FFCP PHASE1:Hg19::chr20:30639998..30640001,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:30639998..30640001,+ to FFCP PHASE1:Hg19::chr20:30639998..30640001,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3055 | |EntrezGene=3055 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4840 | |HGNC=4840 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000375862_5end | |||
|cluster_id=chr20:30639998..30640001,+ | |||
|description=CAGE_peak_2_at_HCK_5end | |||
|id=chr20:30639998..30640001,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.89e-58!65;CL:0000763!3.49e-57!112;CL:0000049!3.49e-57!112;CL:0002194!1.67e-56!63;CL:0000576!1.67e-56!63;CL:0000040!1.67e-56!63;CL:0000559!1.67e-56!63;CL:0000037!1.76e-56!172;CL:0000566!1.76e-56!172;CL:0000557!1.65e-55!71;CL:0000738!2.38e-55!140;CL:0000766!9.14e-55!76;CL:0002032!5.72e-53!165;CL:0000837!5.72e-53!165;CL:0000988!1.91e-51!182;CL:0000839!2.21e-50!70;CL:0002057!3.83e-50!42;CL:0002087!6.92e-48!119;CL:0000860!1.18e-45!45;CL:0002031!6.56e-43!124;CL:0000134!6.75e-13!358;CL:0002393!1.97e-12!9;CL:0002397!1.97e-12!9;CL:0002320!4.36e-12!365;CL:0000451!2.30e-10!10;CL:0000219!2.58e-09!390;CL:0000990!7.80e-09!8;CL:0000945!1.05e-07!24;CL:0000826!1.05e-07!24;CL:0000453!6.22e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.88e-55;33!CL:0002057;1.88e-55;33!CL:0000576;3.77e-53;48!CL:0000473;2.79e-50;39!CL:0000234;2.79e-50;39!CL:0000766;5.10e-38;69!CL:0000763;1.02e-20;100!CL:0002393;2.80e-17;6!CL:0002397;2.80e-17;6!CL:0000738;1.34e-16;136!CL:0002087;7.48e-15;104!CL:0000990;1.73e-10;8!CL:0000988;1.64e-09;177!CL:0000875;5.31e-09;3!CL:0002396;5.31e-09;3!CL:0000451;1.89e-08;10!CL:0000235;7.30e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.02e-93,59;CL:0000576,1.02e-93,59;CL:0000040,1.02e-93,59;CL:0000559,1.02e-93,59;CL:0000473,1.58e-90,48;CL:0000234,1.58e-90,48;CL:0002009,2.76e-90,61;CL:0000766,1.56e-85,72;CL:0000557,8.49e-85,67;CL:0000860,2.71e-84,42;CL:0002057,2.71e-84,42;CL:0000839,1.33e-82,66;CL:0000763,4.28e-77,108;CL:0000049,4.28e-77,108;CL:0000738,3.46e-61,136;CL:0000037,9.55e-59,168;CL:0002087,1.17e-58,115;CL:0002032,1.11e-57,161;CL:0000837,1.11e-57,161;CL:0000988,5.19e-55,177;CL:0002031,3.81e-51,120;CL:0002393,5.59e-25,9;CL:0002397,5.59e-25,9;CL:0000134,5.33e-20,354;CL:0002320,2.56e-19,361;CL:0000219,6.43e-17,386;CL:0000048,5.50e-14,427;CL:0000723,1.39e-13,433;CL:0000034,4.64e-13,441;CL:0000990,1.00e-10,8;CL:0000875,4.93e-09,3;CL:0002396,4.93e-09,3;CL:0000451,1.22e-08,10;CL:0000235,6.47e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;6.40e-59;42!CL:0000049;3.88e-23;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-56!102;UBERON:0003061!1.12e-56!102;UBERON:0002193!4.71e-52!112;UBERON:0002371!1.27e-48!80;UBERON:0001474!1.21e-43!86;UBERON:0002405!1.69e-38!115;UBERON:0004765!7.55e-34!101;UBERON:0001434!7.55e-34!101;UBERON:0003081!3.26e-15!216;UBERON:0002204!1.36e-13!167;UBERON:0007023!1.26e-11!115;UBERON:0002384!2.07e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.42e-76,76;UBERON:0002390,4.68e-73,98;UBERON:0003061,4.68e-73,98;UBERON:0001474,4.24e-70,82;UBERON:0002193,4.44e-65,108;UBERON:0002405,4.17e-63,93;UBERON:0004765,8.54e-63,90;UBERON:0001434,2.70e-55,100;UBERON:0003081,2.45e-28,203;UBERON:0002204,3.96e-28,167;UBERON:0002384,2.18e-18,371;UBERON:0000926,2.38e-14,315;UBERON:0004120,2.38e-14,315;UBERON:0006603,2.38e-14,315 | |||
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|short_description=p2@HCK | |||
}} | }} |
Latest revision as of 02:09, 25 September 2015
Short description: | p2@HCK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HCK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375862_5end |
EntrezGene: | HCK |
HGNC: | 4840 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.42e-76 | 76 |
hematopoietic system | 4.68e-73 | 98 |
blood island | 4.68e-73 | 98 |
bone element | 4.24e-70 | 82 |
hemolymphoid system | 4.44e-65 | 108 |
immune system | 4.17e-63 | 93 |
skeletal element | 8.54e-63 | 90 |
skeletal system | 2.70e-55 | 100 |
lateral plate mesoderm | 2.45e-28 | 203 |
musculoskeletal system | 3.96e-28 | 167 |
connective tissue | 2.18e-18 | 371 |
mesoderm | 2.38e-14 | 315 |
mesoderm-derived structure | 2.38e-14 | 315 |
presumptive mesoderm | 2.38e-14 | 315 |