FFCP PHASE1:Hg19::chr12:8380265..8380280,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37258 | |HGNC=37258 | ||
|TSSclassifier=strong | |||
|UniProt=Q6GMV1 | |UniProt=Q6GMV1 | ||
|association_with_transcript=-49bp_to_ENST00000437882_5end | |association_with_transcript=-49bp_to_ENST00000437882_5end | ||
|cluster_id=chr12:8380265..8380280,+ | |||
|description=CAGE_peak_1_at_ALG1L2_5end | |description=CAGE_peak_1_at_ALG1L2_5end | ||
|id=chr12:8380265..8380280,+ | |id=chr12:8380265..8380280,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.70e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.99e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.83e-15!57;UBERON:0005068!8.83e-15!57;UBERON:0006241!8.83e-15!57;UBERON:0007135!8.83e-15!57;UBERON:0002616!9.06e-14!59;UBERON:0003080!5.62e-12!42;UBERON:0002780!7.10e-12!41;UBERON:0001890!7.10e-12!41;UBERON:0006240!7.10e-12!41;UBERON:0000955!1.41e-11!69;UBERON:0006238!1.41e-11!69;UBERON:0001017!1.84e-11!82;UBERON:0005743!2.78e-11!86;UBERON:0002020!8.66e-11!34;UBERON:0003528!8.66e-11!34;UBERON:0003075!1.31e-10!86;UBERON:0007284!1.31e-10!86;UBERON:0001893!1.71e-10!34;UBERON:0002791!1.98e-10!33;UBERON:0002346!3.87e-10!90;UBERON:0001869!4.81e-10!32;UBERON:0003056!1.07e-09!61;UBERON:0000073!1.52e-09!94;UBERON:0001016!1.52e-09!94;UBERON:0000033!4.22e-09!123;UBERON:0000119!2.32e-08!312;UBERON:0000153!2.38e-08!129;UBERON:0007811!2.38e-08!129;UBERON:0000483!3.29e-08!309;UBERON:0000956!3.82e-08!25;UBERON:0000203!3.82e-08!25;UBERON:0002619!6.58e-08!22;UBERON:0000025!1.18e-07!194;UBERON:0007023!2.34e-07!115;UBERON:0004111!4.74e-07!241;UBERON:0001950!6.37e-07!20 | |ontology_enrichment_uberon=UBERON:0001049!8.83e-15!57;UBERON:0005068!8.83e-15!57;UBERON:0006241!8.83e-15!57;UBERON:0007135!8.83e-15!57;UBERON:0002616!9.06e-14!59;UBERON:0003080!5.62e-12!42;UBERON:0002780!7.10e-12!41;UBERON:0001890!7.10e-12!41;UBERON:0006240!7.10e-12!41;UBERON:0000955!1.41e-11!69;UBERON:0006238!1.41e-11!69;UBERON:0001017!1.84e-11!82;UBERON:0005743!2.78e-11!86;UBERON:0002020!8.66e-11!34;UBERON:0003528!8.66e-11!34;UBERON:0003075!1.31e-10!86;UBERON:0007284!1.31e-10!86;UBERON:0001893!1.71e-10!34;UBERON:0002791!1.98e-10!33;UBERON:0002346!3.87e-10!90;UBERON:0001869!4.81e-10!32;UBERON:0003056!1.07e-09!61;UBERON:0000073!1.52e-09!94;UBERON:0001016!1.52e-09!94;UBERON:0000033!4.22e-09!123;UBERON:0000119!2.32e-08!312;UBERON:0000153!2.38e-08!129;UBERON:0007811!2.38e-08!129;UBERON:0000483!3.29e-08!309;UBERON:0000956!3.82e-08!25;UBERON:0000203!3.82e-08!25;UBERON:0002619!6.58e-08!22;UBERON:0000025!1.18e-07!194;UBERON:0007023!2.34e-07!115;UBERON:0004111!4.74e-07!241;UBERON:0001950!6.37e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.30e-07;41!UBERON:0001890;1.30e-07;41!UBERON:0000073;4.12e-07;53!UBERON:0002616;4.12e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.34e-11,56;UBERON:0005068,8.34e-11,56;UBERON:0006241,8.34e-11,56;UBERON:0007135,8.34e-11,56;UBERON:0000073,3.62e-10,53;UBERON:0002616,3.62e-10,53;UBERON:0000955,6.65e-09,68;UBERON:0006238,6.65e-09,68;UBERON:0001017,1.84e-08,81;UBERON:0002780,3.31e-08,41;UBERON:0001890,3.31e-08,41;UBERON:0003080,3.31e-08,41;UBERON:0006240,3.31e-08,41;UBERON:0001016,3.11e-07,89;UBERON:0010314,6.95e-07,132;UBERON:0003075,7.04e-07,82;UBERON:0007284,7.04e-07,82;UBERON:0003528,9.59e-07,34;UBERON:0002020,9.59e-07,34 | |||
