FFCP PHASE1:Hg19::chr4:119757345..119757356,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9871 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10706 | |||
|TSSclassifier=strong | |||
|UniProt=A8K6V0,O94855 | |||
|association_with_transcript=-19bp_to_ENST00000379735,NM_014822,uc003ici.3,uc003icj.3_5end | |||
|cluster_id=chr4:119757345..119757356,- | |||
|description=CAGE_peak_4_at_SEC24D_5end | |||
|id=chr4:119757345..119757356,- | |||
|ontology_enrichment_celltype=CL:0000048!7.31e-22!430;CL:0000034!1.13e-20!444;CL:0000723!3.25e-20!436;CL:0000055!3.24e-17!180;CL:0002371!3.79e-16!591;CL:0000144!6.72e-15!625;CL:0002320!2.84e-13!365;CL:0000134!5.85e-13!358;CL:0000057!6.94e-13!75;CL:0000219!1.75e-10!390;CL:0000548!2.92e-10!679;CL:0000004!2.92e-10!679;CL:0000255!2.92e-10!679;CL:0000012!1.34e-09!682;CL:0000680!2.06e-09!57;CL:0000056!2.06e-09!57;CL:0000355!2.06e-09!57;CL:0000192!2.87e-09!42;CL:0000514!2.87e-09!42;CL:0000187!3.14e-09!54;CL:0000183!1.16e-08!59;CL:0000766!2.04e-08!76;CL:0000393!2.51e-08!60;CL:0000211!2.51e-08!60;CL:0000557!2.52e-08!71;CL:0000003!4.04e-08!722;CL:0000359!6.10e-08!32;CL:0002009!9.34e-08!65;CL:0002194!3.93e-07!63;CL:0000576!3.93e-07!63;CL:0000040!3.93e-07!63;CL:0000559!3.93e-07!63;CL:0002620!6.93e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.04e-07;32!CL:0000192;2.31e-07;43!CL:0002334;5.66e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.24e-24,427;CL:0000034,2.34e-23,441;CL:0000723,1.19e-22,433;CL:0000057,2.99e-15,76;CL:0000134,1.35e-14,354;CL:0002320,1.47e-14,361;CL:0000219,1.50e-12,386;CL:0000680,8.84e-10,58;CL:0000056,8.84e-10,58;CL:0000355,8.84e-10,58;CL:0000187,1.44e-09,55;CL:0000192,2.30e-09,43;CL:0000514,2.30e-09,43;CL:0000766,3.22e-09,72;CL:0000557,4.23e-09,67;CL:0002009,1.11e-08,61;CL:0000393,1.77e-08,61;CL:0000211,1.77e-08,61;CL:0000359,2.64e-08,32;CL:0002194,5.68e-08,59;CL:0000576,5.68e-08,59;CL:0000040,5.68e-08,59;CL:0000559,5.68e-08,59;CL:0000839,1.22e-07,66;CL:0000473,5.33e-07,48;CL:0000234,5.33e-07,48;CL:0002620,5.73e-07,23;CL:0002334,9.01e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;2.31e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.48e-17!216;UBERON:0002204!7.98e-17!167;UBERON:0002384!1.87e-14!375;UBERON:0000926!2.24e-11!448;UBERON:0004120!2.24e-11!448;UBERON:0006603!2.24e-11!448;UBERON:0000914!4.96e-09!83;UBERON:0002329!4.96e-09!83;UBERON:0003077!4.96e-09!83;UBERON:0003059!4.96e-09!83;UBERON:0007282!4.96e-09!83;UBERON:0009618!4.96e-09!83;UBERON:0007285!4.96e-09!83;UBERON:0001637!1.26e-08!42;UBERON:0003509!1.26e-08!42;UBERON:0004572!1.26e-08!42;UBERON:0004765!1.82e-08!101;UBERON:0001434!1.82e-08!101;UBERON:0004535!3.20e-08!110;UBERON:0002371!3.27e-08!80;UBERON:0001981!4.43e-08!60;UBERON:0007500!4.43e-08!60;UBERON:0004537!4.43e-08!60;UBERON:0006965!4.43e-08!60;UBERON:0002049!4.51e-08!79;UBERON:0007798!4.51e-08!79;UBERON:0002385!1.11e-07!63;UBERON:0001015!1.11e-07!63;UBERON:0000383!1.11e-07!63;UBERON:0004290!1.27e-07!70;UBERON:0004872!1.34e-07!84;UBERON:0001474!1.53e-07!86;UBERON:0001134!1.59e-07!61;UBERON:0