FFCP PHASE1:Hg19::chr17:39728303..39728318,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3857 | |EntrezGene=3857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6447 | |HGNC=6447 | ||
|TSSclassifier=strong | |||
|UniProt=P35527 | |UniProt=P35527 | ||
|association_with_transcript=0bp_to_ENST00000246662,NM_000226,uc002hxe.3_5end | |association_with_transcript=0bp_to_ENST00000246662,NM_000226,uc002hxe.3_5end | ||
|cluster_id=chr17:39728303..39728318,- | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_1_at_KRT9_5end | |description=CAGE_peak_1_at_KRT9_5end | ||
|id=chr17:39728303..39728318,- | |id=chr17:39728303..39728318,- | ||
|ontology_enrichment_celltype=CL:0000242!2.91e-07!2 | |ontology_enrichment_celltype=CL:0000242!2.91e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;2.37e-15;2!CL:0000242;2.37e-15;2!CL:0000312;6.39e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.37e-15,2;CL:0000312,6.39e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.16e-29;1!UBERON:0006965;2.37e-15;2!UBERON:0003056;1.09e-10;3 | |||
|ontology_enrichment_disease=DOID:3151!2.32e-13!1;DOID:3149!2.32e-13!1;DOID:3451!2.58e-07!2;DOID:4159!2.58e-07!2;DOID:0060122!2.58e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.78e-29;1!DOID:3149;1.78e-29;1!DOID:3451;1.78e-15;2!DOID:4159;1.78e-15;2!DOID:0060122;1.78e-15;2!DOID:4362;4.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.78e-29,1;DOID:3149,1.78e-29,1;DOID:3451,1.78e-15,2;DOID:4159,1.78e-15,2;DOID:0060122,1.78e-15,2;DOID:4362,4.79e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000941!2.62e-13!1;UBERON:0004904!2.62e-13!1;UBERON:0002464!2.62e-13!1;UBERON:0001021!2.62e-13!1;UBERON:0001785!2.62e-13!1;UBERON:0000989!4.77e-13!1;UBERON:0008811!4.77e-13!1;UBERON:0006258!4.77e-13!1;UBERON:0005876!4.77e-13!1;UBERON:0004874!4.77e-13!1;UBERON:0002370!4.78e-13!4;UBERON:0005058!4.78e-13!4;UBERON:0009113!4.78e-13!4;UBERON:0003295!4.78e-13!4;UBERON:0005562!4.78e-13!4;UBERON:0000974!2.55e-11!10;UBERON:0003351!5.35e-09!6;UBERON:0004177!7.81e-08!7;UBERON:0003714!2.74e-07!2;UBERON:0005162!2.74e-07!2;UBERON:0000122!2.74e-07!2;UBERON:0000341!4.17e-07!2 | |ontology_enrichment_uberon=UBERON:0000941!2.62e-13!1;UBERON:0004904!2.62e-13!1;UBERON:0002464!2.62e-13!1;UBERON:0001021!2.62e-13!1;UBERON:0001785!2.62e-13!1;UBERON:0000989!4.77e-13!1;UBERON:0008811!4.77e-13!1;UBERON:0006258!4.77e-13!1;UBERON:0005876!4.77e-13!1;UBERON:0004874!4.77e-13!1;UBERON:0002370!4.78e-13!4;UBERON:0005058!4.78e-13!4;UBERON:0009113!4.78e-13!4;UBERON:0003295!4.78e-13!4;UBERON:0005562!4.78e-13!4;UBERON:0000974!2.55e-11!10;UBERON:0003351!5.35e-09!6;UBERON:0004177!7.81e-08!7;UBERON:0003714!2.74e-07!2;UBERON:0005162!2.74e-07!2;UBERON:0000122!2.74e-07!2;UBERON:0000341!4.17e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.02e-57;2!UBERON:0005058;2.02e-57;2!UBERON:0009113;2.02e-57;2!UBERON:0000941;3.16e-29