FFCP PHASE1:Hg19::chr22:31503490..31503584,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140606 | |EntrezGene=140606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWX9 | |UniProt=Q8WWX9 | ||
|association_with_transcript=0bp_to_ENST00000400299,ENST00000460642,ENST00000465447,ENST00000465536,ENST00000490967,ENST00000491958,NM_080430,uc011ali.1_5end | |association_with_transcript=0bp_to_ENST00000400299,ENST00000460642,ENST00000465447,ENST00000465536,ENST00000490967,ENST00000491958,NM_080430,uc011ali.1_5end | ||
|cluster_id=chr22:31503490..31503584,- | |||
|coexpression_cluster_id=C1353 | |||
|description=CAGE_peak_1_at_SELM_5end | |description=CAGE_peak_1_at_SELM_5end | ||
|id=chr22:31503490..31503584,- | |id=chr22:31503490..31503584,- | ||
|ontology_enrichment_celltype=CL:0000055!1.29e-26!180;CL:0000680!1.69e-20!57;CL:0000056!1.69e-20!57;CL:0000355!1.69e-20!57;CL:0000183!5.80e-20!59;CL:0000192!6.81e-20!42;CL:0000514!6.81e-20!42;CL:0000187!2.19e-19!54;CL:0000359!1.04e-16!32;CL:0000393!6.09e-16!60;CL:0000211!6.09e-16!60;CL:0000222!1.91e-15!119;CL:0000057!5.08e-14!75;CL:0000220!3.99e-07!246;CL:0000136!4.13e-07!15;CL:0002321!7.51e-07!248 | |ontology_enrichment_celltype=CL:0000055!1.29e-26!180;CL:0000680!1.69e-20!57;CL:0000056!1.69e-20!57;CL:0000355!1.69e-20!57;CL:0000183!5.80e-20!59;CL:0000192!6.81e-20!42;CL:0000514!6.81e-20!42;CL:0000187!2.19e-19!54;CL:0000359!1.04e-16!32;CL:0000393!6.09e-16!60;CL:0000211!6.09e-16!60;CL:0000222!1.91e-15!119;CL:0000057!5.08e-14!75;CL:0000220!3.99e-07!246;CL:0000136!4.13e-07!15;CL:0002321!7.51e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.82e-16;32!CL:0000192;2.45e-14;43!CL:0000187;1.54e-10;55!CL:0000393;2.79e-08;61!CL:0000211;2.79e-08;61!CL:0000134;3.92e-08;55!CL:0000723;9.36e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.08e-20,58;CL:0000056,1.08e-20,58;CL:0000355,1.08e-20,58;CL:0000192,4.73e-20,43;CL:0000514,4.73e-20,43;CL:0000187,1.40e-19,55;CL:0000359,1.03e-16,32;CL:0000393,3.79e-16,61;CL:0000211,3.79e-16,61;CL:0000222,1.93e-15,121;CL:0000057,1.72e-14,76;CL:0000136,4.10e-07,15;CL:0002321,7.94e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;2.45e-14;43!CL:0000355;8.25e-11;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.30e-23!83;UBERON:0002329!8.30e-23!83;UBERON:0003077!8.30e-23!83;UBERON:0003059!8.30e-23!83;UBERON:0007282!8.30e-23!83;UBERON:0009618!8.30e-23!83;UBERON:0007285!8.30e-23!83;UBERON:0004290!1.91e-20!70;UBERON:0000475!1.94e-20!365;UBERON:0002385!4.49e-20!63;UBERON:0001015!4.49e-20!63;UBERON:0000383!4.49e-20!63;UBERON:0001134!9.82e-20!61;UBERON:0002036!9.82e-20!61;UBERON:0003082!9.82e-20!61;UBERON:0004872!3.17e-18!84;UBERON:0000486!3.74e-18!82;UBERON:0002049!3.16e-17!79;UBERON:0007798!3.16e-17!79;UBERON:0005256!1.10e-16!143;UBERON:0001637!3.76e-16!42;UBERON:0003509!3.76e-16!42;UBERON:0004572!3.76e-16!42;UBERON:0002100!4.99e-16!216;UBERON:0001981!2.62e-15!60;UBERON:0007500!2.62e-15!60;UBERON:0004537!2.62e-15!60;UBERON:0006965!2.62e-15!60;UBERON:0000055!2.69e-15!69;UBERON:0000481!6.95e-14!347;UBERON:0004573!1.96e-13!33;UBERON:0004571!1.96e-13!33;UBERON:0001009!2.24e-13!113;UBERON:0004535!4.24e-13!110;UBERON:0003914!2.06e-11!118;UBERON:0000490!3.49e-11!138;UBERON:0004111!3.58e-11!241;UBERON:0000483!1.17e-10!309;UBERON:0000477!1.56e-10!286;UBERON:0000119!1.59e-10!312;UBERON:0003104!7.97e-10!238;UBERON:0009142!7.97e-10!238;UBERON:0000468!2.18e-09!659;UBERON:0003102!8.41e-08!95;UBERON:0001135!1.05e-07!15;UBERON:0000025!1.26e-07!194;UBERON:0000467!1.44e-07!625;UBERON:0000480!1.65e-07!626;UBERON:0000947!3.52e-07!21;UBERON:0010191!3.52e-07!21;UBERON:0001013!8.61e-07!14;UBERON:0007100!8.78e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.00e-12;33!UBERON:0004571;5.00e-12;33!UBERON:0001637;2.39e-11;42!UBERON:0003509;2.39e-11;42!UBERON:0004572;2.39e-11;42!UBERON:0007500;4.88e-08;56!UBERON:0001981;4.88e-08;56!UBERON:0004537;4.88e-08;56!UBERON:0001135;1.04e-07;15!UBERON:0002385;2.42e-07;31!UBERON:0001015;2.42e-07;31!UBERON:0000383;2.42e-07;31!UBERON:0000947;3.46e-07;21!UBERON:0010191;3.46e-07;21!UBERON:0000055;5.91e-07;65!UBERON:0002049;7.52e-07;75!UBERON:0007798;7.52e-07;75!UBERON:0001013;8.41e-07;14 | |||
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| ||
|short_description=p1@SELM | |short_description=p1@SELM | ||
}} | }} |
Latest revision as of 19:32, 19 September 2015
Short description: | p1@SELM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SELM_5end |
Coexpression cluster: | C1353_Mesenchymal_Preadipocyte_basal_Adipocyte_Fibroblast_Smooth_leiomyoma |
Association with transcript: | 0bp_to_ENST00000400299, ENST00000460642, ENST00000465447, ENST00000465536, ENST00000490967, ENST00000491958, NM_080430, uc011ali.1_5end |
EntrezGene: | SELM |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.08e-20 | 58 |
myoblast | 1.08e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.08e-20 | 58 |
smooth muscle cell | 4.73e-20 | 43 |
smooth muscle myoblast | 4.73e-20 | 43 |
muscle cell | 1.40e-19 | 55 |
vascular associated smooth muscle cell | 1.03e-16 | 32 |
electrically responsive cell | 3.79e-16 | 61 |
electrically active cell | 3.79e-16 | 61 |
mesodermal cell | 1.93e-15 | 121 |
fibroblast | 1.72e-14 | 76 |
fat cell | 4.10e-07 | 15 |
embryonic cell | 7.94e-07 | 250 |