FFCP PHASE1:Hg19::chr16:128201..128270,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4350 | |EntrezGene=4350 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7211 | |HGNC=7211 | ||
|TSSclassifier=strong | |||
|UniProt=P29372 | |UniProt=P29372 | ||
|association_with_transcript=0bp_to_ENST00000219431,ENST00000475280_5end | |association_with_transcript=0bp_to_ENST00000219431,ENST00000475280_5end | ||
|cluster_id=chr16:128201..128270,+ | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_1_at_MPG_5end | |description=CAGE_peak_1_at_MPG_5end | ||
|id=chr16:128201..128270,+ | |id=chr16:128201..128270,+ | ||
|ontology_enrichment_celltype=CL:0000222!7.92e-28!119;CL:0000055!1.03e-23!180;CL:0000183!3.60e-23!59;CL:0002371!2.01e-21!591;CL:0000680!5.02e-21!57;CL:0000056!5.02e-21!57;CL:0000355!5.02e-21!57;CL:0000144!1.86e-20!625;CL:0000187!1.87e-20!54;CL:0000192!1.04e-18!42;CL:0000514!1.04e-18!42;CL:0000220!1.53e-18!246;CL:0002321!4.47e-18!248;CL:0000393!1.56e-17!60;CL:0000211!1.56e-17!60;CL:0000012!5.27e-17!682;CL:0000548!1.26e-16!679;CL:0000004!1.26e-16!679;CL:0000255!1.26e-16!679;CL:0000359!5.71e-15!32;CL:0000003!7.56e-10!722;CL:0002078!1.58e-09!44;CL:0000057!9.95e-09!75;CL:0000115!1.44e-08!35;CL:0000213!1.19e-07!57;CL:0000215!1.19e-07!57;CL:0000048!5.08e-07!430 | |ontology_enrichment_celltype=CL:0000222!7.92e-28!119;CL:0000055!1.03e-23!180;CL:0000183!3.60e-23!59;CL:0002371!2.01e-21!591;CL:0000680!5.02e-21!57;CL:0000056!5.02e-21!57;CL:0000355!5.02e-21!57;CL:0000144!1.86e-20!625;CL:0000187!1.87e-20!54;CL:0000192!1.04e-18!42;CL:0000514!1.04e-18!42;CL:0000220!1.53e-18!246;CL:0002321!4.47e-18!248;CL:0000393!1.56e-17!60;CL:0000211!1.56e-17!60;CL:0000012!5.27e-17!682;CL:0000548!1.26e-16!679;CL:0000004!1.26e-16!679;CL:0000255!1.26e-16!679;CL:0000359!5.71e-15!32;CL:0000003!7.56e-10!722;CL:0002078!1.58e-09!44;CL:0000057!9.95e-09!75;CL:0000115!1.44e-08!35;CL:0000213!1.19e-07!57;CL:0000215!1.19e-07!57;CL:0000048!5.08e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.05e-14;32!CL:0000192;5.85e-14;43!CL:0000187;8.32e-12;55!CL:0000393;3.09e-09;61!CL:0000211;3.09e-09;61!CL:0000115;1.53e-07;36!CL:0002078;3.17e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.05e-29,121;CL:0000680,1.70e-21,58;CL:0000056,1.70e-21,58;CL:0000355,1.70e-21,58;CL:0000187,6.34e-21,55;CL:0000192,3.54e-19,43;CL:0000514,3.54e-19,43;CL:0002321,8.68e-19,250;CL:0000393,5.52e-18,61;CL:0000211,5.52e-18,61;CL:0000359,5.71e-15,32;CL:0002078,6.26e-10,45;CL:0000057,4.25e-09,76;CL:0000115,5.62e-09,36;CL:0000213,5.37e-08,58;CL:0000215,5.37e-08,58;CL:0000048,1.98e-07,427;CL:0000723,5.35e-07,433;CL:0000034,7.80e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;5.85e-14;43!CL:0000355;1.73e-11;58!CL:0000222;5.70e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.96e-24!83;UBERON:0002329!2.96e-24!83;UBERON:0003077!2.96e-24!83;UBERON:0003059!2.96e-24!83;UBERON:0007282!2.96e-24!83;UBERON:0009618!2.96e-24!83;UBERON:0007285!2.96e-24!83;UBERON:0004290!1.19e-23!70;UBERON:0000486!1.16e-22!82;UBERON:0001134!6.55e-20!61;UBERON:0002036!6.55e-20!61;UBERON:0003082!6.55e-20!61;UBERON:0002049!6.60e-20!79;UBERON:0007798!6.60e-20!79;UBERON:0004872!1.02e-19!84;UBERON:0005256!1.75e-19