FFCP PHASE1:Hg19::chr1:205198878..205198884,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9911 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24239 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=18bp_to_ENST00000495538_5end | |||
|cluster_id=chr1:205198878..205198884,+ | |||
|description=CAGE_peak_8_at_TMCC2_5end | |||
|id=chr1:205198878..205198884,+ | |||
|ontology_enrichment_celltype=CL:0000764!2.12e-07!2;CL:0000765!2.12e-07!2;CL:0000050!2.12e-07!2;CL:0000038!2.12e-07!2;CL:0000558!2.12e-07!2;CL:0000547!2.12e-07!2;CL:0000549!2.12e-07!2;CL:0000550!2.12e-07!2;CL:0000552!2.12e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.45e-40;2!CL:0000558;2.45e-40;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.49e-40,2;CL:0000765,5.49e-40,2;CL:0000050,5.49e-40,2;CL:0000038,5.49e-40,2;CL:0000558,5.49e-40,2;CL:0000547,5.49e-40,2;CL:0000549,5.49e-40,2;CL:0000550,5.49e-40,2;CL:0000552,5.49e-40,2 | |||
|ontology_enrichment_development_v019=UBERON:0006238;3.62e-08;10!UBERON:0006215;6.34e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.59e-56!115;UBERON:0001049!1.92e-46!57;UBERON:0005068!1.92e-46!57;UBERON:0006241!1.92e-46!57;UBERON:0007135!1.92e-46!57;UBERON:0002616!9.21e-39!59;UBERON:0001893!4.10e-38!34;UBERON:0001017!4.34e-38!82;UBERON:0005743!5.18e-38!86;UBERON:0002020!9.48e-38!34;UBERON:0003528!9.48e-38!34;UBERON:0002780!4.49e-37!41;UBERON:0001890!4.49e-37!41;UBERON:0006240!4.49e-37!41;UBERON:0000955!1.73e-36!69;UBERON:0006238!1.73e-36!69;UBERON:0003080!4.81e-36!42;UBERON:0003075!6.19e-36!86;UBERON:0007284!6.19e-36!86;UBERON:0002791!7.51e-36!33;UBERON:0002346!6.64e-34!90;UBERON:0000073!1.66e-33!94;UBERON:0001016!1.66e-33!94;UBERON:0001869!3.83e-33!32;UBERON:0003056!8.44e-25!61;UBERON:0002308!1.49e-24!9;UBERON:0000125!1.49e-24!9;UBERON:0002619!1.73e-21!22;UBERON:0000153!1.57e-20!129;UBERON:0007811!1.57e-20!129;UBERON:0001950!2.60e-20!20;UBERON:0002420!1.19e-19!9;UBERON:0007245!1.19e-19!9;UBERON:0010009!1.19e-19!9;UBERON:0010011!1.19e-19!9;UBERON:0000454!1.19e-19!9;UBERON:0009663!1.20e-19!7;UBERON:0000033!2.70e-19!123;UBERON:0000956!1.35e-18!25;UBERON:0000203!1.35e-18!25;UBERON:0004121!9.53e-18!169;UBERON:0000924!4.21e-17!173;UBERON:0006601!4.21e-17!173;UBERON:0002298!8.44e-13!8;UBERON:0003076!2.80e-11!15;UBERON:0003057!2.80e-11!15;UBERON:0000369!4.15e-11!4;UBERON:0002435!4.15e-11!4;UBERON:0000204!4.15e-11!4;UBERON:0010082!4.15e-11!4;UBERON:0000025!1.38e-10!194;UBERON:0006331!1.61e-09!3;UBERON:0000988!2.47e-09!3;UBERON:0001871!5.23e-09!7;UBERON:0005383!7.99e-09!3;UBERON:0005382!7.99e-09!3;UBERON:0004733!2.91e-08!12;UBERON:0002028!2.91e-08!12;UBERON:0007277!2.91e-08!12;UBERON:0000483!5.42e-08!309;UBERON:0000200!6.14e-08!6;UBERON:0000119!8.14e-08!312;UBERON:0004732!1.44e-07!13;UBERON:0004111!1.95e-07!241;UBERON:0001875!2.32e-07!2;UBERON:0006514!2.32e-07!2;UBERON:0000477!6.08e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;1.53e-21;1!UBERON:0011215;1.53e-21;1!UBERON:0001018;1.53e-21;1!UBERON:0002473;1.53e-21;1!UBERON:0005340;1.53e-21;1!UBERON:0003544;1.53e-21;1!UBERON:0005970;1.53e-21;1!UBERON:0002316;1.53e-21;1!UBERON:0001020;1.53e-21;1!UBERON:0002437;1.53e-21;1!UBERON:0002038;4.22e-21;1!UBERON:0009661;4.22e-21;1!UBERON:0002950;4.22e-21;1!UBERON:0001891;4.22e-21;1!UBERON:0009663;2.66e-12;7!UBERON:0005162;1.82e-11;2!UBERON:0000122;1.82e-11;2!UBERON:0001897;3.02e-11;2!UBERON:0001875;3.02e-11;2!UBERON:0006514;3.02e-11;2!UBERON:0010225;3.02e-11;2!UBERON:0002420;8.83e-10;9!UBERON:0000125;8.83e-10;9!UBERON:0007245;8.83e-10;9!UBERON:0002308;8.83e-10;9!UBERON:0010009;8.83e-10;9!UBERON:0010011;8.83e-10;9!UBERON:0000454;8.83e-10;9!UBERON:0007023;5.35e-09;114!UBERON:0001017;1.00e-08;75!UBERON:0000955;4.28e-08;68!UBERON:0001016;1.21e-07;83!UBERON:0000073;2.26e-07;53!UBERON:0002616;2.26e-07;53!UBERON:0002780;3.60e-07;41!UBERON:0001890;3.60e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,1.53e-21,1;UBERON:0011215,1.53e-21,1;UBERON:0001018,1.53e-21,1;UBERON:0002473,1.53e-21,1;UBERON:0005340,1.53e-21,1;UBERON:0003544,1.53e-21,1;UBERON:0005970,1.53e-21,1;UBERON:0002316,1.53e-21,1;UBERON:0001020,1.53e-21,1;UBERON:0002437,1.53e-21,1;UBERON:0002038,2.30e-21,1;UBERON:0009661,2.30e-21,1;UBERON:0002950,2.30e-21,1;UBERON:0001891,2.30e-21,1;UBERON:0009616,2.30e-21,1;UBERON:0010286,2.30e-21,1;UBERON:0007023,5.86e-17,114;UBERON:0000955,9.72e-14,68;UBERON:0006238,9.72e-14,68;UBERON:0009663,2.51e-12,7;UBERON:0001017,1.50e-11,81;UBERON:0005162,1.82e-11,2;UBERON:0000122,1.82e-11,2;UBERON:0001897,2.47e-11,2;UBERON:0010225,2.47e-11,2;UBERON:0001875,3.70e-11,2;UBERON:0006514,3.70e-11,2;UBERON:0001016,2.14e-10,89;UBERON:0002420,8.46e-10,9;UBERON:0000125,8.46e-10,9;UBERON:0007245,8.46e-10,9;UBERON:0002308,8.46e-10,9;UBERON:0010009,8.46e-10,9;UBERON:0010011,8.46e-10,9;UBERON:0000454,8.46e-10,9;UBERON:0000073,2.27e-09,53;UBERON:0002616,2.27e-09,53;UBERON:0001049,7.01e-09,56;UBERON:0005068,7.01e-09,56;UBERON:0006241,7.01e-09,56;UBERON:0007135,7.01e-09,56;UBERON:0002780,5.69e-08,41;UBERON:0001890,5.69e-08,41;UBERON:0003080,5.69e-08,41;UBERON:0006240,5.69e-08,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,1.3071772551245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0,0,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,1.93866549219044,1.20598527610407,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,1.3269511191747,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3590396543237,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.958337652243951,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0.953423842781029,0,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0.496771223531068,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.638535436228605,0.205116364240755,0,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0.206686796501184,0.443910671357348,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0.747667062745149,0.394636641377094,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821302454849976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.594092800654172,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,1.72007499781742,0,0.679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44806194206653,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p8@TMCC2 | |||
}} |
Latest revision as of 02:30, 20 September 2015
Short description: | p8@TMCC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TMCC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000495538_5end |
EntrezGene: | TMCC2 |
HGNC: | 24239 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.49e-40 | 2 |
erythroblast | 5.49e-40 | 2 |
megakaryocyte-erythroid progenitor cell | 5.49e-40 | 2 |
erythroid progenitor cell | 5.49e-40 | 2 |
reticulocyte | 5.49e-40 | 2 |
proerythroblast | 5.49e-40 | 2 |
basophilic erythroblast | 5.49e-40 | 2 |
polychromatophilic erythroblast | 5.49e-40 | 2 |
orthochromatic erythroblast | 5.49e-40 | 2 |