FFCP PHASE1:Hg19::chr1:209825762..209825779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3914 | |EntrezGene=3914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6490 | |HGNC=6490 | ||
|TSSclassifier=strong | |||
|UniProt=Q13751 | |UniProt=Q13751 | ||
|association_with_transcript=31bp_to_ENST00000356082_5end | |association_with_transcript=31bp_to_ENST00000356082_5end | ||
|cluster_id=chr1:209825762..209825779,- | |||
|coexpression_cluster_id=C226 | |coexpression_cluster_id=C226 | ||
|description=CAGE_peak_1_at_LAMB3_5end | |description=CAGE_peak_1_at_LAMB3_5end | ||
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|ontology_enrichment_celltype=CL:0000066!4.11e-35!254;CL:0002076!7.87e-28!43;CL:0000223!6.93e-20!59;CL:0002368!2.16e-12!13;CL:0002251!1.65e-11!21;CL:0002202!8.49e-09!9;CL:0002632!8.49e-09!9;CL:0002159!3.42e-07!13 | |ontology_enrichment_celltype=CL:0000066!4.11e-35!254;CL:0002076!7.87e-28!43;CL:0000223!6.93e-20!59;CL:0002368!2.16e-12!13;CL:0002251!1.65e-11!21;CL:0002202!8.49e-09!9;CL:0002632!8.49e-09!9;CL:0002159!3.42e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.89e-26;42!CL:0002251;9.11e-16;20!CL:0002368;2.59e-15;13!CL:0002202;9.55e-11;9!CL:0002632;9.55e-11;9!CL:0002159;2.57e-08;14 | |ontology_enrichment_celltype_v019=CL:0002076;4.89e-26;42!CL:0002251;9.11e-16;20!CL:0002368;2.59e-15;13!CL:0002202;9.55e-11;9!CL:0002632;9.55e-11;9!CL:0002159;2.57e-08;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.64e-41,253;CL:0002076,2.32e-35,42;CL:0000223,9.52e-23,58;CL:0002251,9.39e-16,20;CL:0002368,2.52e-15,13;CL:0002202,9.29e-11,9;CL:0002632,9.29e-11,9;CL:0002159,2.58e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000223;3.83e-12;58!UBERON:0008947;2.26e-10;29!UBERON:0006595;3.94e-09;86 | |ontology_enrichment_development_v019=CL:0000223;3.83e-12;58!UBERON:0008947;2.26e-10;29!UBERON:0006595;3.94e-09;86 | ||
|ontology_enrichment_disease=DOID:305!3.43e-22!106;DOID:0050687!9.13e-14!143;DOID:1749!3.26e-10!14;DOID:299!1.04e-09!25 | |ontology_enrichment_disease=DOID:305!3.43e-22!106;DOID:0050687!9.13e-14!143;DOID:1749!3.26e-10!14;DOID:299!1.04e-09!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;9.71e-13;14!DOID:299;1.84e-09;25 | |ontology_enrichment_disease_v019=DOID:1749;9.71e-13;14!DOID:299;1.84e-09;25 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.32e-23,106;DOID:0050687,6.23e-15,143;DOID:1749,9.62e-13,14;DOID:299,1.85e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.36e-31!169;UBERON:0000925!6.36e-31!169;UBERON:0006595!6.36e-31!169;UBERON:0001007!2.36e-22!155;UBERON:0001555!2.36e-22!155;UBERON:0007026!2.36e-22!155;UBERON:0001004!5.44e-21!72;UBERON:0000077!1.28e-19!130;UBERON:0004921!1.08e-18!129;UBERON:0004185!1.08e-18!129;UBERON:0000065!5.97e-17!53;UBERON:0000062!4.20e-15!511;UBERON:0008947!3.40e-13!38;UBERON:0003258!3.40e-13!38;UBERON:0000464!8.22e-13!104;UBERON:0000072!9.75e-13!46;UBERON:0001041!1.13e-12!98;UBERON:0000922!1.86e-11!612;UBERON:0002050!7.99e-11!605;UBERON:0005423!7.99e-11!605;UBERON:0005911!8.64e-11!82;UBERON:0000161!9.25e-11!35;UBERON:0000923!1.48e-10!604;UBERON:0005291!1.48e-10!604;UBERON:0006598!1.48e-10!604;UBERON:0002532!1.48e-10!604;UBERON:0000466!2.27e-10!126;UBERON:0005153!5.32e-10!37;UBERON:0000467!1.12e-09!625;UBERON:0000480!1.45e-09!626;UBERON:0000468!2.06e-09!659;UBERON:0001008!2.48e-09!45;UBERON:0005178!3.61e-09!34;UBERON:0002224!3.61e-09!34;UBERON:0006554!4.96e-09!