FFCP PHASE1:Hg19::chr17:37356528..37356547,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:37356528..37356547,+
|short_description=p2@RPL19
|description=CAGE_peak_2_at_RPL19_5end
|association_with_transcript=0bp_to_ENST00000225430,NM_000981,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6143 | |EntrezGene=6143 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10312 | |HGNC=10312 | ||
|TSSclassifier=strong | |||
|UniProt=P84098 | |UniProt=P84098 | ||
|association_with_transcript=0bp_to_ENST00000225430,NM_000981,uc002hrq.1_5end | |||
|cluster_id=chr17:37356528..37356547,+ | |||
|description=CAGE_peak_2_at_RPL19_5end | |||
|id=chr17:37356528..37356547,+ | |||
|ontology_enrichment_celltype=CL:0000220!2.10e-26!246;CL:0002321!4.17e-26!248;CL:0000055!9.75e-25!180;CL:0000548!2.98e-23!679;CL:0000004!2.98e-23!679;CL:0000255!2.98e-23!679;CL:0000012!5.72e-23!682;CL:0000680!8.80e-23!57;CL:0000056!8.80e-23!57;CL:0000355!8.80e-23!57;CL:0000187!2.60e-22!54;CL:0000183!6.95e-22!59;CL:0000222!1.37e-21!119;CL:0000393!1.57e-21!60;CL:0000211!1.57e-21!60;CL:0000192!4.07e-20!42;CL:0000514!4.07e-20!42;CL:0000359!2.25e-16!32;CL:0000144!1.41e-14!625;CL:0000066!2.02e-12!254;CL:0002371!4.31e-12!591;CL:0000003!1.10e-10!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.60e-15;32!CL:0000192;1.66e-13;43!CL:0000187;2.49e-12;55!CL:0000393;1.90e-10;61!CL:0000211;1.90e-10;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.33e-26,250;CL:0000680,3.46e-22,58;CL:0000056,3.46e-22,58;CL:0000355,3.46e-22,58;CL:0000187,1.06e-21,55;CL:0000222,1.44e-21,121;CL:0000393,5.51e-21,61;CL:0000211,5.51e-21,61;CL:0000192,1.96e-19,43;CL:0000514,1.96e-19,43;CL:0000359,2.25e-16,32;CL:0000066,1.50e-12,253 | |||
|ontology_enrichment_development_v019=CL:0000514;1.66e-13;43!CL:0000355;7.81e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.00e-24!83;UBERON:0002329!4.00e-24!83;UBERON:0003077!4.00e-24!83;UBERON:0003059!4.00e-24!83;UBERON:0007282!4.00e-24!83;UBERON:0009618!4.00e-24!83;UBERON:0007285!4.00e-24!83;UBERON:0000486!7.22e-24!82;UBERON:0004290!7.00e-23!70;UBERON:0001134!8.86e-20!61;UBERON:0002036!8.86e-20!61;UBERON:0003082!8.86e-20!61;UBERON:0003104!5.61e-19!238;UBERON:0009142!5.61e-19!238;UBERON:0005256!1.24e-18!143;UBERON:0002385!3.96e-18!63;UBERON:0001015!3.96e-18!63;UBERON:0000383!3.96e-18!63;UBERON:0002100!8.48e-18!216;UBERON:0000490!3.02e-16!138;UBERON:0001637!8.52e-14!42;UBERON:0003509!8.52e-14!42;UBERON:0004572!8.52e-14!42;UBERON:0000481!2.53e-13!347;UBERON:0002049!5.68e-13!79;UBERON:0007798!5.68e-13!79;UBERON:0004872!7.26e-13!84;UBERON:0000119!7.32e-13!312;UBERON:0001981!8.53e-13!60;UBERON:0007500!8.53e-13!60;UBERON:0004537!8.53e-13!60;UBERON:0006965!8.53e-13!60;UBERON:0000483!1.32e-12!309;UBERON:0003914!5.45e-12!118;UBERON:0000