FFCP PHASE1:Hg19::chr22:32352954..32352965,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7533 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12853 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-218bp_to_L08439_5end | |||
|cluster_id=chr22:32352954..32352965,+ | |||
|description=CAGE_peak_17_at_YWHAH_5end | |||
|id=chr22:32352954..32352965,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;5.92e-07;6!CL:0000404;5.92e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.26e-07,6;CL:0000031,4.26e-07,6;CL:0000404,4.26e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;5.92e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.54e-13!82;UBERON:0001049!1.23e-12!57;UBERON:0005068!1.23e-12!57;UBERON:0006241!1.23e-12!57;UBERON:0007135!1.23e-12!57;UBERON:0005743!1.95e-12!86;UBERON:0002619!4.43e-12!22;UBERON:0000956!4.81e-12!25;UBERON:0000203!4.81e-12!25;UBERON:0002780!2.44e-11!41;UBERON:0001890!2.44e-11!41;UBERON:0006240!2.44e-11!41;UBERON:0001869!6.06e-11!32;UBERON:0001893!7.02e-11!34;UBERON:0001950!7.83e-11!20;UBERON:0003080!9.17e-11!42;UBERON:0002616!1.84e-10!59;UBERON:0002791!1.92e-10!33;UBERON:0002020!2.55e-10!34;UBERON:0003528!2.55e-10!34;UBERON:0000073!3.22e-10!94;UBERON:0001016!3.22e-10!94;UBERON:0000955!1.09e-09!69;UBERON:0006238!1.09e-09!69;UBERON:0002346!4.53e-09!90;UBERON:0003075!2.85e-08!86;UBERON:0007284!2.85e-08!86;UBERON:0003056!1.35e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.47e-24;22!UBERON:0000956;1.28e-21;25!UBERON:0000203;1.28e-21;25!UBERON:0001950;1.18e-20;20!UBERON:0002021;6.94e-17;5!UBERON:0001869;1.86e-16;32!UBERON:0002791;1.21e-15;32!UBERON:0001893;2.20e-14;34!UBERON:0003528;2.08e-13;34!UBERON:0002020;2.08e-13;34!UBERON:0002780;2.43e-12;41!UBERON:0001890;2.43e-12;41!UBERON:0001872;2.36e-08;5!UBERON:0000073;2.60e-08;53!UBERON:0002616;2.60e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.02e-24,22;UBERON:0000956,1.70e-21,25;UBERON:0000203,1.70e-21,25;UBERON:0001950,1.60e-20,20;UBERON:0002791,9.81e-17,32;UBERON:0001869,9.81e-17,32;UBERON:0002021,1.08e-16,5;UBERON:0001017,1.63e-16,81;UBERON:0002780,2.04e-16,41;UBERON:0001890,2.04e-16,41;UBERON:0003080,2.04e-16,41;UBERON:0006240,2.04e-16,41;UBERON:0003528,1.01e-15,34;UBERON:0002020,1.01e-15,34;UBERON:0001893,1.01e-15,34;UBERON:0000073,1.73e-15,53;UBERON:0002616,1.73e-15,53;UBERON:0001016,1.09e-14,89;UBERON:0001049,1.35e-14,56;UBERON:0005068,1.35e-14,56;UBERON:0006241,1.35e-14,56;UBERON:0007135,1.35e-14,56;UBERON:0000955,1.32e-11,68;UBERON:0006238,1.32e-11,68;UBERON:0003056,1.02e-10,61;UBERON:0003075,1.50e-09,82;UBERON:0007284,1.50e-09,82;UBERON:0004121,2.52e-09,171;UBERON:0000924,2.52e-09,171;UBERON:0006601,2.52e-09,171;UBERON:0002346,4.84e-09,86;UBERON:0010371,7.77e-09,104;UBERON:0001872,2.63e-08,5 | |||
|phase1_expression=0,0.856402095563933,0.281908808191942,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0,0,0.626909442956176,0,0.684372125364421,0.251085279189606,0.152826811495903,0,0,0,0,0,0,0,0,0,0.568676929949686,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.376484679085209,0.272906150057846,0,0.612167784741805,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0.32592226663359,0,0,0.222820913770347,0,0,0.270803863765016,0.25618263945135,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0.434539556882471,0,0,0.0945348171640679,0,0.175669571386252,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0.24666754841716,0,0.404132016209064,0,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.323745888736263,0.280901613404497,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0.30648779579902,0,0.340296549480063,0,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0.558350568994769,0,0.194874010322397,0.252433774244115,0,0.161646056818812,0,0.302256294682921,0.339121184620975,0.193260853163297,0.272746120590835,0,0,0.397589304964456,0.116193942869518,0.310983165046111,0.756962552626885,0.36497735907583,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0,0,0,0.441175890929576,0,0.474541238222193,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.122988438543114,0,0.439001141634502,0,0.402115889646523,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,1.04007436911366,0.514414748524284,0,0.266422