002036!1.59e-07!61;UBERON:0003082!1.59e-07!61;UBERON:0002390!1.85e-07!102;UBERON:0003061!1.85e-07!102;UBERON:0000055!1.98e-07!69;UBERON:0001009!3.37e-07!113;UBERON:0002193!6.05e-07!112;UBERON:0000486!6.32e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.92e-07;42!UBERON:0003509;8.92e-07;42!UBERON:0004572;8.92e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,6.79e-22,315;UBERON:0004120,6.79e-22,315;UBERON:0006603,6.79e-22,315;UBERON:0003081,1.09e-19,203;UBERON:0002204,9.65e-17,167;UBERON:0002384,1.05e-15,371;UBERON:0004535,4.64e-09,109;UBERON:0001637,1.11e-08,42;UBERON:0003509,1.11e-08,42;UBERON:0004572,1.11e-08,42;UBERON:0002371,1.34e-08,76;UBERON:0002385,3.54e-08,64;UBERON:0001015,3.54e-08,64;UBERON:0000383,3.54e-08,64;UBERON:0001009,3.75e-08,112;UBERON:0002049,4.26e-08,78;UBERON:0007798,4.26e-08,78;UBERON:0007500,4.29e-08,59;UBERON:0001981,4.29e-08,59;UBERON:0004537,4.29e-08,59;UBERON:0006965,4.29e-08,59;UBERON:0001134,5.30e-08,62;UBERON:0002036,5.30e-08,62;UBERON:0003082,5.30e-08,62;UBERON:0002329,5.66e-08,71;UBERON:0003059,5.66e-08,71;UBERON:0007282,5.66e-08,71;UBERON:0004290,5.66e-08,71;UBERON:0009618,5.66e-08,71;UBERON:0004872,6.23e-08,83;UBERON:0001474,6.35e-08,82;UBERON:0001434,6.51e-08,100;UBERON:0007524,6.88e-08,73;UBERON:0007503,9.64e-08,78;UBERON:0002390,1.05e-07,98;UBERON:0003061,1.05e-07,98;UBERON:0003077,1.31e-07,72;UBERON:0007285,1.31e-07,72;UBERON:0000055,1.43e-07,68;UBERON:0002193,2.97e-07,108;UBERON:0000486,4.37e-07,83;UBERON:0004765,6.45e-07,90;UBERON:0002405,6.84e-07,93 | |||
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| |||
|short_description=p4@SEC24D | |||
}} |
Latest revision as of 21:25, 24 September 2015
Short description: | p4@SEC24D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEC24D_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000379735, NM_014822, uc003ici.3, uc003icj.3_5end |
EntrezGene: | SEC24D |
HGNC: | 10706 |
UniProt: | A8K6V0O94855 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.24e-24 | 427 |
stem cell | 2.34e-23 | 441 |
somatic stem cell | 1.19e-22 | 433 |
fibroblast | 2.99e-15 | 76 |
mesenchymal cell | 1.35e-14 | 354 |
connective tissue cell | 1.47e-14 | 361 |
motile cell | 1.50e-12 | 386 |
muscle precursor cell | 8.84e-10 | 58 |
myoblast | 8.84e-10 | 58 |
multi-potent skeletal muscle stem cell | 8.84e-10 | 58 |
muscle cell | 1.44e-09 | 55 |
smooth muscle cell | 2.30e-09 | 43 |
smooth muscle myoblast | 2.30e-09 | 43 |
myeloid leukocyte | 3.22e-09 | 72 |
granulocyte monocyte progenitor cell | 4.23e-09 | 67 |
macrophage dendritic cell progenitor | 1.11e-08 | 61 |
electrically responsive cell | 1.77e-08 | 61 |
electrically active cell | 1.77e-08 | 61 |
vascular associated smooth muscle cell | 2.64e-08 | 32 |
monopoietic cell | 5.68e-08 | 59 |
monocyte | 5.68e-08 | 59 |
monoblast | 5.68e-08 | 59 |
promonocyte | 5.68e-08 | 59 |
myeloid lineage restricted progenitor cell | 1.22e-07 | 66 |
defensive cell | 5.33e-07 | 48 |
phagocyte | 5.33e-07 | 48 |
skin fibroblast | 5.73e-07 | 23 |
preadipocyte | 9.01e-07 | 12 |