|phase1_expression=0,0,0.563817616383885,1.0007329835313,0,0,0,0,0.261185628199839,0.491467873003018,0.697801167972428,0.436882744260345,0.263766978228454,0,0,2.01697543935533,0,0,0.487932798790507,1.23121058076788,0.408001382488506,2.82109249330279,0.85870796139317,0.547497700291537,0.753255837568817,1.83392173795083,2.46301768349837,1.8890587515283,0,0.383829398097213,0,0,2.409647350226,0.369754010166788,0.387336002901508,0,0.587200878669695,0,0,0.217010870715852,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0.575384784644301,0,0.47296445977717,0,1.29096936716765,0,0,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0.316462387440884,0,0,0.209658645508376,0.112328631146495,0.300353785683013,0.32145117339416,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,2.10707267820062,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.512365278902701,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0,2.43806866313962,0,0.383587685530591,0.722878304769133,0.50133791063589,0.869079113764942,0.795285947051099,0.973269740605272,0.756278537312543,1.77383517970051,0.43917392846563,1.30979075497713,0.364295288292542,0,0.324547393654683,0.348259474598534,0.797747763113191,1.90792499444274,0,0.371457501329565,0.39752481473341,1.72046919021225,1.04142150482278,1.13061588384802,0.419499436209906,0.275118041940067,1.25396979922086,0.258416759169329,0.71153252537342,0.33472061276467,0,0.760272105718513,0.24406205754817,0.735326160691737,0,0.714397826272638,0.44905874525234,0.563057402416611,0,0.949265659568129,0.183201743930407,0,0,0.872188104285069,0,0.379891534993739,0.264818361626438,0.860509862246441,0.354668382198357,0,0,0,0.622422070799533,0.538842688278752,0.653847612453835,0.605429710579726,0.576175924479999,1.17160715916898,0.624320153660641,0.570471821544449,0.298897361103602,1.17434498643765,2.75184005425824,1.26405726032024,0.204154171254893,0.737005903870608,0.103325781175765,0,0.494533858557114,0,2.87447256726495,1.34668891163253,1.12606667884768,0,0,0.30648779579902,1.35214253015937,0.113432183160021,3.04962380671065,0.85422955527427,1.05965950579781,0.600182192168805,0.206105058476878,2.06112432036503,0.744467425326359,0.168776332241266,0,0.252433774244115,0.0920498986422993,0.161646056818812,2.13005755509969,0.302256294682921,0.169560592310488,0.193260853163297,1.09098448236334,0.860413786167011,3.29329006549908,2.38553582978673,4.88014560051977,3.21349270547648,4.03713361401005,0.72995471815166,1.56449532329816,1.92972281457866,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0.983907508344908,1.02940686179115,0.768251997860379,2.24803506515239,0.703702806881416,0.0925884451585296,1.62904152655162,0,0,0.463721619900307,0.821860859650752,0.433099343283221,0.462985512576611,0,0,0,0.738651018262192,0.468008530278475,0.445893486866185,2.81201501960331,0.671928512795438,0.425325291727159,0,0,0,0,0,0,0.288239906833923,0,0.253991577168676,0,0,0,0.102827492703324,0.901029