FFCP PHASE1:Hg19::chr9:124048392..124048418,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2934 | |EntrezGene=2934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4620 | |HGNC=4620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477104,uc011lyh.1_5end | |association_with_transcript=0bp_to_ENST00000477104,uc011lyh.1_5end | ||
|cluster_id=chr9:124048392..124048418,+ | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_3_at_GSN_5end | |description=CAGE_peak_3_at_GSN_5end | ||
|id=chr9:124048392..124048418,+ | |id=chr9:124048392..124048418,+ | ||
|ontology_enrichment_celltype=CL:0002139!3.75e-16!24;CL:0000115!1.47e-15!35;CL:0000071!2.63e-12!18;CL:0002546!2.63e-12!18;CL:0002078!2.59e-11!44;CL:0000222!7.10e-07!119 | |ontology_enrichment_celltype=CL:0002139!3.75e-16!24;CL:0000115!1.47e-15!35;CL:0000071!2.63e-12!18;CL:0002546!2.63e-12!18;CL:0002078!2.59e-11!44;CL:0000222!7.10e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.55e-32;24!CL:0000115;2.08e-24;36!CL:0000071;1.02e-23;18!CL:0002078;1.09e-13;45!CL:1000413;6.41e-12;9!CL:0002138;8.25e-10;6!CL:0002543;1.40e-09;6!CL:0000213;6.88e-09;58!CL:0000215;6.88e-09;58!CL:0002544;1.38e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.62e-33,24;CL:0000115,1.47e-29,36;CL:0000071,1.71e-24,18;CL:0002546,1.71e-24,18;CL:0002078,9.32e-22,45;CL:0000213,7.11e-15,58;CL:0000215,7.11e-15,58;CL:1000413,2.45e-12,9;CL:0002543,7.50e-10,6;CL:0005020,8.77e-10,6;CL:0002138,8.77e-10,6;CL:0005022,8.77e-10,6;CL:0002544,7.41e-09,6;CL:0000222,2.44e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;1.02e-23;18!CL:0005022;8.25e-10;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;1.73e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.23e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001009!9.36e-21!113;UBERON:0004535!6.12e-19!110;UBERON:0000055!2.84e-18!69;UBERON:0002049!2.21e-17!79;UBERON:0007798!2.21e-17!79;UBERON:0001981!1.17e-15!60;UBERON:0007500!1.17e-15!60;UBERON:0004537!1.17e-15!60;UBERON:0006965!1.17e-15!60;UBERON:0004872!6.93e-15!84;UBERON:0007023!1.11e-13!115;UBERON:0001986!2.63e-12!18;UBERON:0004638!2.63e-12!18;UBERON:0004852!2.63e-12!18;UBERON:0003914!5.66e-11!118;UBERON:0004111!2.29e-09!241;UBERON:0000487!2.03e-08!22;UBERON:0000477!2.31e-08!286;UBERON:0000025!1.27e-07!194;UBERON:0001637!4.71e-07!42;UBERON:0003509!4.71e-07!42;UBERON:0004572!4.71e-07!42;UBERON:0000468!5.48e-07!659;UBERON:0006914!5.68e-07!25 | |ontology_enrichment_uberon=UBERON:0001009!9.36e-21!113;UBERON:0004535!6.12e-19!110;UBERON:0000055!2.84e-18!69;UBERON:0002049!2.21e-17!79;UBERON:0007798!2.21e-17!79;UBERON:0001981!1.17e-15!60;UBERON:0007500!1.17e-15!60;UBERON:0004537!1.17e-15!60;UBERON:0006965!1.17e-15!60;UBERON:0004872!6.93e-15!84;UBERON:0007023!1.11e-13!115;UBERON:0001986!2.63e-12!18;UBERON:0004638!2.63e-12!18;UBERON:0004852!2.63e-12!18;UBERON:0003914!5.66e-11!118;UBERON:0004111!2.29e-09!241;UBERON:0000487!2.03e-08!22;UBERON:0000477!2.31e-08!286;UBERON:0000025!1.27e-07!194;UBERON:0001637!4.71e-07!42;UBERON:0003509!4.71e-07!42;UBERON:0004572!4.71e-07!42;UBERON:0000468!5.48e-07!659;UBERON:0006914!5.68e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.02e-23;18!UBERON:0001986;1.02e-23;18!UBERON:0004852;1.02e-23;18!UBERON:0000487;2.09e-18;22!UBERON:0006914;1.49e-15;25!UBERON:0003915;6.41e-12;9!UBERON:0004700;6.41e-12;9!UBERON:0001917;6.41e-12;9!UBERON:0000055;1.93e-11;65!UBERON:0000490;8.20e-10;33!UBERON:0001009;1.09e-09;112!UBERON:0007500;1.62e-09;56!UBERON:0001981;1.62e-09;56!UBERON:0004537;1.62e-09;56!UBERON:0001473;3.09