.68e-11!15;UBERON:0000179!3.68e-11!15;UBERON:0000463!3.68e-11!15;UBERON:0004177!7.83e-10!7;UBERON:0002370!7.70e-09!4;UBERON:0005058!7.70e-09!4;UBERON:0009113!7.70e-09!4;UBERON:0003295!7.70e-09!4;UBERON:0005562!7.70e-09!4;UBERON:0002193!2.74e-07!112;UBERON:0002390!3.23e-07!102;UBERON:0003061!3.23e-07!102 | |ontology_enrichment_uberon=UBERON:0000178!3.68e-11!15;UBERON:0000179!3.68e-11!15;UBERON:0000463!3.68e-11!15;UBERON:0004177!7.83e-10!7;UBERON:0002370!7.70e-09!4;UBERON:0005058!7.70e-09!4;UBERON:0009113!7.70e-09!4;UBERON:0003295!7.70e-09!4;UBERON:0005562!7.70e-09!4;UBERON:0002193!2.74e-07!112;UBERON:0002390!3.23e-07!102;UBERON:0003061!3.23e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.04e-15;15!UBERON:0000179;1.04e-15;15!UBERON:0000463;1.04e-15;15!UBERON:0002390;3.06e-09;32!UBERON:0002370;1.08e-07;2!UBERON:0005058;1.08e-07;2!UBERON:0009113;1.08e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.04e-15,15;UBERON:0000179,1.04e-15,15;UBERON:0000463,1.04e-15,15;UBERON:0002370,4.01e-14,4;UBERON:0005058,4.01e-14,4;UBERON:0009113,4.01e-14,4;UBERON:0003295,4.01e-14,4;UBERON:0005562,4.01e-14,4;UBERON:0003351,1.98e-09,6;UBERON:0001042,2.87e-08,10;UBERON:0009145,2.87e-08,10;UBERON:0004177,4.39e-08,7;UBERON:0005057,4.39e-08,7;UBERON:0006562,1.74e-07,11 | |||
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| ||
|short_description=p2@ICOS | |short_description=p2@ICOS | ||
}} | }} |
Latest revision as of 16:21, 19 September 2015
Short description: | p2@ICOS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ICOS_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 12bp_to_ENST00000435193_5end |
EntrezGene: | ICOS |
HGNC: | 5351 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.04e-15 | 15 |
haemolymphatic fluid | 1.04e-15 | 15 |
organism substance | 1.04e-15 | 15 |
thymus | 4.01e-14 | 4 |
hemolymphoid system gland | 4.01e-14 | 4 |
thymic region | 4.01e-14 | 4 |
pharyngeal gland | 4.01e-14 | 4 |
thymus primordium | 4.01e-14 | 4 |
pharyngeal epithelium | 1.98e-09 | 6 |
chordate pharynx | 2.87e-08 | 10 |
pharyngeal region of foregut | 2.87e-08 | 10 |
hemopoietic organ | 4.39e-08 | 7 |
immune organ | 4.39e-08 | 7 |
pharynx | 1.74e-07 | 11 |