FFCP PHASE1:Hg19::chr5:112043148..112043155,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=324 | |EntrezGene=324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=583 | |HGNC=583 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFL6 | |UniProt=D6RFL6 | ||
|association_with_transcript=-39bp_to_ENST00000509732_5end | |association_with_transcript=-39bp_to_ENST00000509732_5end | ||
|cluster_id=chr5:112043148..112043155,+ | |||
|coexpression_cluster_id=C376 | |coexpression_cluster_id=C376 | ||
|description=CAGE_peak_14_at_APC_5end | |description=CAGE_peak_14_at_APC_5end | ||
|id=chr5:112043148..112043155,+ | |id=chr5:112043148..112043155,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.45e-18;3!UBERON:0006601;6.24e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p14@APC | |short_description=p14@APC | ||
}} | }} |
Latest revision as of 18:02, 19 September 2015
Short description: | p14@APC |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_APC_5end |
Coexpression cluster: | C376_brain_temporal_insula_frontal_occipital_postcentral_paracentral |
Association with transcript: | -39bp_to_ENST00000509732_5end |
EntrezGene: | APC |
HGNC: | 583 |
UniProt: | D6RFL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 6.41e-23 | 9 |
metencephalon | 6.41e-23 | 9 |
future metencephalon | 6.41e-23 | 9 |
pons | 1.12e-17 | 3 |
segmental subdivision of hindbrain | 1.71e-17 | 12 |
hindbrain | 1.71e-17 | 12 |
presumptive hindbrain | 1.71e-17 | 12 |
segmental subdivision of nervous system | 3.07e-16 | 13 |
posterior neural tube | 3.15e-14 | 15 |
chordal neural plate | 3.15e-14 | 15 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
occipital lobe | 3.26e-11 | 5 |
central nervous system | 2.17e-10 | 81 |
cerebellum | 1.32e-09 | 6 |
rhombic lip | 1.32e-09 | 6 |
brainstem | 1.57e-09 | 6 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
neural tube | 1.07e-08 | 56 |
neural rod | 1.07e-08 | 56 |
future spinal cord | 1.07e-08 | 56 |
neural keel | 1.07e-08 | 56 |