FFCP PHASE1:Hg19::chr1:207669495..207669509,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1378 | |EntrezGene=1378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2334 | |HGNC=2334 | ||
|TSSclassifier=strong | |||
|UniProt=P17927,Q5SR44 | |UniProt=P17927,Q5SR44 | ||
|association_with_transcript=0bp_to_ENST00000367051,ENST00000367052,ENST00000367053_5end | |association_with_transcript=0bp_to_ENST00000367051,ENST00000367052,ENST00000367053_5end | ||
|cluster_id=chr1:207669495..207669509,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_CR1_5end | |description=CAGE_peak_2_at_CR1_5end | ||
|id=chr1:207669495..207669509,+ | |id=chr1:207669495..207669509,+ | ||
|ontology_enrichment_celltype=CL:0000766!3.37e-56!76;CL:0000738!3.01e-52!140;CL:0000037!6.85e-49!172;CL:0000566!6.85e-49!172;CL:0000839!1.89e-47!70;CL:0002194!2.45e-47!63;CL:0000576!2.45e-47!63;CL:0000040!2.45e-47!63;CL:0000559!2.45e-47!63;CL:0002087!1.26e-46!119;CL:0002057!1.28e-45!42;CL:0002032!1.30e-45!165;CL:0000837!1.30e-45!165;CL:0002009!2.67e-45!65;CL:0002031!1.67e-44!124;CL:0000988!1.87e-44!182;CL:0000557!4.48e-43!71;CL:0000763!8.74e-43!112;CL:0000049!8.74e-43!112;CL:0000860!1.58e-41!45;CL:0000236!4.02e-14!14;CL:0000094!5.75e-12!8;CL:0000134!6.78e-10!358;CL:0002393!7.34e-10!9;CL:0002397!7.34e-10!9;CL:0002320!3.14e-09!365;CL:0000945!5.35e-09!24;CL:0000826!5.35e-09!24;CL:0000081!4.35e-08!11;CL:0000219!5.73e-07!390 | |ontology_enrichment_celltype=CL:0000766!3.37e-56!76;CL:0000738!3.01e-52!140;CL:0000037!6.85e-49!172;CL:0000566!6.85e-49!172;CL:0000839!1.89e-47!70;CL:0002194!2.45e-47!63;CL:0000576!2.45e-47!63;CL:0000040!2.45e-47!63;CL:0000559!2.45e-47!63;CL:0002087!1.26e-46!119;CL:0002057!1.28e-45!42;CL:0002032!1.30e-45!165;CL:0000837!1.30e-45!165;CL:0002009!2.67e-45!65;CL:0002031!1.67e-44!124;CL:0000988!1.87e-44!182;CL:0000557!4.48e-43!71;CL:0000763!8.74e-43!112;CL:0000049!8.74e-43!112;CL:0000860!1.58e-41!45;CL:0000236!4.02e-14!14;CL:0000094!5.75e-12!8;CL:0000134!6.78e-10!358;CL:0002393!7.34e-10!9;CL:0002397!7.34e-10!9;CL:0002320!3.14e-09!365;CL:0000945!5.35e-09!24;CL:0000826!5.35e-09!24;CL:0000081!4.35e-08!11;CL:0000219!5.73e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.84e-52;39!CL:0000234;1.84e-52;39!CL:0000860;9.71e-52;33!CL:0002057;9.71e-52;33!CL:0000576;1.14e-36;48!CL:0000766;5.00e-31;69!CL:0000236;1.30e-21;13!CL:0000094;6.92e-19;8!CL:0000763;2.03e-18;100!CL:0000738;1.68e-16;136!CL:0002087;2.81e-15;104!CL:0000945;3.89e-14;24!CL:0000081;2.92e-13;11!CL:0000235;1.19e-12;6!CL:0000988;1.69e-10;177!CL:0000775;1.03e-08;3!CL:0000767;2.24e-07;3!CL:0002619;3.15e-07;3!CL:0000219;7.53e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.32e-80,72;CL:0002194,1.69e-69,59;CL:0000576,1.69e-69,59;CL:0000040,1.69e-69,59;CL:0000559,1.69e-69,59;CL:0000473,4.36e-67,48;CL:0000234,4.36e-67,48;CL:0002009,8.35e-67,61;CL:0000738,3.78e-65,136