FFCP PHASE1:Hg19::chr7:99764744..99764756,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79690 | |EntrezGene=79690 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24145 | |HGNC=24145 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZ77 | |UniProt=C9IZ77 | ||
|association_with_transcript=96bp_to_ENST00000411994_5end | |||
|cluster_id=chr7:99764744..99764756,- | |||
|coexpression_cluster_id=C2911 | |||
|description=CAGE_peak_7_at_GAL3ST4_5end | |||
|id=chr7:99764744..99764756,- | |||
|ontology_enrichment_celltype=CL:0002619!1.46e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000235;5.61e-45;6!CL:0002619;5.44e-23;3!CL:0000473;2.30e-09;39!CL:0000234;2.30e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.31e-45,6;CL:0002619,4.61e-23,3;CL:0002194,2.99e-13,59;CL:0000576,2.99e-13,59;CL:0000040,2.99e-13,59;CL:0000559,2.99e-13,59;CL:0002009,8.22e-13,61;CL:0000839,7.95e-12,66;CL:0000557,1.20e-11,67;CL:0000766,8.05e-11,72;CL:0000473,9.11e-09,48;CL:0000234,9.11e-09,48;CL:0000763,4.28e-07,108;CL:0000049,4.28e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.98e-23;3!UBERON:0003057;8.98e-23;3!UBERON:0006222;1.03e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.20e-47!115;UBERON:0001049!2.74e-35!57;UBERON:0005068!2.74e-35!57;UBERON:0006241!2.74e-35!57;UBERON:0007135!2.74e-35!57;UBERON:0002780!2.24e-27!41;UBERON:0001890!2.24e-27!41;UBERON:0006240!2.24e-27!41;UBERON:0001017!2.87e-27!82;UBERON:0005743!3.98e-27!86;UBERON:0002616!4.08e-27!59;UBERON:0003080!1.50e-26!42;UBERON:0000955!9.49e-25!69;UBERON:0006238!9.49e-25!69;UBERON:0003075!2.07e-24!86;UBERON:0007284!2.07e-24!86;UBERON:0002346!3.24e-24!90;UBERON:0000073!1.68e-23!94;UBERON:0001016!1.68e-23!94;UBERON:0001893!2.81e-21!34;UBERON:0002020!8.05e-21!34;UBERON:0003528!8.05e-21!34;UBERON:0002791!6.29e-20!33;UBERON:0000153!1.83e-18!129;UBERON:0007811!1.83e-18!129;UBERON:0001869!4.01e-18!32;UBERON:0003056!1.60e-17!61;UBERON:0002619!3.45e-17!22;UBERON:0000033!2.08e-16!123;UBERON:0000956!1.00e-14!25;UBERON:0000203!1.00e-14!25;UBERON:0001950!4.76e-14!20;UBERON:0000924!5.60e-13!173;UBERON:0006601!5.60e-13!173;UBERON:0004121!8.50e-13!169;UBERON:0003076!9.60e-10!15;UBERON:0003057!9.60e-10!15;UBERON:0000062!4.90e-09!511;UBERON:0002298!6.81e-09!8;UBERON:0000025!4.97e-08!194;UBERON:0004111!7.72e-08!241;UBERON:0001894!1.06e-07!7;UBERON:0006222!1.06e-07!7;UBERON:0002308!1.23e-07!9;UBERON:0000125!1.23e-07!9;UBERON:0000923!1.44e-07!604;UBERON:0005291!1.44e-07!604;UBERON:0006598!1.44e-07!604;UBERON:0002532!1.44e-07!604;UBERON:0002240!1.46e-07!3;UBERON:0002050!1.61e-07!605;UBERON:0005423!1.61e-07!605;UBERON:0000922!3.49e-07!612;UBERON:0000064!3.62e-07!219;UBERON:0000349!4.23e-07!5;UBERON:0002021!4.37e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;8.98e-23;3!UBERON:0005174;8.98e-23;3!UBERON:0001137;8.98e-23;3!UBERON:0002022;1.03e-17;1!UBERON:0002336;1.03e-17;1!UBERON:0011215;1.03e-17;1!UBERON:0001018;1.03e-17;1!UBERON:0002473;1.03e-17;1!UBERON:0005340;1.03e-17;1!UBERON:0003544;1.03e-17;1!UBERON:0005