;1!UBERON:0001785;3.16e-29;1!UBERON:0002464;3.16e-29;1!UBERON:0004904;3.16e-29;1!UBERON:0001021;3.16e-29;1!UBERON:0004177;1.02e-23;5!UBERON:0005057;1.02e-23;5!UBERON:0003714;2.37e-15;2!UBERON:0005162;2.37e-15;2!UBERON:0000122;2.37e-15;2!UBERON:0000014;2.11e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.37e-29,1;UBERON:0001785,2.37e-29,1;UBERON:0002464,2.37e-29,1;UBERON:0004904,2.37e-29,1;UBERON:0001021,2.37e-29,1;UBERON:0003902,2.37e-29,1;UBERON:0005425,2.37e-29,1;UBERON:0002370,2.37e-29,4;UBERON:0005058,2.37e-29,4;UBERON:0009113,2.37e-29,4;UBERON:0003295,2.37e-29,4;UBERON:0005562,2.37e-29,4;UBERON:0003351,5.89e-20,6;UBERON:0004177,2.90e-17,7;UBERON:0005057,2.90e-17,7;UBERON:0003714,2.05e-15,2;UBERON:0005162,2.05e-15,2;UBERON:0000122,2.05e-15,2;UBERON:0000974,2.12e-12,10;UBERON:0003408,2.12e-12,10;UBERON:0001042,2.12e-12,10;UBERON:0009145,2.12e-12,10;UBERON:0006562,2.30e-11,11;UBERON:0009722,2.30e-11,11;UBERON:0007690,2.30e-11,11;UBERON:0000014,2.11e-08,4;UBERON:0001781,2.26e-08,4;UBERON:0008814,2.60e-07,18;UBERON:0001557,5.66e-07,19 | |||
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|short_description=p1@KRT9 | |short_description=p1@KRT9 | ||
}} | }} |
Latest revision as of 06:04, 20 September 2015
Short description: | p1@KRT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT9_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | 0bp_to_ENST00000246662, NM_000226, uc002hxe.3_5end |
EntrezGene: | KRT9 |
HGNC: | 6447 |
UniProt: | P35527 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.37e-15 | 2 |
keratinocyte | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.37e-29 | 1 |
cranial nerve | 2.37e-29 | 1 |
nerve trunk | 2.37e-29 | 1 |
nerve connecting eye with brain | 2.37e-29 | 1 |
nerve | 2.37e-29 | 1 |
retinal neural layer | 2.37e-29 | 1 |
presumptive neural retina | 2.37e-29 | 1 |
thymus | 2.37e-29 | 4 |
hemolymphoid system gland | 2.37e-29 | 4 |
thymic region | 2.37e-29 | 4 |
pharyngeal gland | 2.37e-29 | 4 |
thymus primordium | 2.37e-29 | 4 |
pharyngeal epithelium | 5.89e-20 | 6 |
hemopoietic organ | 2.90e-17 | 7 |
immune organ | 2.90e-17 | 7 |
neural tissue | 2.05e-15 | 2 |
multi cell component structure | 2.05e-15 | 2 |
neuron projection bundle | 2.05e-15 | 2 |
neck | 2.12e-12 | 10 |
gland of gut | 2.12e-12 | 10 |
chordate pharynx | 2.12e-12 | 10 |
pharyngeal region of foregut | 2.12e-12 | 10 |
pharynx | 2.30e-11 | 11 |
entire pharyngeal arch endoderm | 2.30e-11 | 11 |
early pharyngeal endoderm | 2.30e-11 | 11 |
zone of skin | 2.11e-08 | 4 |
layer of retina | 2.26e-08 | 4 |
pharyngeal arch system | 2.60e-07 | 18 |
upper respiratory tract | 5.66e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.78e-29 | 1 |
keratoacanthoma | 1.78e-29 | 1 |
skin carcinoma | 1.78e-15 | 2 |
skin cancer | 1.78e-15 | 2 |
integumentary system cancer | 1.78e-15 | 2 |
cervical cancer | 4.79e-07 | 5 |