44;UBERON:0005181!1.14e-08!35;UBERON:0005156!1.59e-08!59;UBERON:0000990!1.59e-08!59;UBERON:0003104!1.94e-08!238;UBERON:0009142!1.94e-08!238;UBERON:0005631!3.17e-08!14;UBERON:0000158!3.17e-08!14;UBERON:0005157!4.49e-08!51;UBERON:0000064!4.96e-08!219;UBERON:0007196!6.06e-08!14;UBERON:0001558!6.06e-08!14;UBERON:0000166!8.32e-08!21;UBERON:0000926!9.66e-08!448;UBERON:0004120!9.66e-08!448;UBERON:0006603!9.66e-08!448;UBERON:0005177!1.06e-07!107;UBERON:0003064!4.19e-07!37;UBERON:0004175!4.67e-07!25;UBERON:0003100!7.40e-07!41;UBERON:0003133!8.32e-07!48;UBERON:0002048!9.19e-07!22;UBERON:0000117!9.19e-07!22;UBERON:0000171!9.19e-07!22;UBERON:0000170!9.19e-07!22;UBERON:0005597!9.19e-07!22;UBERON:0000118!9.19e-07!22 | |ontology_enrichment_uberon=UBERON:0004119!6.36e-31!169;UBERON:0000925!6.36e-31!169;UBERON:0006595!6.36e-31!169;UBERON:0001007!2.36e-22!155;UBERON:0001555!2.36e-22!155;UBERON:0007026!2.36e-22!155;UBERON:0001004!5.44e-21!72;UBERON:0000077!1.28e-19!130;UBERON:0004921!1.08e-18!129;UBERON:0004185!1.08e-18!129;UBERON:0000065!5.97e-17!53;UBERON:0000062!4.20e-15!511;UBERON:0008947!3.40e-13!38;UBERON:0003258!3.40e-13!38;UBERON:0000464!8.22e-13!104;UBERON:0000072!9.75e-13!46;UBERON:0001041!1.13e-12!98;UBERON:0000922!1.86e-11!612;UBERON:0002050!7.99e-11!605;UBERON:0005423!7.99e-11!605;UBERON:0005911!8.64e-11!82;UBERON:0000161!9.25e-11!35;UBERON:0000923!1.48e-10!604;UBERON:0005291!1.48e-10!604;UBERON:0006598!1.48e-10!604;UBERON:0002532!1.48e-10!604;UBERON:0000466!2.27e-10!126;UBERON:0005153!5.32e-10!37;UBERON:0000467!1.12e-09!625;UBERON:0000480!1.45e-09!626;UBERON:0000468!2.06e-09!659;UBERON:0001008!2.48e-09!45;UBERON:0005178!3.61e-09!34;UBERON:0002224!3.61e-09!34;UBERON:0006554!4.96e-09!44;UBERON:0005181!1.14e-08!35;UBERON:0005156!1.59e-08!59;UBERON:0000990!1.59e-08!59;UBERON:0003104!1.94e-08!238;UBERON:0009142!1.94e-08!238;UBERON:0005631!3.17e-08!14;UBERON:0000158!3.17e-08!14;UBERON:0005157!4.49e-08!51;UBERON:0000064!4.96e-08!219;UBERON:0007196!6.06e-08!14;UBERON:0001558!6.06e-08!14;UBERON:0000166!8.32e-08!21;UBERON:0000926!9.66e-08!448;UBERON:0004120!9.66e-08!448;UBERON:0006603!9.66e-08!448;UBERON:0005177!1.06e-07!107;UBERON:0003064!4.19e-07!37;UBERON:0004175!4.67e-07!25;UBERON:0003100!7.40e-07!41;UBERON:0003133!8.32e-07!48;UBERON:0002048!9.19e-07!22;UBERON:0000117!9.19e-07!22;UBERON:0000171!9.19e-07!22;UBERON:0000170!9.19e-07!22;UBERON:0005597!9.19e-07!22;UBERON:0000118!9.19e-07!22 | ||
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| ||
|short_description=p1@LAMB3 | |short_description=p1@LAMB3 | ||
}} | }} |
Latest revision as of 19:43, 24 September 2015
Short description: | p1@LAMB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LAMB3_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 31bp_to_ENST00000356082_5end |
EntrezGene: | LAMB3 |
HGNC: | 6490 |
UniProt: | Q13751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.64e-41 | 253 |
endo-epithelial cell | 2.32e-35 | 42 |
endodermal cell | 9.52e-23 | 58 |
epithelial cell of alimentary canal | 9.39e-16 | 20 |
respiratory epithelial cell | 2.52e-15 | 13 |
epithelial cell of tracheobronchial tree | 9.29e-11 | 9 |
epithelial cell of lower respiratory tract | 9.29e-11 | 9 |
general ecto-epithelial cell | 2.58e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.32e-23 | 106 |
cell type cancer | 6.23e-15 | 143 |
squamous cell carcinoma | 9.62e-13 | 14 |
adenocarcinoma | 1.85e-09 | 25 |