179016099,0,0,0.823240336780769,0.977208552881205,0,0,0.301439377059586,0,0.299918973546171,0,1.00451418286425,0,0.479249710983165,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,0.254094624222463,0,1.54657762555539,0.167516265334349,0.637938751653163,0.749007023947182,0,0.414415513436035,0,0,0.271265023699736,0,0.356857977594324,0.315404830067869,0,0,0,1.03473071292505,0,0,0.260650843404249,0.391602314925481,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0.153461973288062,0.841980283299221,0,0.511707249066704,0.965123526861645,0,0.308419387605311,0.177561725313127,0.0821271560138091,0.519254429183621,0.232420756919918,0.120859449591622,0,0.0920809889358963,0.34444334449382,0.910455840033585,0.262248829918848,0,0.231046011313244,0,0,0,0,0.170093705276516,0.863663664408557,0,0,0,0.509752546090077,0,0.447749509444357,0.438519753291869,0.261435451024901,0,0,0.325378394664303,0,0.183138929636687,0.165018999841176,0,0.650060246036521,0,0.096670718292122,0.308097234229289,0,0.551346289938122,0.107420244868274,0.290033387828457,0.426133137080504,0,0.165284915360978,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0.487426979262569,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0,1.239293992399,0,0.143411352204052,0.0982490410131212,0.35667105148125,0.354761064070598,0,0,0,0,0,0.670302275535787,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0.144269212976445,0.0711418433484141,0.159426272728822,0.199579371432817,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,0.169291777801603,0.321176150207399,0,0,0,0.614481528616916,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.984685914873589,0.111308705022906,0.16480387422676,0.422250816255987,0.597743964753209,0.276283915531148,0,0.409074730008619,0,0,0.0898683511473268,0,0,0,0,0,0,0.74214478529481,0,0.260427761085233,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625408,1.52581736317083,0.331737779793674,0.295547618953547,1.09692698576986,0,0,0,0.113942055847001,0.23056390438806,0.179515288819544,0.325942115766024,0.31900115973192,0.0915975934018623,0,1.02193298195737,0.156980256395025,0,0,0.19606253431774,0,0.37950746544837,0.158936578980379,0.843992258112108,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,1.22429104652196,0,0,0.103688191397247,0,0,0,0,0,0.554698692052555,0.520679215005393,0,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0,0.164230914106418,0,0,0.451961481561065,0.411125773940253,0.19871461170299,0.569797163602908,0,0,0.213452994739353,0,0,0.229073192331831,0,0.576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| |||
|short_description=p17@YWHAH | |||
}} |
Latest revision as of 21:34, 19 September 2015
Short description: | p17@YWHAH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_YWHAH_5end |
Coexpression cluster: | NA |
Association with transcript: | -218bp_to_L08439_5end |
EntrezGene: | YWHAH |
HGNC: | 12853 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.26e-07 | 6 |
neuroblast | 4.26e-07 | 6 |
electrically signaling cell | 4.26e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.02e-24 | 22 |
cerebral cortex | 1.70e-21 | 25 |
pallium | 1.70e-21 | 25 |
neocortex | 1.60e-20 | 20 |
regional part of telencephalon | 9.81e-17 | 32 |
cerebral hemisphere | 9.81e-17 | 32 |
occipital lobe | 1.08e-16 | 5 |
central nervous system | 1.63e-16 | 81 |
regional part of forebrain | 2.04e-16 | 41 |
forebrain | 2.04e-16 | 41 |
anterior neural tube | 2.04e-16 | 41 |
future forebrain | 2.04e-16 | 41 |
brain grey matter | 1.01e-15 | 34 |
gray matter | 1.01e-15 | 34 |
telencephalon | 1.01e-15 | 34 |
regional part of nervous system | 1.73e-15 | 53 |
regional part of brain | 1.73e-15 | 53 |
nervous system | 1.09e-14 | 89 |
neural tube | 1.35e-14 | 56 |
neural rod | 1.35e-14 | 56 |
future spinal cord | 1.35e-14 | 56 |
neural keel | 1.35e-14 | 56 |
brain | 1.32e-11 | 68 |
future brain | 1.32e-11 | 68 |
pre-chordal neural plate | 1.02e-10 | 61 |
neural plate | 1.50e-09 | 82 |
presumptive neural plate | 1.50e-09 | 82 |
ectoderm-derived structure | 2.52e-09 | 171 |
ectoderm | 2.52e-09 | 171 |
presumptive ectoderm | 2.52e-09 | 171 |
neurectoderm | 4.84e-09 | 86 |
ecto-epithelium | 7.77e-09 | 104 |
parietal lobe | 2.63e-08 | 5 |