970;1.03e-17;1!UBERON:0002316;1.03e-17;1!UBERON:0001020;1.03e-17;1!UBERON:0002437;1.03e-17;1!UBERON:0005162;1.57e-09;2!UBERON:0000122;1.57e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.00e-22,3;UBERON:0005174,1.00e-22,3;UBERON:0001137,1.00e-22,3;UBERON:0002336,6.23e-18,1;UBERON:0011215,6.23e-18,1;UBERON:0001018,6.23e-18,1;UBERON:0002473,6.23e-18,1;UBERON:0005340,6.23e-18,1;UBERON:0003544,6.23e-18,1;UBERON:0005970,6.23e-18,1;UBERON:0002316,6.23e-18,1;UBERON:0001020,6.23e-18,1;UBERON:0002437,6.23e-18,1;UBERON:0002022,1.03e-17,1;UBERON:0002371,3.09e-10,76;UBERON:0005162,1.22e-09,2;UBERON:0000122,1.22e-09,2;UBERON:0001474,1.82e-09,82;UBERON:0004765,1.36e-08,90;UBERON:0002405,2.64e-08,93;UBERON:0002390,7.34e-08,98;UBERON:0003061,7.34e-08,98;UBERON:0001434,1.07e-07,100;UBERON:0001049,3.19e-07,56;UBERON:0005068,3.19e-07,56;UBERON:0006241,3.19e-07,56;UBERON:0007135,3.19e-07,56;UBERON:0002193,4.28e-07,108 | |||
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| ||
|short_description=p7@GAL3ST4 | |||
}} | }} |
Latest revision as of 17:48, 24 September 2015
Short description: | p7@GAL3ST4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GAL3ST4_5end |
Coexpression cluster: | C2911_Monocytederived_Macrophage_corpus_spinal_CD14_diencephalon_insula |
Association with transcript: | 96bp_to_ENST00000411994_5end |
EntrezGene: | GAL3ST4 |
HGNC: | 24145 |
UniProt: | C9IZ77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.31e-45 | 6 |
adult endothelial progenitor cell | 4.61e-23 | 3 |
monopoietic cell | 2.99e-13 | 59 |
monocyte | 2.99e-13 | 59 |
monoblast | 2.99e-13 | 59 |
promonocyte | 2.99e-13 | 59 |
macrophage dendritic cell progenitor | 8.22e-13 | 61 |
myeloid lineage restricted progenitor cell | 7.95e-12 | 66 |
granulocyte monocyte progenitor cell | 1.20e-11 | 67 |
myeloid leukocyte | 8.05e-11 | 72 |
defensive cell | 9.11e-09 | 48 |
phagocyte | 9.11e-09 | 48 |
myeloid cell | 4.28e-07 | 108 |
common myeloid progenitor | 4.28e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.00e-22 | 3 |
dorsal region element | 1.00e-22 | 3 |
dorsum | 1.00e-22 | 3 |
corpus callosum | 6.23e-18 | 1 |
central nervous system cell part cluster | 6.23e-18 | 1 |
axon tract | 6.23e-18 | 1 |
intercerebral commissure | 6.23e-18 | 1 |
dorsal telencephalic commissure | 6.23e-18 | 1 |
brain white matter | 6.23e-18 | 1 |
brain commissure | 6.23e-18 | 1 |
white matter | 6.23e-18 | 1 |
nervous system commissure | 6.23e-18 | 1 |
cerebral hemisphere white matter | 6.23e-18 | 1 |
insula | 1.03e-17 | 1 |
bone marrow | 3.09e-10 | 76 |
multi cell component structure | 1.22e-09 | 2 |
neuron projection bundle | 1.22e-09 | 2 |
bone element | 1.82e-09 | 82 |
skeletal element | 1.36e-08 | 90 |
immune system | 2.64e-08 | 93 |
hematopoietic system | 7.34e-08 | 98 |
blood island | 7.34e-08 | 98 |
skeletal system | 1.07e-07 | 100 |
neural tube | 3.19e-07 | 56 |
neural rod | 3.19e-07 | 56 |
future spinal cord | 3.19e-07 | 56 |
neural keel | 3.19e-07 | 56 |
hemolymphoid system | 4.28e-07 | 108 |