FFCP PHASE1:Hg19::chrX:153775426..153775466,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:153775426..153775466,-
|short_description=p3@G6PD
|description=CAGE_peak_3_at_G6PD_5end
|association_with_transcript=2bp_to_ENST00000393562_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2539 | |EntrezGene=2539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4057 | |HGNC=4057 | ||
|TSSclassifier=strong | |||
|UniProt=P11413 | |UniProt=P11413 | ||
|association_with_transcript=2bp_to_ENST00000393562_5end | |||
|cluster_id=chrX:153775426..153775466,- | |||
|description=CAGE_peak_3_at_G6PD_5end | |||
|id=chrX:153775426..153775466,- | |||
|ontology_enrichment_celltype=CL:0000037!1.49e-12!172;CL:0000566!1.49e-12!172;CL:0000988!3.94e-12!182;CL:0002032!7.37e-11!165;CL:0000837!7.37e-11!165;CL:0000738!1.77e-10!140;CL:0002087!4.80e-09!119;CL:0000838!1.22e-08!52;CL:0000542!1.33e-08!53;CL:0000051!1.33e-08!53;CL:0002031!3.74e-08!124 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.34e-11,168;CL:0000738,1.87e-10,136;CL:0000988,2.50e-10,177;CL:0002032,1.80e-09,161;CL:0000837,1.80e-09,161;CL:0002087,2.27e-08,115;CL:0002031,8.17e-08,120;CL:0000838,1.74e-07,52;CL:0002393,2.37e-07,9;CL:0002397,2.37e-07,9;CL:0000542,3.91e-07,53;CL:0000051,3.91e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.74e-18!94;UBERON:0001016!6.74e-18!94;UBERON:0001017!8.52e-16!82;UBERON:0005743!1.04e-15!86;UBERON:0001049!4.87e-14!57;UBERON:0005068!4.87e-14!57;UBERON:0006241!4.87e-14!57;UBERON:0007135!4.87e-14!57;UBERON:0000955!1.85e-13!69;UBERON:0006238!1.85e-13!69;UBERON:0007023!6.51e-13!115;UBERON:0002346!9.05e-13!90;UBERON:0003075!3.22e-12!86;UBERON:0007284!3.22e-12!86;UBERON:0002780!3.24e-12!41;UBERON:0001890!3.24e-12!41;UBERON:0006240!3.24e-12!41;UBERON:0003080!6.27e-12!42;UBERON:0002616!7.56e-12!59;UBERON:0003056!1.02e-10!61;UBERON:0001893!7.70e-10!34;UBERON:0002020!1.18e-09!34;UBERON:0003528!1.18e-09!34;UBERON:0002791!2.71e-09!33;UBERON:0001869!3.54e-09!32;UBERON:0001950!9.84e-08!20;UBERON:0002619!3.45e-07!22;UBERON:0000924!5.66e-07!173;UBERON:0006601!5.66e-07!173;UBERON:0000956!6.04e-07!25;UBERON:0000203!6.04e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.48e-10;53!UBERON:0002616;3.48e-10;53!UBERON:0002780;3.50e-10;41!UBERON:0001890;3.50e-10;41!UBERON:0001893;1.16e-09;34!UBERON:0001950;3.92e-09;20!UBERON:0001869;6.50e-09;32!UBERON:0002619;6.74e-09;22!UBERON:0003528;8.52e-09;34!UBERON:0002020;8.52e-09;34!UBERON:0002791;1.12e-08;32!UBERON:0000956;9.19e-08;25!UBERON:0000203;9.19e-08;25!UBERON:0000955;1.40e-07;68!UBERON:0001016;6.68e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.29e-18,89;UBERON:0000073,1.71e-16,53;UBERON:0002616,1.71e-16,53;UBERON:0001049,2.06e-16,56;UBERON:0005068,2.06e-16,56;UBERON:0006241,2.06e-16,56;UBERON:0007135,2.06e-16,56;UBERON:0001017,6.15e-16,81;UBERON:0000955,1.15e-14,68;UBERON:0006238,1.15e-14,68;UBERON:0002780,4.23e-14,41;UBERON:0001890,4.23e-14,41;UBERON:0003080,4.23e-14,41;UBERON:0006240,4.23e-14,41;UBERON:0002346,8.88e-14,86;UBERON:0007023,2.98e-13,114;UBERON:0003075,3.71e-13,82;UBERON:0007284,3.71e-13,82;UBERON:0003056,3.38e-12,61;UBERON:0001893,4.05e-11,34;UBERON:0003528,6.79e-11,34;UBERON:0002020,6.79e-11,34;UBERON:0001869,2.73e-10,32;UBERON:0002791,8.98e-10,32;UBERON:0010371,1.45e-09,104;UBERON:0001950,2.10e-09,20;UBERON:0002619,3.37e-09,22;UBERON:0000956,5.69e-08,25;UBERON:0000203,5.69e-08,25;UBERON:0004121,1.98e-07,171;UBERON:0000924,1.98e-07,171;UBERON:0006601,1.98e-07,171 | |||
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| ||
|short_description=p3@G6PD | |||
}} | }} |
Latest revision as of 04:06, 20 September 2015
Short description: | p3@G6PD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_G6PD_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000393562_5end |
EntrezGene: | G6PD |
HGNC: | 4057 |
UniProt: | P11413 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.34e-11 | 168 |
leukocyte | 1.87e-10 | 136 |
hematopoietic cell | 2.50e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.80e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-09 | 161 |
nongranular leukocyte | 2.27e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 8.17e-08 | 120 |
lymphoid lineage restricted progenitor cell | 1.74e-07 | 52 |
intermediate monocyte | 2.37e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.37e-07 | 9 |
lymphocyte | 3.91e-07 | 53 |
common lymphoid progenitor | 3.91e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.29e-18 | 89 |
regional part of nervous system | 1.71e-16 | 53 |
regional part of brain | 1.71e-16 | 53 |
neural tube | 2.06e-16 | 56 |
neural rod | 2.06e-16 | 56 |
future spinal cord | 2.06e-16 | 56 |
neural keel | 2.06e-16 | 56 |
central nervous system | 6.15e-16 | 81 |
brain | 1.15e-14 | 68 |
future brain | 1.15e-14 | 68 |
regional part of forebrain | 4.23e-14 | 41 |
forebrain | 4.23e-14 | 41 |
anterior neural tube | 4.23e-14 | 41 |
future forebrain | 4.23e-14 | 41 |
neurectoderm | 8.88e-14 | 86 |
adult organism | 2.98e-13 | 114 |
neural plate | 3.71e-13 | 82 |
presumptive neural plate | 3.71e-13 | 82 |
pre-chordal neural plate | 3.38e-12 | 61 |
telencephalon | 4.05e-11 | 34 |
brain grey matter | 6.79e-11 | 34 |
gray matter | 6.79e-11 | 34 |
cerebral hemisphere | 2.73e-10 | 32 |
regional part of telencephalon | 8.98e-10 | 32 |
ecto-epithelium | 1.45e-09 | 104 |
neocortex | 2.10e-09 | 20 |
regional part of cerebral cortex | 3.37e-09 | 22 |
cerebral cortex | 5.69e-08 | 25 |
pallium | 5.69e-08 | 25 |
ectoderm-derived structure | 1.98e-07 | 171 |
ectoderm | 1.98e-07 | 171 |
presumptive ectoderm | 1.98e-07 | 171 |