FFCP PHASE1:Hg19::chr12:6937564..6937585,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10536 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19318 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IVL6 | |||
|association_with_transcript=0bp_to_ENST00000251761,ENST00000396725,NM_014262,uc001qra.1_5end | |||
|cluster_id=chr12:6937564..6937585,+ | |||
|coexpression_cluster_id=C750 | |||
|description=CAGE_peak_1_at_LEPREL2_5end | |||
|id=chr12:6937564..6937585,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.76e-47!180;CL:0000183!1.75e-23!59;CL:0000680!2.29e-22!57;CL:0000056!2.29e-22!57;CL:0000355!2.29e-22!57;CL:0000187!7.81e-22!54;CL:0000222!6.77e-21!119;CL:0000393!1.10e-20!60;CL:0000211!1.10e-20!60;CL:0000057!1.04e-19!75;CL:0000192!2.99e-19!42;CL:0000514!2.99e-19!42;CL:0002321!1.03e-16!248;CL:0000220!1.45e-16!246;CL:0000359!1.26e-14!32;CL:0000144!1.87e-10!625;CL:0002371!4.39e-10!591;CL:0002494!9.06e-07!16;CL:0002620!9.48e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.09e-14;32!CL:0000192;5.34e-14;43!CL:0000187;2.47e-12;55!CL:0000393;7.98e-11;61!CL:0000211;7.98e-11;61!CL:0000134;4.73e-10;55!CL:0000723;2.08e-09;61!CL:0000048;4.19e-09;58!CL:0000057;2.25e-08;73!CL:0000034;5.96e-08;69!CL:0002320;8.04e-08;188!CL:0002494;7.87e-07;16!CL:0002620;8.20e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.27e-23,58;CL:0000056,6.27e-23,58;CL:0000355,6.27e-23,58;CL:0000187,2.19e-22,55;CL:0000222,2.14e-21,121;CL:0000393,3.15e-21,61;CL:0000211,3.15e-21,61;CL:0000057,1.78e-20,76;CL:0000192,9.46e-20,43;CL:0000514,9.46e-20,43;CL:0002321,9.09e-17,250;CL:0000359,8.26e-15,32;CL:0002494,7.65e-07,16;CL:0002620,8.01e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;5.34e-14;43!CL:0000355;5.56e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.61e-23!79;UBERON:0007798!2.61e-23!79;UBERON:0000914!6.98e-23!83;UBERON:0002329!6.98e-23!83;UBERON:0003077!6.98e-23!83;UBERON:0003059!6.98e-23!83;UBERON:0007282!6.98e-23!83;UBERON:0009618!6.98e-23!83;UBERON:0007285!6.98e-23!83;UBERON:0004290!2.04e-21!70;UBERON:0004872!3.73e-21!84;UBERON:0000486!4.39e-21!82;UBERON:0001134!1.70e-20!61;UBERON:0002036!1.70e-20!61;UBERON:0003082!1.70e-20!61;UBERON:0002385!6.35e-20!63;UBERON:0001015!6.35e-20!63;UBERON:0000383!6.35e-20!63;UBERON:0005256!7.48e-20!143;UBERON:0000055!6.68e-19!69;UBERON:0001981!8.60e-19!60;UBERON:0007500!8.60e-19!60;UBERON:0004537!8.60e-19!60;UBERON:0006965!8.60e-19!60;UBERON:0003914!4.93e-18!118;UBERON:0000490!1.04e-17!138;UBERON:0001637!1.95e-17!42;UBERON:0003509!1.95e-17!42;UBERON:0004572!1.95e-17!42;UBERON:0000119!4.97e-17!312;UBERON:0000483!1.09e-16!309;UBERON:0004535!2.39e-16!110;UBERON:0000475!5.87e-16!365;UBERON:0001009!1.01e-15!113;UBERON:0004573!6.05e-14!33;UBERON:0004571!6.05e-14!33;UBERON:0002100!7.80e-13!216;UBERON:0000481!1.65e-12!347;UBERON:0000468!2.22e-12!659;UBERON:0000477!1.63e-11!286;UBERON:0004111!1.63e-10!241;UBERON:0003104!5.93e-09!238;UBERON:0009142!5.93e-09!238;UBERON:0000947!8.91e-09!21;UBERON:0010191!8.91e-09!21;UBERON:0000025!9.53e-09!194;UBERON:0000467!1.34e-08!625;UBERON:0000480!1.58e-08!626;UBERON:0000922!1.83e-07!612;UBERON:0003102!3.10e-07!95;UBERON:0002050!6.99e-07!605;UBERON:0005423!6.99e-07!605;UBERON:0000923!8.47e-07!604;UBERON:0005291!8.47e-07!604;UBERON:0006598!8.47e-07!604;UBERON:0002532!8.47e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.00e-13;33!UBERON:0004571;4.00e-13;33!UBERON:0001637;4.59e-13;42!UBERON:0003509;4.59e-13;42!UBERON:0004572;4.59e-13;42!UBERON:0007500;8.97e-11;56!UBERON:0001981;8.97e-11;56!UBERON:0004537;8.97e-11;56!UBERON:0002049;8.30e-10;75!UBERON:0007798;8.30e-10;75!UBERON:0000055;1.55e-09;65!UBERON:0003914;2.63e-09;74!UBERON:0000947;6.86e-09;