e-09;8!UBERON:0004536;3.09e-09;8!UBERON:0006558;3.09e-09;8!UBERON:0002465;5.09e-09;10!UBERON:0001638;6.83e-08;9!UBERON:0003920;6.83e-08;9!UBERON:0004582;6.83e-08;9!UBERON:0004535;6.96e-08;109!UBERON:0002049;1.50e-07;75!UBERON:0007798;1.50e-07;75!UBERON:0000947;1.55e-07;21!UBERON:0010191;1.55e-07;21!UBERON:0003296;5.60e-07;4!UBERON:0010133;5.60e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,3.64e-26,112;UBERON:0000055,1.97e-25,68;UBERON:0004638,1.71e-24,18;UBERON:0001986,1.71e-24,18;UBERON:0004852,1.71e-24,18;UBERON:0004535,5.31e-23,109;UBERON:0002049,9.38e-22,78;UBERON:0007798,9.38e-22,78;UBERON:0007500,2.65e-19,59;UBERON:0001981,2.65e-19,59;UBERON:0004537,2.65e-19,59;UBERON:0006965,2.65e-19,59;UBERON:0000487,5.10e-19,22;UBERON:0004872,1.38e-17,83;UBERON:0006914,4.42e-16,25;UBERON:0003914,9.25e-16,117;UBERON:0003915,2.45e-12,9;UBERON:0004700,2.45e-12,9;UBERON:0001917,2.45e-12,9;UBERON:0004111,9.54e-10,240;UBERON:0001473,2.93e-09,8;UBERON:0004536,2.93e-09,8;UBERON:0006558,2.93e-09,8;UBERON:0002465,4.70e-09,10;UBERON:0003081,4.29e-08,203;UBERON:0001638,4.53e-08,9;UBERON:0003920,4.53e-08,9;UBERON:0004582,4.53e-08,9;UBERON:0007023,8.80e-08,114;UBERON:0000025,8.97e-08,192;UBERON:0000947,1.17e-07,21;UBERON:0010191,1.17e-07,21;UBERON:0000966,3.78e-07,6;UBERON:0005388,3.78e-07,6;UBERON:0001802,3.78e-07,6;UBERON:0001781,3.89e-07,4;UBERON:0003296,5.10e-07,4;UBERON:0010133,5.10e-07,4;UBERON:0007100,8.75e-07,27 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.422863212287913,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0.994192127183747,2.01697543935533,3.61616716814386,2.92124036154949,1.46379839637152,0.123121058076788,1.02000345622126,1.25381888591235,0,0.410623275218653,0.125542639594803,0,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0,0.369754010166788,0,0,0.293600439334847,0,0,0,1.34349284543955,0.647787332037959,0.515151135268373,0,0,0.242584061187816,0,0.411167888021826,0.619412741790207,0,0,0.236482229888585,0.344745680736619,0,0,0.564727018627814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.434539556882471,0,0.973269740605272,0.472674085820339,1.10864698731282,0.263504357079378,0.327447688744282,0,0,0.324547393654683,0,0,0.238490624305342,0,0,2.78267370313387,1.72046919021225,1.73570250803797,2.82653970962005,3.35599548967925,1.6507082516404,1.46296476575767,3.6178346283706,3.5576626268671,2.34304428935269,4.43112248820062,1.52054421143703,4.39311703586705,2.20597848207521,2.43042584364528,2.85759130509055,2.91888184414021,2.81528701208306,6.13266549863533,2.84779697870439,3.48083313467774,0,0,0,0,0.759783069987479,1.19168262731897,0.573673241497627,0,2.24271040056923,0,1.72667283892012,0,0.808264032418128,0.326923806226917,0,0,0.234321431833797,0.936480230490962,0,0.298897361103602,0.352303495931295,0.809364721840658,0.280901613404497,0.816616685019573,0.61417158655884,0.516628905878827,1.18800285728205,0,0,1.43723628363248,0.168336113954066,0.250237039743928,0.554128230968366,0.438977620880838,0.919463387397059,0,1.13432183160021,0.89694817844431,0.213557388818567,0,0.300091096084402,0.309157587715317,1.03056216018252,0.558350568994769,0.506328996723799,0.584622030967192,1.51460264546469,0.276149695926898,0,0.710019185033229,0.806016785821122,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,2.21446636387394,7.01208869017229,1.2347220339942,2.94017422771084,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0.185176890317059,0,0,0,0.463721619900307,0.117408694235822,3.60916119402685,3.70388410061289,2.47330397904978