173531752,0.571652865261156,0.672786506072164,0.43596006883328,0.4400297149257,0,0,0,0.26593811658487,0,0.514414748524284,0,0.799266537048298,0.142977993658148,0.542621605391443,2.46972101034231,0.325736184293735,0.355391948742546,0,0.301439377059586,0.871533458600294,0.899756920638513,1.2162378064119,1.00451418286425,0,0.239624855491583,1.14861935834114,0,0,0.61642896765115,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0.502548796003046,1.27587750330633,0,0,0,0.12269149171914,0,0.271265023699736,0.623912584592421,1.07057393278297,0.630809660135739,0.937131319941706,0.601892199455438,0,0,0.664225598535437,0.184369168541703,1.82455590382974,0.391602314925481,0.686286847621712,0.413536052245775,0.862856803274467,0.106727557803444,0.303127571446259,0,1.20956117331872,0,1.99500565274481,0.841980283299221,0.640695746278505,0,0.160853921143607,0,0.462629081407967,1.24293207719189,0.492762936082855,0,0.581051892299796,0.120859449591622,0.40101294060657,2.94659164594868,0.459257792658427,0.910455840033585,0.393373244878272,0.902399225814824,0.847168708148562,0.784349769176855,1.46139224653261,0.105551628892876,1.13733384070897,0.510281115829547,1.0795795805107,0,0.270946437543853,1.00337954770971,1.27438136522519,0.831076008928724,0.671624264166535,0,0,0.769350375349168,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0.580024309752732,1.54048617114644,1.84204409671355,1.37836572484531,1.18162269355101,1.0151168573996,0.596586391912706,0.445160178233687,0.661139661443912,2.30628080838127,2.55225424989168,1.11273558941105,1.39453664789186,3.1481234683064,1.3940745403212,1.84820148105653,0,0.869932992075073,0,0,2.232950216158,0,0.571890581771475,1.535386747868,0.42793898803392,0,0.78494864019923,0.719489830333259,0.274537029736055,0.589062011728432,0.404364963146632,0,0,0,0.731140468893853,0,0.818999468447914,0.282810863907425,0,0,1.99031692572366,2.19225442626881,0.578775534266688,0,0.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| ||
|short_description=p1@ALG1L2 | |short_description=p1@ALG1L2 | ||
}} | }} |
Latest revision as of 03:05, 25 September 2015
Short description: | p1@ALG1L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALG1L2_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000437882_5end |
EntrezGene: | NA |
HGNC: | 37258 |
UniProt: | Q6GMV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.99e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neural tube | 8.34e-11 | 56 |
neural rod | 8.34e-11 | 56 |
future spinal cord | 8.34e-11 | 56 |
neural keel | 8.34e-11 | 56 |
regional part of nervous system | 3.62e-10 | 53 |
regional part of brain | 3.62e-10 | 53 |
brain | 6.65e-09 | 68 |
future brain | 6.65e-09 | 68 |
central nervous system | 1.84e-08 | 81 |
regional part of forebrain | 3.31e-08 | 41 |
forebrain | 3.31e-08 | 41 |
anterior neural tube | 3.31e-08 | 41 |
future forebrain | 3.31e-08 | 41 |
nervous system | 3.11e-07 | 89 |
structure with developmental contribution from neural crest | 6.95e-07 | 132 |
neural plate | 7.04e-07 | 82 |
presumptive neural plate | 7.04e-07 | 82 |
brain grey matter | 9.59e-07 | 34 |
gray matter | 9.59e-07 | 34 |