FFCP PHASE1:Hg19::chr8:9953092..9953097,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4482 | |EntrezGene=4482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7377 | |HGNC=7377 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJ68 | |UniProt=Q9UJ68 | ||
|association_with_transcript=26bp_to_NM_001135671,NM_001199729,uc003wsy.2,uc003wsz.2,uc011kwy.1_5end | |association_with_transcript=26bp_to_NM_001135671,NM_001199729,uc003wsy.2,uc003wsz.2,uc011kwy.1_5end | ||
|cluster_id=chr8:9953092..9953097,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_21_at_MSRA_5end | |description=CAGE_peak_21_at_MSRA_5end | ||
|id=chr8:9953092..9953097,+ | |id=chr8:9953092..9953097,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.40e-147;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;3.31e-74;6!UBERON:0002680;6.62e-50;9!UBERON:0001895;6.62e-50;9!UBERON:0004733;9.76e-38;12!UBERON:0002028;9.76e-38;12!UBERON:0004732;6.32e-35;13!UBERON:0002021;3.26e-11;5!UBERON:0000073;1.53e-10;53!UBERON:0002616;1.53e-10;53!UBERON:0001016;8.73e-09;83!UBERON:0000955;1.27e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.58e-74,6;UBERON:0006215,2.58e-74,6;UBERON:0002680,5.60e-50,9;UBERON:0001895,5.60e-50,9;UBERON:0010092,5.60e-50,9;UBERON:0004733,8.61e-38,12;UBERON:0002028,8.61e-38,12;UBERON:0007277,8.61e-38,12;UBERON:0004732,5.63e-35,13;UBERON:0003076,1.81e-30,15;UBERON:0003057,1.81e-30,15;UBERON:0000073,1.70e-15,53;UBERON:0002616,1.70e-15,53;UBERON:0001049,9.92e-15,56;UBERON:0005068,9.92e-15,56;UBERON:0006241,9.92e-15,56;UBERON:0007135,9.92e-15,56;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0002021,3.60e-11,5;UBERON:0001017,2.17e-10,81;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0001016,1.88e-09,89;UBERON:0010371,2.22e-08,104;UBERON:0010314,8.99e-07,132 | |||
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|short_description=p21@MSRA | |short_description=p21@MSRA | ||
}} | }} |
Latest revision as of 16:59, 19 September 2015
Short description: | p21@MSRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_MSRA_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 26bp_to_NM_001135671, NM_001199729, uc003wsy.2, uc003wsz.2, uc011kwy.1_5end |
EntrezGene: | MSRA |
HGNC: | 7377 |
UniProt: | Q9UJ68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.58e-74 | 6 |
rhombic lip | 2.58e-74 | 6 |
regional part of metencephalon | 5.60e-50 | 9 |
metencephalon | 5.60e-50 | 9 |
future metencephalon | 5.60e-50 | 9 |
segmental subdivision of hindbrain | 8.61e-38 | 12 |
hindbrain | 8.61e-38 | 12 |
presumptive hindbrain | 8.61e-38 | 12 |
segmental subdivision of nervous system | 5.63e-35 | 13 |
posterior neural tube | 1.81e-30 | 15 |
chordal neural plate | 1.81e-30 | 15 |
regional part of nervous system | 1.70e-15 | 53 |
regional part of brain | 1.70e-15 | 53 |
neural tube | 9.92e-15 | 56 |
neural rod | 9.92e-15 | 56 |
future spinal cord | 9.92e-15 | 56 |
neural keel | 9.92e-15 | 56 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
occipital lobe | 3.60e-11 | 5 |
central nervous system | 2.17e-10 | 81 |
neural plate | 2.17e-10 | 82 |
presumptive neural plate | 2.17e-10 | 82 |
neurectoderm | 5.98e-10 | 86 |
nervous system | 1.88e-09 | 89 |
ecto-epithelium | 2.22e-08 | 104 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |