FFCP PHASE1:Hg19::chr18:55102598..55102623,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9480 | |EntrezGene=9480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8139 | |HGNC=8139 | ||
|TSSclassifier=strong | |||
|UniProt=O95948 | |UniProt=O95948 | ||
|association_with_transcript=-293bp_to_ENST00000262095,ENST00000491143,NM_004852,uc002lgo.2_5end | |association_with_transcript=-293bp_to_ENST00000262095,ENST00000491143,NM_004852,uc002lgo.2_5end | ||
|cluster_id=chr18:55102598..55102623,+ | |||
|description=CAGE_peak_1_at_ONECUT2_5end | |description=CAGE_peak_1_at_ONECUT2_5end | ||
|id=chr18:55102598..55102623,+ | |id=chr18:55102598..55102623,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.30e-08!254 | |ontology_enrichment_celltype=CL:0000066!2.30e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.33e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.78e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;8.18e-08;13!UBERON:0004161;9.11e-08;11!UBERON:0008947;1.43e-07;29!UBERON:0001041;2.96e-07;30 | |||
|ontology_enrichment_disease=DOID:162!4.73e-39!235;DOID:14566!2.29e-38!239;DOID:0050687!4.84e-38!143;DOID:305!1.29e-30!106;DOID:0050686!4.25e-15!137;DOID:299!4.02e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:305;2.21e-10;106!DOID:299;8.04e-10;25!DOID:0050687;6.66e-09;143!DOID:3119;2.03e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.79e-39,235;DOID:14566,2.28e-37,239;DOID:0050687,6.25e-36,143;DOID:305,1.70e-30,106;DOID:0050686,1.64e-18,137;DOID:299,6.31e-10,25;DOID:3119,2.20e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.90e-18!94;UBERON:0001016!2.90e-18!94;UBERON:0001017!9.21e-18!82;UBERON:0005743!6.07e-17!86;UBERON:0000955!2.30e-15!69;UBERON:0006238!2.30e-15!69;UBERON:0002780!2.28e-14!41;UBERON:0001890!2.28e-14!41;UBERON:0006240!2.28e-14!41;UBERON:0001049!4.79e-14!57;UBERON:0005068!4.79e-14!57;UBERON:0006241!4.79e-14!57;UBERON:0007135!4.79e-14!57;UBERON:0003080!1.23e-13!42;UBERON:0002346!1.14e-12!90;UBERON:0003075!1.32e-12!86;UBERON:0007284!1.32e-12!86;UBERON:0002616!4.23e-12!59;UBERON:0002020!1.13e-11!34;UBERON:0003528!1.13e-11!34;UBERON:0003056!1.79e-11!61;UBERON:0001893!2.53e-11!34;UBERON:0001869!2.53e-11!32;UBERON:0002791!5.87e-11!33;UBERON:0000924!1.17e-09!173;UBERON:0006601!1.17e-09!173;UBERON:0004121!1.78e-09!169;UBERON:0002619!1.21e-07!22;UBERON:0000956!1.87e-07!25;UBERON:0000203!1.87e-07!25;UBERON:0001950!2.30e-07!20;UBERON:0001737!5.08e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.81e-10;9!UBERON:0001557;9.81e-10;9!UBERON:0002780;7.79e-09;41!UBERON:0001890;7.79e-09;41!UBERON:0003528;8.66e-09;34!UBERON:0002020;8.66e-09;34!UBERON:0001869;1.04e-08;32!UBERON:0002423;2.69e-08;25!UBERON:0002791;3.44e-08;32!UBERON:0001893;1.07e-07;34!UBERON:0000125;2.88e-07;9!UBERON:0002308;2.88e-07;9!UBERON:0001950;3.08e-07;20!UBERON:0000955;3.91e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.14e-16,223;UBERON:0001016,1.25e-14,89;UBERON:0001017,3.53e-13,81;UBERON:0000955,2.71e-12,68;UBERON:0006238,2.71e-12,68;UBERON:0002780,7.92e-12,41;UBERON:0001890,7.92e-12,41;UBERON:0003080,7.92e-12,41;UBERON:0006240,7.92e-12,41;UBERON:0000073,2.45e-10,53;UBERON:0002616,2.45e-10,53;UBERON:0001737,1.07e-09,9;UBERON:0003528,1.15e-09,34;UBERON:0002020,1.15e-09,34;UBERON:0001869,1.21e-09,32;UBERON:0001049,2.67e-09,56;UBERON:0005068,2.67e-09,56;UBERON:0006241,2.67e-09,56;UBERON:0007135,2.67e-09,56;UBERON:0001893,1.03e-08,34;UBERON:0002791,1.10e-08,32;UBERON:0009497,2.42e-08,25;UBERON:0000015,2.42e-08,25;UBERON:0002423,2.42e-08,25;UBERON:0006235,2.42e-08,25;UBERON:0004161,2.42e-08,25;UBERON:0003056,8.31e-08,61;UBERON:0000125,2.12e-07,9;UBERON:0002308,2.12e-07,9;UBERON:0001950,3.95e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0.436882744260345,0,0,0,0,0,0,0,0.492484232307152,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0.344745680736619,0.645484683583826,2.70852973188684,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490385709340376,0,0,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0,0,0.710019185033229,0,0,0,0,0,1.70763188581434,0.662648841607426,1.2781333715647,1.86589899027667,1.26160425437814,0,0,0,0,0,0,9.46454400318751,11.2951742352328,10.1224632551062,10.0367515186478,11.3297310928051,8.77901290711057,9.03369764673102,11.5770664423954,9.23393176671337,0,0,0.4115740113314,0,19.0132552232746,10.8110993834539,14.1789577603537,0,1.22988438543114,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0.231860809950154,0.352226082707465,0.144366447761074,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0,0,0,1.41849132023278,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8277978602268,7.8083912314573,1.54657762555539,1.00509759200609,1.27587750330633,