FFCP PHASE1:Hg19::chr22:32352954..32352965,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:32352954..32352965,+
|short_description=p17@YWHAH
|description=CAGE_peak_17_at_YWHAH_5end
|association_with_transcript=-218bp_to_L08439_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7533 | |EntrezGene=7533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12853 | |HGNC=12853 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-218bp_to_L08439_5end | |||
|cluster_id=chr22:32352954..32352965,+ | |||
|description=CAGE_peak_17_at_YWHAH_5end | |||
|id=chr22:32352954..32352965,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;5.92e-07;6!CL:0000404;5.92e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.26e-07,6;CL:0000031,4.26e-07,6;CL:0000404,4.26e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;5.92e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.54e-13!82;UBERON:0001049!1.23e-12!57;UBERON:0005068!1.23e-12!57;UBERON:0006241!1.23e-12!57;UBERON:0007135!1.23e-12!57;UBERON:0005743!1.95e-12!86;UBERON:0002619!4.43e-12!22;UBERON:0000956!4.81e-12!25;UBERON:0000203!4.81e-12!25;UBERON:0002780!2.44e-11!41;UBERON:0001890!2.44e-11!41;UBERON:0006240!2.44e-11!41;UBERON:0001869!6.06e-11!32;UBERON:0001893!7.02e-11!34;UBERON:0001950!7.83e-11!20;UBERON:0003080!9.17e-11!42;UBERON:0002616!1.84e-10!59;UBERON:0002791!1.92e-10!33;UBERON:0002020!2.55e-10!34;UBERON:0003528!2.55e-10!34;UBERON:0000073!3.22e-10!94;UBERON:0001016!3.22e-10!94;UBERON:0000955!1.09e-09!69;UBERON:0006238!1.09e-09!69;UBERON:0002346!4.53e-09!90;UBERON:0003075!2.85e-08!86;UBERON:0007284!2.85e-08!86;UBERON:0003056!1.35e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.47e-24;22!UBERON:0000956;1.28e-21;25!UBERON:0000203;1.28e-21;25!UBERON:0001950;1.18e-20;20!UBERON:0002021;6.94e-17;5!UBERON:0001869;1.86e-16;32!UBERON:0002791;1.21e-15;32!UBERON:0001893;2.20e-14;34!UBERON:0003528;2.08e-13;34!UBERON:0002020;2.08e-13;34!UBERON:0002780;2.43e-12;41!UBERON:0001890;2.43e-12;41!UBERON:0001872;2.36e-08;5!UBERON:0000073;2.60e-08;53!UBERON:0002616;2.60e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.02e-24,22;UBERON:0000956,1.70e-21,25;UBERON:0000203,1.70e-21,25;UBERON:0001950,1.60e-20,20;UBERON:0002791,9.81e-17,32;UBERON:0001869,9.81e-17,32;UBERON:0002021,1.08e-16,5;UBERON:0001017,1.63e-16,81;UBERON:0002780,2.04e-16,41;UBERON:0001890,2.04e-16,41;UBERON:0003080,2.04e-16,41;UBERON:0006240,2.04e-16,41;UBERON:0003528,1.01e-15,34;UBERON:0002020,1.01e-15,34;UBERON:0001893,1.01e-15,34;UBERON:0000073,1.73e-15,53;UBERON:0002616,1.73e-15,53;UBERON:0001016,1.09e-14,89;UBERON:0001049,1.35e-14,56;UBERON:0005068,1.35e-14,56;UBERON:0006241,1.35e-14,56;UBERON:0007135,1.35e-14,56;UBERON:0000955,1.32e-11,68;UBERON:0006238,1.32e-11,68;UBERON:0003056,1.02e-10,61;UBERON:0003075,1.50e-09,82;UBERON:0007284,1.50e-09,82;UBERON:0004121,2.52e-09,171;UBERON:0000924,2.52e-09,171;UBERON:0006601,2.52e-09,171;UBERON:0002346,4.84e-09,86;UBERON:0010371,7.77e-09,104;UBERON:0001872,2.63e-08,5 | |||
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| ||
|short_description=p17@YWHAH | |||
}} | }} |
Latest revision as of 21:34, 19 September 2015
Short description: | p17@YWHAH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_YWHAH_5end |
Coexpression cluster: | NA |
Association with transcript: | -218bp_to_L08439_5end |
EntrezGene: | YWHAH |
HGNC: | 12853 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.26e-07 | 6 |
neuroblast | 4.26e-07 | 6 |
electrically signaling cell | 4.26e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.02e-24 | 22 |
cerebral cortex | 1.70e-21 | 25 |
pallium | 1.70e-21 | 25 |
neocortex | 1.60e-20 | 20 |
regional part of telencephalon | 9.81e-17 | 32 |
cerebral hemisphere | 9.81e-17 | 32 |
occipital lobe | 1.08e-16 | 5 |
central nervous system | 1.63e-16 | 81 |
regional part of forebrain | 2.04e-16 | 41 |
forebrain | 2.04e-16 | 41 |
anterior neural tube | 2.04e-16 | 41 |
future forebrain | 2.04e-16 | 41 |
brain grey matter | 1.01e-15 | 34 |
gray matter | 1.01e-15 | 34 |
telencephalon | 1.01e-15 | 34 |
regional part of nervous system | 1.73e-15 | 53 |
regional part of brain | 1.73e-15 | 53 |
nervous system | 1.09e-14 | 89 |
neural tube | 1.35e-14 | 56 |
neural rod | 1.35e-14 | 56 |
future spinal cord | 1.35e-14 | 56 |
neural keel | 1.35e-14 | 56 |
brain | 1.32e-11 | 68 |
future brain | 1.32e-11 | 68 |
pre-chordal neural plate | 1.02e-10 | 61 |
neural plate | 1.50e-09 | 82 |
presumptive neural plate | 1.50e-09 | 82 |
ectoderm-derived structure | 2.52e-09 | 171 |
ectoderm | 2.52e-09 | 171 |
presumptive ectoderm | 2.52e-09 | 171 |
neurectoderm | 4.84e-09 | 86 |
ecto-epithelium | 7.77e-09 | 104 |
parietal lobe | 2.63e-08 | 5 |