!143;UBERON:0000055!7.34e-19!69;UBERON:0002385!3.09e-18!63;UBERON:0001015!3.09e-18!63;UBERON:0000383!3.09e-18!63;UBERON:0003914!6.94e-18!118;UBERON:0001981!7.48e-18!60;UBERON:0007500!7.48e-18!60;UBERON:0004537!7.48e-18!60;UBERON:0006965!7.48e-18!60;UBERON:0001637!1.17e-16!42;UBERON:0003509!1.17e-16!42;UBERON:0004572!1.17e-16!42;UBERON:0002100!1.20e-16!216;UBERON:0000490!3.87e-15!138;UBERON:0001009!2.06e-14!113;UBERON:0004535!2.43e-14!110;UBERON:0004573!7.74e-13!33;UBERON:0004571!7.74e-13!33;UBERON:0003104!3.04e-10!238;UBERON:0009142!3.04e-10!238 | |ontology_enrichment_uberon=UBERON:0000914!2.96e-24!83;UBERON:0002329!2.96e-24!83;UBERON:0003077!2.96e-24!83;UBERON:0003059!2.96e-24!83;UBERON:0007282!2.96e-24!83;UBERON:0009618!2.96e-24!83;UBERON:0007285!2.96e-24!83;UBERON:0004290!1.19e-23!70;UBERON:0000486!1.16e-22!82;UBERON:0001134!6.55e-20!61;UBERON:0002036!6.55e-20!61;UBERON:0003082!6.55e-20!61;UBERON:0002049!6.60e-20!79;UBERON:0007798!6.60e-20!79;UBERON:0004872!1.02e-19!84;UBERON:0005256!1.75e-19!143;UBERON:0000055!7.34e-19!69;UBERON:0002385!3.09e-18!63;UBERON:0001015!3.09e-18!63;UBERON:0000383!3.09e-18!63;UBERON:0003914!6.94e-18!118;UBERON:0001981!7.48e-18!60;UBERON:0007500!7.48e-18!60;UBERON:0004537!7.48e-18!60;UBERON:0006965!7.48e-18!60;UBERON:0001637!1.17e-16!42;UBERON:0003509!1.17e-16!42;UBERON:0004572!1.17e-16!42;UBERON:0002100!1.20e-16!216;UBERON:0000490!3.87e-15!138;UBERON:0001009!2.06e-14!113;UBERON:0004535!2.43e-14!110;UBERON:0004573!7.74e-13!33;UBERON:0004571!7.74e-13!33;UBERON:0003104!3.04e-10!238;UBERON:0009142!3.04e-10!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.03e-11;42!UBERON:0003509;1.03e-11;42!UBERON:0004572;1.03e-11;42!UBERON:0004573;1.36e-11;33!UBERON:0004571;1.36e-11;33!UBERON:0007500;8.40e-11;56!UBERON:0001981;8.40e-11;56!UBERON:0004537;8.40e-11;56!UBERON:0003914;2.93e-10;74!UBERON:0000055;2.99e-09;65!UBERON:0002049;9.11e-09;75!UBERON:0007798;9.11e-09;75!UBERON:0000025;9.22e-07;93 | |||
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4241876720206,56.7406231376722 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|short_description=p1@MPG | |short_description=p1@MPG | ||
}} | }} |
Latest revision as of 15:50, 24 September 2015
Short description: | p1@MPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MPG_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000219431, ENST00000475280_5end |
EntrezGene: | MPG |
HGNC: | 7211 |
UniProt: | P29372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.05e-29 | 121 |
muscle precursor cell | 1.70e-21 | 58 |
myoblast | 1.70e-21 | 58 |
multi-potent skeletal muscle stem cell | 1.70e-21 | 58 |
muscle cell | 6.34e-21 | 55 |
smooth muscle cell | 3.54e-19 | 43 |
smooth muscle myoblast | 3.54e-19 | 43 |
embryonic cell | 8.68e-19 | 250 |
electrically responsive cell | 5.52e-18 | 61 |
electrically active cell | 5.52e-18 | 61 |
vascular associated smooth muscle cell | 5.71e-15 | 32 |
meso-epithelial cell | 6.26e-10 | 45 |
fibroblast | 4.25e-09 | 76 |
endothelial cell | 5.62e-09 | 36 |
lining cell | 5.37e-08 | 58 |
barrier cell | 5.37e-08 | 58 |
multi fate stem cell | 1.98e-07 | 427 |
somatic stem cell | 5.35e-07 | 433 |
stem cell | 7.80e-07 | 441 |