FFCP PHASE1:Hg19::chr14:57277163..57277168,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5015 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8522 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000555006_5end | |||
|cluster_id=chr14:57277163..57277168,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_4_at_OTX2_5end | |||
|id=chr14:57277163..57277168,- | |||
|ontology_enrichment_celltype=CL:0002322!4.74e-27!5;CL:0002586!2.18e-18!3;CL:0000147!4.52e-14!14;CL:0000149!6.36e-14!4;CL:0000333!4.19e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002586;5.75e-36;3!CL:0000149;3.61e-27;4!CL:0000147;3.46e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,4.81e-36,3;CL:0000149,3.16e-27,4;CL:0000147,3.34e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.26e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!2.10e-29!5;UBERON:0005388!2.10e-29!5;UBERON:0001802!2.10e-29!5;UBERON:0005743!3.55e-26!86;UBERON:0000073!1.03e-25!94;UBERON:0001016!1.03e-25!94;UBERON:0002346!1.18e-22!90;UBERON:0003075!3.28e-19!86;UBERON:0007284!3.28e-19!86;UBERON:0001781!2.18e-18!3;UBERON:0001782!2.18e-18!3;UBERON:0005424!2.18e-18!3;UBERON:0001017!1.49e-17!82;UBERON:0000955!1.13e-16!69;UBERON:0006238!1.13e-16!69;UBERON:0002616!3.75e-15!59;UBERON:0000924!1.17e-14!173;UBERON:0006601!1.17e-14!173;UBERON:0000033!1.08e-13!123;UBERON:0001049!1.71e-13!57;UBERON:0005068!1.71e-13!57;UBERON:0006241!1.71e-13!57;UBERON:0007135!1.71e-13!57;UBERON:0001905!4.14e-13!2;UBERON:0002757!4.14e-13!2;UBERON:0010134!4.14e-13!2;UBERON:0002784!4.14e-13!2;UBERON:0005408!4.14e-13!2;UBERON:0001899!4.14e-13!2;UBERON:0000153!7.16e-13!129;UBERON:0007811!7.16e-13!129;UBERON:0003056!8.26e-13!61;UBERON:0004121!2.33e-12!169;UBERON:0004733!2.24e-11!12;UBERON:0002028!2.24e-11!12;UBERON:0007277!2.24e-11!12;UBERON:0004732!1.75e-10!13;UBERON:0000970!4.71e-10!20;UBERON:0002104!1.52e-09!21;UBERON:0003076!4.69e-09!15;UBERON:0003057!4.69e-09!15;UBERON:0000020!1.16e-08!23;UBERON:0001896!1.54e-08!3;UBERON:0005290!1.54e-08!3;UBERON:0010096!1.54e-08!3;UBERON:0001032!2.84e-08!24;UBERON:0004456!2.84e-08!24;UBERON:0001894!4.08e-08!7;UBERON:0006222!4.08e-08!7;UBERON:0000019!1.50e-07!19;UBERON:0000047!1.50e-07!19;UBERON:0004088!1.50e-07!19;UBERON:0003072!1.50e-07!19;UBERON:0003071!1.50e-07!19;UBERON:0004128!1.50e-07!19;UBERON:0002780!2.64e-07!41;UBERON:0001890!2.64e-07!41;UBERON:0006240!2.64e-07!41;UBERON:0003080!4.15e-07!42;UBERON:0003296!5.86e-07!4;UBERON:0010133!5.86e-07!4;UBERON:0001456!8.39e-07!21;UBERON:0002298!9.26e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;9.82e-59;5!UBERON:0005388;9.82e-59;5!UBERON:0001802;9.82e-59;5!UBERON:0001781;5.75e-36;3!UBERON:0001782;5.75e-36;3!UBERON:0001905;3.44e-25;2!UBERON:0002757;3.44e-25;2!UBERON:0010134;3.44e-25;2!UBERON:0005408;3.44e-25;2!UBERON:0001899;3.44e-25;2!UBERON:0000970;6.86e-21;20!UBERON:0002104;6.98e-20;21!UBERON:0000020;3.95e-18;23!UBERON:0001032;2.31e-17;24!UBERON:0004456;2.31e-17;24!UBERON:0000019;1.63e-15;19!UBERON:0000047;1.63e-15;19!UBERON:0004088;1.63e-15;19!UBERON:0010230;1.63e-15;19!UBERON:0001456;4.92e-14;21!UBERON:0003296;4.24e-13;4!UBERON:0010133;4.24e-13;4!UBERON:0002784;4.24e-13;4!UBERON:0007625;2.81e-10;11!UBERON:0001894;7.30e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,5.28e-49,6;UBERON:0005388,5.28e-49,6;UBERON:0001802,5.28e-49,6;UBERON:0001782,4.81e-36,3;UBERON:0005424,4.81e-36,3;UBERON:0001781,3.16e-27,4;UBERON:0001905,3.44e-25,2;UBERON:0002757,3.44e-25,2;UBERON:0010134,3.44e-25,2;UBERON:0005408,3.44e-25,2;UBERON:0001899,3.44e-25,2;UBERON:0000970,6.98e-20,21;UBERON:0002104,6.98e-20,21;UBERON:0000020,2.31e-17,24;UBERON:0001032,2.31e-17,24;UBERON:0004456,2.31e-17,24;UBERON:0002346,7.09e-15,86;UBERON:0000019,9.61e-15,20;UBERON:0000047,9.61e-15,20;UBERON:0010312,9.61e-15,20;UBERON:0004088,9.61e-15,20;UBERON:0010230,9.61e-15,20;UBERON:0003072,9.61e-15,20;UBERON:0004128,9.61e-15,20;UBERON:0003071,9.61e-15,20;UBERON:0001456,2.12e-13,22;UBERON:0003296,4.24e-13,4;UBERON:0010133,4.24e-13,4;UBERON:0002784,4.24e-13,4;UBERON:0003075,6.66e-13,82;UBERON:0007284,6.66e-13,82;UBERON:0003056,2.30e-11,61;UBERON:0007625,2.68e-10,11;UBERON:0010371,6.27e-10,104;UBERON:0005085,1.73e-09,31;UBERON:0004121,4.13e-08,171;UBERON:0000924,4.13e-08,171;UBERON:0006601,4.13e-08,171;UBERON:0001894,7.30e-08,7;UBERON:0006222,7.30e-08,7;UBERON:0000955,1.28e-07,68;UBERON:0006238,1.28e-07,68;UBERON:0010314,1.46e-07,132 | |||
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|short_description=p4@OTX2 | |||
}} |
Latest revision as of 17:46, 24 September 2015
Short description: | p4@OTX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_OTX2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000555006_5end |
EntrezGene: | OTX2 |
HGNC: | 8522 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 4.81e-36 | 3 |
visual pigment cell | 3.16e-27 | 4 |
pigment cell | 3.34e-08 | 14 |