FFCP PHASE1:Hg19::chr5:131705382..131705437,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6584 | |EntrezGene=6584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10969 | |HGNC=10969 | ||
|TSSclassifier=strong | |||
|UniProt=O76082 | |UniProt=O76082 | ||
|association_with_transcript=0bp_to_NM_003060,uc003kww.3,uc003kwx.3_5end | |association_with_transcript=0bp_to_NM_003060,uc003kww.3,uc003kwx.3_5end | ||
|cluster_id=chr5:131705382..131705437,+ | |||
|description=CAGE_peak_1_at_SLC22A5_5end | |description=CAGE_peak_1_at_SLC22A5_5end | ||
|id=chr5:131705382..131705437,+ | |id=chr5:131705382..131705437,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.46e-09!254 | |ontology_enrichment_celltype=CL:0000066!1.46e-09!254 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.45e-10,253 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.42e-07;31 | |ontology_enrichment_development_v019=UBERON:0003104;6.42e-07;31 | ||
|ontology_enrichment_disease=DOID:0050687!6.68e-09!143;DOID:305!3.18e-08!106 | |ontology_enrichment_disease=DOID:0050687!6.68e-09!143;DOID:305!3.18e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.31e-09,143;DOID:305,3.68e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.00e-16!115;UBERON:0004119!4.46e-09!169;UBERON:0000925!4.46e-09!169;UBERON:0006595!4.46e-09!169;UBERON:0000064!5.16e-09!219;UBERON:0000924!2.44e-08!173;UBERON:0006601!2.44e-08!173;UBERON:0002346!7.39e-08!90;UBERON:0004121!9.73e-08!169;UBERON:0001049!1.97e-07!57;UBERON:0005068!1.97e-07!57;UBERON:0006241!1.97e-07!57;UBERON:0007135!1.97e-07!57;UBERON:0003075!3.45e-07!86;UBERON:0007284!3.45e-07!86;UBERON:0000481!4.08e-07!347;UBERON:0000062!7.12e-07!511 | |ontology_enrichment_uberon=UBERON:0007023!5.00e-16!115;UBERON:0004119!4.46e-09!169;UBERON:0000925!4.46e-09!169;UBERON:0006595!4.46e-09!169;UBERON:0000064!5.16e-09!219;UBERON:0000924!2.44e-08!173;UBERON:0006601!2.44e-08!173;UBERON:0002346!7.39e-08!90;UBERON:0004121!9.73e-08!169;UBERON:0001049!1.97e-07!57;UBERON:0005068!1.97e-07!57;UBERON:0006241!1.97e-07!57;UBERON:0007135!1.97e-07!57;UBERON:0003075!3.45e-07!86;UBERON:0007284!3.45e-07!86;UBERON:0000481!4.08e-07!347;UBERON:0000062!7.12e-07!511 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.97e-16,114;UBERON:0004119,1.77e-09,160;UBERON:0000925,1.77e-09,160;UBERON:0006595,1.77e-09,160;UBERON:0011216,5.22e-09,223;UBERON:0001008,3.41e-08,48;UBERON:0006554,5.85e-08,47;UBERON:0004121,2.07e-07,171;UBERON:0000924,2.07e-07,171;UBERON:0006601,2.07e-07,171;UBERON:0010371,2.21e-07,104;UBERON:0001049,4.18e-07,56;UBERON:0005068,4.18e-07,56;UBERON:0006241,4.18e-07,56;UBERON:0007135,4.18e-07,56;UBERON:0000073,5.35e-07,53;UBERON:0002616,5.35e-07,53;UBERON:0002346,7.18e-07,86 | |||
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| ||
|short_description=p1@SLC22A5 | |short_description=p1@SLC22A5 | ||
}} | }} |
Latest revision as of 04:42, 20 September 2015
Short description: | p1@SLC22A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC22A5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_003060, uc003kww.3, uc003kwx.3_5end |
EntrezGene: | SLC22A5 |
HGNC: | 10969 |
UniProt: | O76082 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.45e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.97e-16 | 114 |
endoderm-derived structure | 1.77e-09 | 160 |
endoderm | 1.77e-09 | 160 |
presumptive endoderm | 1.77e-09 | 160 |
organ system subdivision | 5.22e-09 | 223 |
renal system | 3.41e-08 | 48 |
urinary system structure | 5.85e-08 | 47 |
ectoderm-derived structure | 2.07e-07 | 171 |
ectoderm | 2.07e-07 | 171 |
presumptive ectoderm | 2.07e-07 | 171 |
ecto-epithelium | 2.21e-07 | 104 |
neural tube | 4.18e-07 | 56 |
neural rod | 4.18e-07 | 56 |
future spinal cord | 4.18e-07 | 56 |
neural keel | 4.18e-07 | 56 |
regional part of nervous system | 5.35e-07 | 53 |
regional part of brain | 5.35e-07 | 53 |
neurectoderm | 7.18e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.31e-09 | 143 |
carcinoma | 3.68e-08 | 106 |