;CL:0000839,8.95e-61,66;CL:0000557,1.12e-59,67;CL:0002087,2.45e-59,115;CL:0000860,1.15e-55,42;CL:0002057,1.15e-55,42;CL:0000037,2.56e-54,168;CL:0000763,3.09e-54,108;CL:0000049,3.09e-54,108;CL:0002032,7.30e-54,161;CL:0000837,7.30e-54,161;CL:0002031,3.79e-52,120;CL:0000988,1.31e-50,177;CL:0000236,3.39e-23,14;CL:0000094,6.41e-19,8;CL:0000134,4.88e-16,354;CL:0002320,2.24e-15,361;CL:0000945,4.23e-14,24;CL:0000826,4.23e-14,24;CL:0000081,2.77e-13,11;CL:0000219,4.70e-13,386;CL:0000235,9.57e-13,6;CL:0000048,3.00e-10,427;CL:0000723,7.26e-10,433;CL:0000034,2.26e-09,441;CL:0000775,1.03e-08,3;CL:0000767,2.08e-07,3;CL:0002619,2.32e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.19e-41;42!CL:0000049;1.73e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.46e-50!102;UBERON:0003061!2.46e-50!102;UBERON:0002193!4.10e-47!112;UBERON:0002371!1.76e-37!80;UBERON:0001474!1.61e-33!86;UBERON:0002405!7.70e-31!115;UBERON:0004765!9.73e-26!101;UBERON:0001434!9.73e-26!101;UBERON:0003081!2.28e-15!216;UBERON:0007023!6.99e-13!115;UBERON:0000178!9.96e-12!15;UBERON:0000179!9.96e-12!15;UBERON:0000463!9.96e-12!15;UBERON:0002204!1.44e-11!167;UBERON:0002384!9.84e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.43e-16;15!UBERON:0000179;1.43e-16;15!UBERON:0000463;1.43e-16;15!UBERON:0002390;7.53e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.52e-67,98;UBERON:0003061,7.52e-67,98;UBERON:0002193,3.83e-64,108;UBERON:0002371,4.48e-51,76;UBERON:0002405,2.38e-48,93;UBERON:0001474,2.20e-46,82;UBERON:0004765,4.23e-41,90;UBERON:0001434,1.10e-35,100;UBERON:0003081,3.22e-26,203;UBERON:0000178,1.36e-16,15;UBERON:0000179,1.36e-16,15;UBERON:0000463,1.36e-16,15;UBERON:0002204,2.89e-16,167;UBERON:0002384,1.79e-14,371;UBERON:0000926,2.74e-11,315;UBERON:0004120,2.74e-11,315;UBERON:0006603,2.74e-11,315 | |||
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|short_description=p2@CR1 | |short_description=p2@CR1 | ||
}} | }} |
Latest revision as of 08:46, 20 September 2015
Short description: | p2@CR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CR1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000367051, ENST00000367052, ENST00000367053_5end |
EntrezGene: | CR1 |
HGNC: | 2334 |
UniProt: | P17927Q5SR44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.52e-67 | 98 |
blood island | 7.52e-67 | 98 |
hemolymphoid system | 3.83e-64 | 108 |
bone marrow | 4.48e-51 | 76 |
immune system | 2.38e-48 | 93 |
bone element | 2.20e-46 | 82 |
skeletal element | 4.23e-41 | 90 |
skeletal system | 1.10e-35 | 100 |
lateral plate mesoderm | 3.22e-26 | 203 |
blood | 1.36e-16 | 15 |
haemolymphatic fluid | 1.36e-16 | 15 |
organism substance | 1.36e-16 | 15 |
musculoskeletal system | 2.89e-16 | 167 |
connective tissue | 1.79e-14 | 371 |
mesoderm | 2.74e-11 | 315 |
mesoderm-derived structure | 2.74e-11 | 315 |
presumptive mesoderm | 2.74e-11 | 315 |