FFCP PHASE1:Hg19::chr19:55085234..55085241,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:55085234..55085241,+
|short_description=p3@LILRA2
|description=CAGE_peak_3_at_LILRA2_5end
|association_with_transcript=-15bp_to_ENST00000391738,NM_0011309...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11027 | |EntrezGene=11027 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6603 | |HGNC=6603 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N149 | |UniProt=Q8N149 | ||
|association_with_transcript=-15bp_to_ENST00000391738,NM_001130917,NM_006866,uc002qgf.2,uc002qgg.3_5end | |||
|cluster_id=chr19:55085234..55085241,+ | |||
|description=CAGE_peak_3_at_LILRA2_5end | |||
|id=chr19:55085234..55085241,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.68e-75!76;CL:0000763!7.13e-69!112;CL:0000049!7.13e-69!112;CL:0002194!9.16e-67!63;CL:0000576!9.16e-67!63;CL:0000040!9.16e-67!63;CL:0000559!9.16e-67!63;CL:0002009!3.77e-64!65;CL:0000839!1.08e-62!70;CL:0000557!1.52e-61!71;CL:0002057!7.87e-56!42;CL:0002032!2.12e-51!165;CL:0000837!2.12e-51!165;CL:0000860!3.92e-51!45;CL:0000037!3.99e-51!172;CL:0000566!3.99e-51!172;CL:0000988!7.46e-47!182;CL:0000738!2.45e-46!140;CL:0002087!7.04e-42!119;CL:0002031!3.35e-39!124;CL:0002393!3.61e-14!9;CL:0002397!3.61e-14!9;CL:0000134!1.42e-11!358;CL:0002320!6.38e-11!365;CL:0000094!6.91e-11!8;CL:0000219!1.13e-08!390;CL:0000081!1.76e-07!11;CL:0000048!2.64e-07!430;CL:0000723!6.42e-07!436;CL:0000034!8.22e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.21e-47;39!CL:0000234;1.21e-47;39!CL:0000860;5.86e-44;33!CL:0002057;5.86e-44;33!CL:0000576;7.62e-42;48!CL:0000766;9.48e-37;69!CL:0000763;1.18e-20;100!CL:0000094;1.00e-18;8!CL:0000235;1.77e-13;6!CL:0000081;2.69e-13;11!CL:0002393;5.81e-12;6!CL:0002397;5.81e-12;6!CL:0000738;3.28e-11;136!CL:0000775;8.12e-11;3!CL:0000875;1.70e-09;3!CL:0002396;1.70e-09;3!CL:0002087;2.21e-09;104!CL:0000988;7.65e-09;177!CL:0000771;9.73e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.72e-86,72;CL:0000473,1.29e-78,48;CL:0000234,1.29e-78,48;CL:0002194,2.73e-75,59;CL:0000576,2.73e-75,59;CL:0000040,2.73e-75,59;CL:0000559,2.73e-75,59;CL:0002009,1.68e-72,61;CL:0000763,1.51e-69,108;CL:0000049,1.51e-69,108;CL:0000839,2.97e-66,66;CL:0000860,3.80e-66,42;CL:0002057,3.80e-66,42;CL:0000557,4.09e-65,67;CL:0002032,4.28e-46,161;CL:0000837,4.28e-46,161;CL:0000738,1.16e-43,136;CL:0000037,1.27e-43,168;CL:0000988,9.91e-41,177;CL:0002087,2.52e-37,115;CL:0002031,2.60e-35,120;CL:0002393,7.11e-20,9;CL:0002397,7.11e-20,9;CL:0000094,7.58e-19,8;CL:0000134,1.08e-13,354;CL:0000235,1.42e-13,6;CL:0000081,2.21e-13,11;CL:0002320,3.58e-13,361;CL:0000219,2.44e-11,386;CL:0000775,8.17e-11,3;CL:0000048,8.38e-10,427;CL:0000875,1.43e-09,3;CL:0002396,1.43e-09,3;CL:0000723,1.75e-09,433;CL:0000034,4.51e-09,441;CL:0000771,9.77e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-49;42!CL:0000049;2.66e-22;108 | |||
|ontology_enrichment_disease=DOID:8692!9.76e-09!31;DOID:1240!4.24e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.63e-66!102;UBERON:0003061!4.63e-66!102;UBERON:0002193!4.21e-58!112;UBERON:0002371!1.66e-52!80;UBERON:0001474!1.55e-47!86;UBERON:0002405!8.73e-38!115;UBERON:0004765!1.03e-37!101;UBERON:0001434!1.03e-37!101;UBERON:0003081!8.73e-23!216;UBERON:0002204!1.83e-17!167;UBERON:0002384!1.71e-10!375;UBERON:0000178!1.14e-09!15;UBERON:0000179!1.14e-09!15;UBERON:0000463!1.14e-09!15;UBERON:0007023!1.86e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.05e-11;15!UBERON:0000179;1.05e-11;15!UBERON:0000463;1.05e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.46e-68,98;UBERON:0003061,6.46e-68,98;UBERON:0002193,1.69e-60,108;UBERON:0002371,3.39e-56,76;UBERON:0001474,2.50e-51,82;UBERON:0002405,9.40e-49,93;UBERON:0004765,7.75e-46,90;UBERON:0001434,3.35e-40,100;UBERON:0003081,2.44e-26,203;UBERON:0002204,7.76e-20,167;UBERON:0000926,1.47e-12,315;UBERON:0004120,1.47e-12,315;UBERON:0006603,1.47e-12,315;UBERON:0002384,1.84e-12,371;UBERON:0000178,7.28e-12,15;UBERON:0000179,7.28e-12,15;UBERON:0000463,7.28e-12,15 | |||
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| ||
|short_description=p3@LILRA2 | |||
}} | }} |
Latest revision as of 22:53, 19 September 2015
Short description: | p3@LILRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LILRA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000391738, NM_001130917, NM_006866, uc002qgf.2, uc002qgg.3_5end |
EntrezGene: | LILRA2 |
HGNC: | 6603 |
UniProt: | Q8N149 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.46e-68 | 98 |
blood island | 6.46e-68 | 98 |
hemolymphoid system | 1.69e-60 | 108 |
bone marrow | 3.39e-56 | 76 |
bone element | 2.50e-51 | 82 |
immune system | 9.40e-49 | 93 |
skeletal element | 7.75e-46 | 90 |
skeletal system | 3.35e-40 | 100 |
lateral plate mesoderm | 2.44e-26 | 203 |
musculoskeletal system | 7.76e-20 | 167 |
mesoderm | 1.47e-12 | 315 |
mesoderm-derived structure | 1.47e-12 | 315 |
presumptive mesoderm | 1.47e-12 | 315 |
connective tissue | 1.84e-12 | 371 |
blood | 7.28e-12 | 15 |
haemolymphatic fluid | 7.28e-12 | 15 |
organism substance | 7.28e-12 | 15 |