055!2.40e-11!69;UBERON:0000475!2.95e-11!365;UBERON:0004573!4.09e-10!33;UBERON:0004571!4.09e-10!33;UBERON:0001048!1.49e-07!168;UBERON:0000072!2.93e-07!46;UBERON:0008947!3.07e-07!38;UBERON:0003258!3.07e-07!38;UBERON:0004535!3.38e-07!110;UBERON:0001009!4.34e-07!113;UBERON:0001737!5.96e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.20e-09;42!UBERON:0003509;2.20e-09;42!UBERON:0004572;2.20e-09;42!UBERON:0004573;4.21e-09;33!UBERON:0004571;4.21e-09;33!UBERON:0007500;1.42e-08;56!UBERON:0001981;1.42e-08;56!UBERON:0004537;1.42e-08;56!UBERON:0000072;6.01e-08;37!UBERON:0001737;5.74e-07;9!UBERON:0001557;5.74e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.10e-23,83;UBERON:0002329,2.25e-22,71;UBERON:0003059,2.25e-22,71;UBERON:0007282,2.25e-22,71;UBERON:0004290,2.25e-22,71;UBERON:0009618,2.25e-22,71;UBERON:0003077,6.88e-22,72;UBERON:0007285,6.88e-22,72;UBERON:0007524,8.48e-22,73;UBERON:0007503,1.30e-21,78;UBERON:0001134,2.81e-19,62;UBERON:0002036,2.81e-19,62;UBERON:0003082,2.81e-19,62;UBERON:0000490,9.22e-19,148;UBERON:0002385,1.13e-17,64;UBERON:0001015,1.13e-17,64;UBERON:0000383,1.13e-17,64;UBERON:0002100,9.38e-17,199;UBERON:0005256,5.21e-16,122;UBERON:0003104,3.15e-14,160;UBERON:0009142,3.15e-14,160;UBERON:0001637,8.52e-14,42;UBERON:0003509,8.52e-14,42;UBERON:0004572,8.52e-14,42;UBERON:0000119,4.00e-13,309;UBERON:0000483,7.23e-13,306;UBERON:0002049,8.18e-13,78;UBERON:0007798,8.18e-13,78;UBERON:0004872,1.05e-12,83;UBERON:0007500,1.21e-12,59;UBERON:0001981,1.21e-12,59;UBERON:0004537,1.21e-12,59;UBERON:0006965,1.21e-12,59;UBERON:0003914,3.36e-12,117;UBERON:0000055,3.42e-11,68;UBERON:0004573,4.09e-10,33;UBERON:0004571,4.09e-10,33;UBERON:0008947,3.07e-07,38;UBERON:0003258,3.07e-07,38;UBERON:0001048,4.42e-07,160;UBERON:0004535,4.57e-07,109;UBERON:0000072,5.37e-07,47;UBERON:0001009,5.85e-07,112;UBERON:0001737,5.96e-07,9 | |||
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| ||
|short_description=p2@RPL19 | |||
}} | }} |
Latest revision as of 21:24, 19 September 2015
Short description: | p2@RPL19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL19_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000225430, NM_000981, uc002hrq.1_5end |
EntrezGene: | RPL19 |
HGNC: | 10312 |
UniProt: | P84098 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.33e-26 | 250 |
muscle precursor cell | 3.46e-22 | 58 |
myoblast | 3.46e-22 | 58 |
multi-potent skeletal muscle stem cell | 3.46e-22 | 58 |
muscle cell | 1.06e-21 | 55 |
mesodermal cell | 1.44e-21 | 121 |
electrically responsive cell | 5.51e-21 | 61 |
electrically active cell | 5.51e-21 | 61 |
smooth muscle cell | 1.96e-19 | 43 |
smooth muscle myoblast | 1.96e-19 | 43 |
vascular associated smooth muscle cell | 2.25e-16 | 32 |
epithelial cell | 1.50e-12 | 253 |