FFCP PHASE1:Hg19::chr19:10812108..10812136,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81890 | |EntrezGene=81890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23797 | |HGNC=23797 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXR0,B4DFM7,Q71RF8 | |UniProt=Q9BXR0,B4DFM7,Q71RF8 | ||
|association_with_transcript=0bp_to_ENST00000250237,ENST00000421333,NM_031209,uc002mpr.2_5end | |association_with_transcript=0bp_to_ENST00000250237,ENST00000421333,NM_031209,uc002mpr.2_5end | ||
|cluster_id=chr19:10812108..10812136,+ | |||
|description=CAGE_peak_1_at_QTRT1_5end | |description=CAGE_peak_1_at_QTRT1_5end | ||
|id=chr19:10812108..10812136,+ | |id=chr19:10812108..10812136,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.10e-12!90;UBERON:0001049!4.37e-11!57;UBERON:0005068!4.37e-11!57;UBERON:0006241!4.37e-11!57;UBERON:0007135!4.37e-11!57;UBERON:0000073!5.35e-11!94;UBERON:0001016!5.35e-11!94;UBERON:0003075!2.68e-10!86;UBERON:0007284!2.68e-10!86;UBERON:0001017!4.51e-10!82;UBERON:0002020!6.48e-10!34;UBERON:0003528!6.48e-10!34;UBERON:0005743!1.83e-09!86;UBERON:0002791!1.85e-09!33;UBERON:0001893!1.88e-09!34;UBERON:0002780!2.23e-09!41;UBERON:0001890!2.23e-09!41;UBERON:0006240!2.23e-09!41;UBERON:0000955!5.88e-09!69;UBERON:0006238!5.88e-09!69;UBERON:0001869!6.60e-09!32;UBERON:0002616!7.20e-09!59;UBERON:0003080!1.31e-08!42;UBERON:0003056!3.01e-08!61;UBERON:0002619!5.22e-08!22;UBERON:0000924!1.72e-07!173;UBERON:0006601!1.72e-07!173;UBERON:0001950!2.67e-07!20 | |ontology_enrichment_uberon=UBERON:0002346!7.10e-12!90;UBERON:0001049!4.37e-11!57;UBERON:0005068!4.37e-11!57;UBERON:0006241!4.37e-11!57;UBERON:0007135!4.37e-11!57;UBERON:0000073!5.35e-11!94;UBERON:0001016!5.35e-11!94;UBERON:0003075!2.68e-10!86;UBERON:0007284!2.68e-10!86;UBERON:0001017!4.51e-10!82;UBERON:0002020!6.48e-10!34;UBERON:0003528!6.48e-10!34;UBERON:0005743!1.83e-09!86;UBERON:0002791!1.85e-09!33;UBERON:0001893!1.88e-09!34;UBERON:0002780!2.23e-09!41;UBERON:0001890!2.23e-09!41;UBERON:0006240!2.23e-09!41;UBERON:0000955!5.88e-09!69;UBERON:0006238!5.88e-09!69;UBERON:0001869!6.60e-09!32;UBERON:0002616!7.20e-09!59;UBERON:0003080!1.31e-08!42;UBERON:0003056!3.01e-08!61;UBERON:0002619!5.22e-08!22;UBERON:0000924!1.72e-07!173;UBERON:0006601!1.72e-07!173;UBERON:0001950!2.67e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.22e-08;34!UBERON:0002020;1.22e-08;34!UBERON:0002791;2.29e-08;32!UBERON:0001893;4.70e-08;34!UBERON:0001869;5.07e-08;32!UBERON:0002619;5.07e-08;22!UBERON:0001950;2.76e-07;20!UBERON:0002780;3.60e-07;41!UBERON:0001890;3.60e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0003528;1.22e-08;34!UBERON:0002020;1.22e-08;34!UBERON:0002791;2.29e-08;32!UBERON:0001893;4.70e-08;34!UBERON:0001869;5.07e-08;32!UBERON:0002619;5.07e-08;22!UBERON:0001950;2.76e-07;20!UBERON:0002780;3.60e-07;41!UBERON:0001890;3.60e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.27e-13,86;UBERON:0001016,3.11e-12,89;UBERON:0003075,6.27e-12,82;UBERON:0007284,6.27e-12,82;UBERON:0001049,7.55e-12,56;UBERON:0005068,7.55e-12,56;UBERON:0006241,7.55e-12,56;UBERON:0007135,7.55e-12,56;UBERON:0000073,4.68e-11,53;UBERON:0002616,4.68e-11,53;UBERON:0001017,1.20e-10,81;UBERON:0003528,6.48e-10,34;UBERON:0002020,6.48e-10,34;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001893,1.88e-09,34;UBERON:0002791,2.08e-09,32;UBERON:0002780,2.23e-09,41;UBERON:0001890,2.23e-09,41;UBERON:0003080,2.23e-09,41;UBERON:0006240,2.23e-09,41;UBERON:0003056,3.62e-09,61;UBERON:0001869,6.60e-09,32;UBERON:0010371,6.74e-09,104;UBERON:0004121,4.12e-08,171;UBERON:0000924,4.12e-08,171;UBERON:0006601,4.12e-08,171;UBERON:0002619,5.22e-08,22;UBERON:0010314,5.86e-08,132;UBERON:0001950,2.67e-07,20 | |||
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| ||
|short_description=p1@QTRT1 | |short_description=p1@QTRT1 | ||
}} | }} |
Latest revision as of 02:49, 25 September 2015
Short description: | p1@QTRT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_QTRT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000250237, ENST00000421333, NM_031209, uc002mpr.2_5end |
EntrezGene: | QTRT1 |
HGNC: | 23797 |
UniProt: | Q9BXR0B4DFM7Q71RF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.27e-13 | 86 |
nervous system | 3.11e-12 | 89 |
neural plate | 6.27e-12 | 82 |
presumptive neural plate | 6.27e-12 | 82 |
neural tube | 7.55e-12 | 56 |
neural rod | 7.55e-12 | 56 |
future spinal cord | 7.55e-12 | 56 |
neural keel | 7.55e-12 | 56 |
regional part of nervous system | 4.68e-11 | 53 |
regional part of brain | 4.68e-11 | 53 |
central nervous system | 1.20e-10 | 81 |
brain grey matter | 6.48e-10 | 34 |
gray matter | 6.48e-10 | 34 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
telencephalon | 1.88e-09 | 34 |
regional part of telencephalon | 2.08e-09 | 32 |
regional part of forebrain | 2.23e-09 | 41 |
forebrain | 2.23e-09 | 41 |
anterior neural tube | 2.23e-09 | 41 |
future forebrain | 2.23e-09 | 41 |
pre-chordal neural plate | 3.62e-09 | 61 |
cerebral hemisphere | 6.60e-09 | 32 |
ecto-epithelium | 6.74e-09 | 104 |
ectoderm-derived structure | 4.12e-08 | 171 |
ectoderm | 4.12e-08 | 171 |
presumptive ectoderm | 4.12e-08 | 171 |
regional part of cerebral cortex | 5.22e-08 | 22 |
structure with developmental contribution from neural crest | 5.86e-08 | 132 |
neocortex | 2.67e-07 | 20 |