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,3.10419213877515,0,0.368738337083406,0,0,0,0,0.215714200818617,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,1.0877350463246,0.40101294060657,0.184161977871793,0,0.364182336013434,0,0,0,0.784349769176855,0,0,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,5.564214628977,3.47963966309705,2.14524699793529,0.574265537996172,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0,0.290033387828457,0.0852266274161009,0.178064071293475,0.165284915360978,0.384380134730212,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0,0,0,0.329294892959902,0.379473173765715,1.04980416073495,0,0,0,4.89547764039252,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,82.7732675526488,0,0,0,0,4.94221445459349,0,2.8725805519855,13.7587828770524,0.973865820823666,0.280797178113459,0.456469358066384,0,0,2.53937666702405,16.7011598107848,4.84319297258514,46.8430861459359,0,11.9823898080299,17.223060307716,16.6849141711909,2.9308214310306,0,4.92349595790849,3.2454681417118,0,1.4098700508785,3.7428108081644,0,2.6699314784893,0,1.98895302764489,0,0.890894042497916,0.307160702099232,0,0.422008249231538,0.779160935160341,2.63686198762815,4.01138275443188,0,0.828851746593443,61.4715904764434,0,0,0,0.629078458031288,15.9328845461292,8.18515792362995,0.0986434056369336,0,0,3.87733098438087,0.834912883456661,1.99613798001194,13.5422435764321,9.35821999959294,0,1.0241410345695,0.254253650292766,1.18193840883968,28.2689566058001,3.2076507472158,14.4108745794633,56.6874486920857,30.149109656352,1.52581736317083,3.87027409759286,0.591095237907095,0.87754158861589,1.52513848926586,1.81250867562184,0.0769502585037971,21.3071644433892,4.15015027898508,2.96200226552248,2.06430006651815,0,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,3.60953056987489,2.94093801476609,4.19553967439607,3.41556718903533,0.635746315921515,3.58696709697646,1.63232808159148,0.282706142867882,1.73110911793673,0.995261931078505,20.6990700937814,0,83.915479416616,60.9170219006259,64.6371867438769,0.404406797884062,0,7.73072670893619,0,0.782658475728359,1.94224303627274,0,9.67925728389311,1.83643656978294,0.063186579628488,7.36584755131013,5.59916233545135,3.98792323624311,1.323967823502,2.19753042885058,4.77889719091835,14.2304773014896,0.970722711091971,1.73559738335131,0.587954384486266,1.82824333818845,0,1.20390222730132,18.2869466136371,25.9467075655959,18.6402087510785,0.0969890164884194,2.47117154736201,1.80784592624426,1.09633539717401,0.794858446811959,2.089256266544,1.95551382734803,9.53889960993251,61.4744624849335,4.19600180122473,3.60226042885265,1.83258553865465,86.998663916016,2.3048767678104,0.621262677827163,0.471388069233591,1.49494626680975,1.04602846312333,2.3459590056354,2.02265412931063,13.2092463516154,6.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| ||
|short_description=p1@ONECUT2 | |short_description=p1@ONECUT2 | ||
}} | }} |
Latest revision as of 22:33, 19 September 2015
Short description: | p1@ONECUT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ONECUT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -293bp_to_ENST00000262095, ENST00000491143, NM_004852, uc002lgo.2_5end |
EntrezGene: | ONECUT2 |
HGNC: | 8139 |
UniProt: | O95948 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.78e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.14e-16 | 223 |
nervous system | 1.25e-14 | 89 |
central nervous system | 3.53e-13 | 81 |
brain | 2.71e-12 | 68 |
future brain | 2.71e-12 | 68 |
regional part of forebrain | 7.92e-12 | 41 |
forebrain | 7.92e-12 | 41 |
anterior neural tube | 7.92e-12 | 41 |
future forebrain | 7.92e-12 | 41 |
regional part of nervous system | 2.45e-10 | 53 |
regional part of brain | 2.45e-10 | 53 |
larynx | 1.07e-09 | 9 |
brain grey matter | 1.15e-09 | 34 |
gray matter | 1.15e-09 | 34 |
cerebral hemisphere | 1.21e-09 | 32 |
neural tube | 2.67e-09 | 56 |
neural rod | 2.67e-09 | 56 |
future spinal cord | 2.67e-09 | 56 |
neural keel | 2.67e-09 | 56 |
telencephalon | 1.03e-08 | 34 |
regional part of telencephalon | 1.10e-08 | 32 |
epithelium of foregut-midgut junction | 2.42e-08 | 25 |
anatomical boundary | 2.42e-08 | 25 |
hepatobiliary system | 2.42e-08 | 25 |
foregut-midgut junction | 2.42e-08 | 25 |
septum transversum | 2.42e-08 | 25 |
pre-chordal neural plate | 8.31e-08 | 61 |
neural nucleus | 2.12e-07 | 9 |
nucleus of brain | 2.12e-07 | 9 |
neocortex | 3.95e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.79e-39 | 235 |
disease of cellular proliferation | 2.28e-37 | 239 |
cell type cancer | 6.25e-36 | 143 |
carcinoma | 1.70e-30 | 106 |
organ system cancer | 1.64e-18 | 137 |
adenocarcinoma | 6.31e-10 | 25 |
gastrointestinal system cancer | 2.20e-08 | 14 |