,0,0,0,0.234004265139238,0.148631162288728,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0.25248486685276,0,0.381988425558278,1.17217447210047,0,0.102827492703324,0.300343057843917,0,0.336393253036082,0,0.4400297149257,0,0,0,0,0,0,0,0.532844358032199,0.285955987316295,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0.723906533337896,0.61642896765115,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0.12269149171914,1.00034104211935,0,0.415941723061614,0.178428988797162,0,0.585707074963566,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.195801157462741,1.71571711905428,0.206768026122887,0,0,0,0,0,0.744323423456331,1.07423381301644,1.40330047216537,0.512556597022804,1.02341449813341,0.321707842287215,0,0,0.177561725313127,0,0,0.232420756919918,0,0.200506470303285,0,0.229628896329213,0,0.524497659837696,0.451199612907412,0,0.784349769176855,1.46139224653261,0.105551628892876,7.96133688496276,1.36074964221213,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0.219259876645935,0.522870902049801,2.3080511260475,5.24823433119529,5.53143270929315,0.618246069886334,0.183138929636687,0.82509499920588,0,0,0,0.386682873168488,0,0.460511024178389,0.275673144969061,0.322260734604821,0.435050081742686,0.255679882248303,6.32127453091835,0,0.192190067365106,0,0,0.929691098594572,0.31481234683064,0,0,0.532306030317022,0,0.9266210955196,0.286249773483982,0.372158369359667,0,0.190630193923825,0,0,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0.606547444719948,0,0.421258456238981,0,0,2.11300293513511,0.136499911407986,0,0,0,0,0.438450885253763,1.15755106853338,0,0.811641507850816,0.30982349809975,0.563391205064483,0.717056761020258,0.392996164052485,1.07001315444375,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.376575203107117,0,0,0,0,2.53723804616085,2.29391162142713,2.27858874869665,0.476463550915578,0.822724546172388,0.648473311192717,2.70015718619057,3.96562588147135,0.640944426764839,0,0,0,1.298422916788,0,0,2.3949524571938,0.957526850661834,5.92686031626872,4.54470716384378,0.842391534340376,2.9670508274315,0,2.50634477090067,2.53937666702405,0.1605880751037,0,0.851692475380653,2.74804275804612,4.30137070031841,2.46043718681657,2.33588798396672,0.390776190804081,1.11362469558097,0,1.08182271390393,15.6543824958975,0,0,2.4906390476222,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.19548792950642,0.828851746593443,0,0.715880777515084,0,1.24415835064723,0.0898683511473268,0,1.02314474045374,1.08507746200627,0,2.22273980289274,0,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| ||
|short_description=p3@GSN | |short_description=p3@GSN | ||
}} | }} |
Latest revision as of 20:42, 24 September 2015
Short description: | p3@GSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GSN_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000477104, uc011lyh.1_5end |
EntrezGene: | GSN |
HGNC: | 4620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.62e-33 | 24 |
endothelial cell | 1.47e-29 | 36 |
blood vessel endothelial cell | 1.71e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.71e-24 | 18 |
meso-epithelial cell | 9.32e-22 | 45 |
lining cell | 7.11e-15 | 58 |
barrier cell | 7.11e-15 | 58 |
endothelial cell of artery | 2.45e-12 | 9 |
vein endothelial cell | 7.50e-10 | 6 |
lymphangioblast | 8.77e-10 | 6 |
endothelial cell of lymphatic vessel | 8.77e-10 | 6 |
vascular lymphangioblast | 8.77e-10 | 6 |
aortic endothelial cell | 7.41e-09 | 6 |
mesodermal cell | 2.44e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.23e-07 | 31 |