21!UBERON:0010191;6.86e-09;21!UBERON:0002384;2.27e-07;198!UBERON:0002385;3.97e-07;31!UBERON:0001015;3.97e-07;31!UBERON:0000383;3.97e-07;31!UBERON:0002204;7.57e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.02e-23,78;UBERON:0002049,3.60e-23,78;UBERON:0007798,3.60e-23,78;UBERON:0007524,2.55e-22,73;UBERON:0002329,4.54e-22,71;UBERON:0003059,4.54e-22,71;UBERON:0007282,4.54e-22,71;UBERON:0004290,4.54e-22,71;UBERON:0009618,4.54e-22,71;UBERON:0000486,9.96e-22,83;UBERON:0003077,9.99e-22,72;UBERON:0007285,9.99e-22,72;UBERON:0001134,3.93e-21,62;UBERON:0002036,3.93e-21,62;UBERON:0003082,3.93e-21,62;UBERON:0004872,4.44e-21,83;UBERON:0003104,9.98e-21,160;UBERON:0009142,9.98e-21,160;UBERON:0002385,1.50e-20,64;UBERON:0001015,1.50e-20,64;UBERON:0000383,1.50e-20,64;UBERON:0000490,1.89e-19,148;UBERON:0000055,1.03e-18,68;UBERON:0007500,1.34e-18,59;UBERON:0001981,1.34e-18,59;UBERON:0004537,1.34e-18,59;UBERON:0006965,1.34e-18,59;UBERON:0000119,5.67e-18,309;UBERON:0003914,6.53e-18,117;UBERON:0001637,1.17e-17,42;UBERON:0003509,1.17e-17,42;UBERON:0004572,1.17e-17,42;UBERON:0000483,1.27e-17,306;UBERON:0005256,4.36e-17,122;UBERON:0004535,5.68e-16,109;UBERON:0001009,2.37e-15,112;UBERON:0004573,4.06e-14,33;UBERON:0004571,4.06e-14,33;UBERON:0002100,2.60e-11,199;UBERON:0004111,2.10e-10,240;UBERON:0000947,7.07e-09,21;UBERON:0010191,7.07e-09,21;UBERON:0000025,1.97e-08,192;UBERON:0000926,1.39e-07,315;UBERON:0004120,1.39e-07,315;UBERON:0006603,1.39e-07,315;UBERON:0003102,3.94e-07,99 | |||
|phase1_expression=18.8945514441379,18.1985445307336,21.5660238266836,25.0183245882826,25.0298212879281,57.5743425906243,43.0609792886128,11.370957721683,10.9697963843932,20.8873846026283,25.8186432149798,14.8540133048517,39.8288137124965,42.2043263593759,55.011964370834,55.1306620090456,53.03711846611,71.5703888579626,46.3536158850982,23.0236378603593,35.9041216589885,52.6603932083188,14.3117993565528,16.561805433819,17.0737989848932,0,0,0,0,0,1.39334510984468,5.51652734687356,15.662707776469,13.6808983761711,0,0,4.11040615068786,0.553995408531877,0,0,0.223915474239924,0,0.257575567634187,0,0,0.242584061187816,0,0,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,2.24203425192614,1.58030450865046,0.393419540227666,0.393010762749165,0.205601498999509,0,1.62961133316795,1.89379122293893,1.94826728407911,0,0,0.221533894583621,0,0,0,0,0.276350017785848,0.289803085735052,1.33457906845854,2.40786745280742,0,0.113309342697566,0.383220493601921,0.68725489096526,0,0.95569624297229,1.30216690771284,0.950452044448374,0.451725357233318,0.383959833463255,0,1.18388626022008,0,0.403213486449465,1.33720097891754,0.289648807765598,26.8187552945358,45.6076584598473,26.8511379871414,32.8909628669955,33.5896400126046,42.5848765744822,15.905718941022,97.3269740605272,25.7134702686265,40.7982091331118,27.843627064721,7.66227591661619,13.4789256668241,8.52804218404188,0,0.696518949197069,0.664789802594326,0.238490624305342,0,0.371457501329565,27.8267370313387,45.5924335406246,40.6154386880885,33.3531685735166,51.1789312176085,37.1409356619091,22.7804513525124,9.04458657092651,8.18262404179434,16.0665894127042,18.5301485870208,25.8492515944294,20.5012128340462,18.0154909369476,74.5330592051219,20.0924388639179,15.0434679659534,14.0764350604153,29.1301611185178,25.6301728083395,36.457147042151,0,0,12.210633459991,43.2365597974927,34.5701296844303,34.8236145538765,143.705146995156,35.8215066020341,28.0338800071154,53.3744978648525,85.5936393007545,19.2950841947855,23.9784996284045,25.663518788813,30.7255578119211,54.1605369011199,12.1847144553574,27.1579266842379,19.9665137540557,18.0832903467679,18.7895197830024,16.025421492445,16.7136459975676,16.9447962141561,29.2345675202008,20.0452015480985,61.7761485786668,55.3877921583967,26.3946794962028,112.823048265149,20.368669788442,21.1450298583619,6.92660288710457,28.5335453572545,69.5727296463775,46.4235602021384,30.7401216363657,65.4772170264346,37.1589856544307,23.9483048310305,107.432612398216,27.4119727774247,62.0913701509966,50.6237849221924,44.8945043761768,21.0463931148189,44.6807780412083,37.0040592542043,28.4497060001109,129.578501268564,25.8932892445035,33.742557869787,1.93260853163297,3.00020732649918,2.58124135850103,13.5390813803851,14.3132149787204,15.8023762302545,13.3722760969828,18.6717429647965,8.75945661781992,17.2094485562798,48.2430703644664,15.1948413487729,24.1471322576629,41.1471304551664,0.709840800239063,0.674338760312407,0.241011029883482,0.992645754591546,0.653638332277218,0.71181185733329,0.943819157121151,0.588664395376038,0.769494313892781,14.0249536378683,65.9136336876195,38.2763830538202,92.6154881728914,0,0,4.13552934676983,0,8.48620225947483,38.6027573171682,3.73150970389327,3.37205259772859,5.2275065654048,9.62919829648708,10.7516740752407,39.517521840624,41.8560891873293,20.9834033004889,56.1213558447228,13.5704460895409,26.8531597294434,13.3177906564219,0.790204397959275,0,0,0.234004265139238,0.297262324577456,1.87467667973554,13.2705881277099,4.39502801451398,0.358234090811393,0.871901815541886,1.53353071666084,0,0.616339038092582,1.03664057770386,1.58531948758658,0.75745460055828,7.87373889222896,17.9534560012391,21.0991404978085,25.6608669034058,23.6503233217644,28.5325904951722,18.8645445536182,12.8950746997165,20.9260833039974,16.7944674529976,61.5333367007022,103.720369297046,44.801045885468,47.336984752107,48.8834953483421,41.9248020047292,38.2992656462851,45.0253482537208,44.7521120150002,99.2997537866341,59.2733042482154,39.0883421152482,52.5980084138968,44.349304884272,23.5122714106477,23.5314033822079,9.2974881799313,0,0,0,32.5889803468552,26.4182452418462,21.3955357561078,22.7306651468099,35.5474038012163,22.9198032947066,0,0,0,0.385029108839245,5.59008173289419,3.90419561572865,7.73288812777695,6.8681668787083,3.18969375826582,0,0,0.414415513436035,27.8509686202448,59.0201214850419,48.2851742185529,24.9565033836969,29.4407831515317,20.1859091243436,31.7453234630253,42.4334000616084,93.2370766629538,38.2850363782268,34.5397311238427,49.9640446748016,35.7960491608501,58.9361483962849,46.6675056382764,0.620304078368662,0.431428401637234,0.213455115606889,16.6720164295443,59.9167582237789,28.7270778663196,34.9832009024475,27.3162312452751,34.240531520835,43.0547541499155,22.0034117098682,38.926648916753,74.2090332224955,21.4351474385691,63.38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| |||
|short_description=p1@LEPREL2 | |||
}} |
Latest revision as of 04:39, 20 September 2015
Short description: | p1@LEPREL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LEPREL2_5end |
Coexpression cluster: | C750_Smooth_Mesenchymal_Fibroblast_Hepatic_Chondrocyte_Lens_tenocyte |
Association with transcript: | 0bp_to_ENST00000251761, ENST00000396725, NM_014262, uc001qra.1_5end |
EntrezGene: | LEPREL2 |
HGNC: | 19318 |
UniProt: | Q8IVL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.27e-23 | 58 |
myoblast | 6.27e-23 | 58 |
multi-potent skeletal muscle stem cell | 6.27e-23 | 58 |
muscle cell | 2.19e-22 | 55 |
mesodermal cell | 2.14e-21 | 121 |
electrically responsive cell | 3.15e-21 | 61 |
electrically active cell | 3.15e-21 | 61 |
fibroblast | 1.78e-20 | 76 |
smooth muscle cell | 9.46e-20 | 43 |
smooth muscle myoblast | 9.46e-20 | 43 |
embryonic cell | 9.09e-17 | 250 |
vascular associated smooth muscle cell | 8.26e-15 | 32 |
cardiocyte | 7.65e-07 | 16 |
skin fibroblast | 8.01e-07 | 23 |