FFCP PHASE1:Hg19::chr11:93862245..93862344,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=24145 | |EntrezGene=24145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8599 | |HGNC=8599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=150bp_to_ENST00000436171_5end | |association_with_transcript=150bp_to_ENST00000436171_5end | ||
|cluster_id=chr11:93862245..93862344,+ | |||
|description=CAGE_peak_2_at_PANX1_5end | |description=CAGE_peak_2_at_PANX1_5end | ||
|id=chr11:93862245..93862344,+ | |id=chr11:93862245..93862344,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.06e-11!180;CL:0000680!4.95e-09!57;CL:0000056!4.95e-09!57;CL:0000355!4.95e-09!57;CL:0000393!2.52e-08!60;CL:0000211!2.52e-08!60;CL:0002321!2.99e-08!248;CL:0000220!3.26e-08!246;CL:0000187!3.51e-08!54;CL:0000192!2.35e-07!42;CL:0000514!2.35e-07!42;CL:0000359!7.16e-07!32;CL:0000183!8.78e-07!59 | |ontology_enrichment_celltype=CL:0000055!3.06e-11!180;CL:0000680!4.95e-09!57;CL:0000056!4.95e-09!57;CL:0000355!4.95e-09!57;CL:0000393!2.52e-08!60;CL:0000211!2.52e-08!60;CL:0002321!2.99e-08!248;CL:0000220!3.26e-08!246;CL:0000187!3.51e-08!54;CL:0000192!2.35e-07!42;CL:0000514!2.35e-07!42;CL:0000359!7.16e-07!32;CL:0000183!8.78e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.05e-09,58;CL:0000056,3.05e-09,58;CL:0000355,3.05e-09,58;CL:0000393,1.58e-08,61;CL:0000211,1.58e-08,61;CL:0000187,2.22e-08,55;CL:0002321,4.85e-08,250;CL:0000192,1.53e-07,43;CL:0000514,1.53e-07,43;CL:0000359,6.21e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.07e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.15e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.35e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000467!1.51e-18!625;UBERON:0000480!2.57e-18!626;UBERON:0000468!2.94e-18!659;UBERON:0002050!3.85e-16!605;UBERON:0005423!3.85e-16!605;UBERON:0000923!6.49e-16!604;UBERON:0005291!6.49e-16!604;UBERON:0006598!6.49e-16!604;UBERON:0002532!6.49e-16!604;UBERON:0000922!1.06e-15!612;UBERON:0000914!5.19e-12!83;UBERON:0002329!5.19e-12!83;UBERON:0003077!5.19e-12!83;UBERON:0003059!5.19e-12!83;UBERON:0007282!5.19e-12!83;UBERON:0009618!5.19e-12!83;UBERON:0007285!5.19e-12!83;UBERON:0000486!2.26e-10!82;UBERON:0003102!5.89e-10!95;UBERON:0001134!1.01e-08!61;UBERON:0002036!1.01e-08!61;UBERON:0003082!1.01e-08!61;UBERON:0000475!1.15e-08!365;UBERON:0002385!1.29e-08!63;UBERON:0001015!1.29e-08!63;UBERON:0000383!1.29e-08!63;UBERON:0004290!2.00e-08!70;UBERON:0002204!2.97e-08!167;UBERON:0004121!1.58e-07!169;UBERON:0000062!1.78e-07!511;UBERON:0000033!4.69e-07!123;UBERON:0000481!4.76e-07!347;UBERON:0000924!5.90e-07!173;UBERON:0006601!5.90e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;9.88e-07;31!UBERON:0001015;9.88e-07;31!UBERON:0000383;9.88e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,5.79e-18,564;UBERON:0000923,2.02e-16,560;UBERON:0010316,2.02e-16,560;UBERON:0005291,2.02e-16,560;UBERON:0006598,2.02e-16,560;UBERON:0010317,2.02e-16,560;UBERON:0002532,2.02e-16,560;UBERON:0005423,3.57e-16,581;UBERON:0000922,5.90e-15,592;UBERON:0003102,2.43e-11,99;UBERON:0000486,1.05e-10,83;UBERON:0001134,6.28e-09,62;UBERON:0002036,6.28e-09,62;UBERON:0003082,6.28e-09,62;UBERON:0002204,7.06e-09,167;UBERON:0007524,7.76e-09,73;UBERON:0002385,8.06e-09,64;UBERON:0001015,8.06e-09,64;UBERON:0000383,8.06e-09,64;UBERON:0003077,8.43e-09,72;UBERON:0007285,8.43e-09,72;UBERON:0002329,1.00e-08,71;UBERON:0003059,1.00e-08,71;UBERON:0007282,1.00e-08,71;UBERON:0004290,1.00e-08,71;UBERON:0009618,1.00e-08,71;UBERON:0007503,1.43e-07,78;UBERON:0000926,9.76e-07,315;UBERON:0004120,9.76e-07,315;UBERON:0006603,9.76e-07,315 | |||
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| ||
|short_description=p2@PANX1 | |short_description=p2@PANX1 | ||
}} | }} |
Latest revision as of 03:13, 25 September 2015
Short description: | p2@PANX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PANX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 150bp_to_ENST00000436171_5end |
EntrezGene: | PANX1 |
HGNC: | 8599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.05e-09 | 58 |
myoblast | 3.05e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.05e-09 | 58 |
electrically responsive cell | 1.58e-08 | 61 |
electrically active cell | 1.58e-08 | 61 |
muscle cell | 2.22e-08 | 55 |
embryonic cell | 4.85e-08 | 250 |
smooth muscle cell | 1.53e-07 | 43 |
smooth muscle myoblast | 1.53e-07 | 43 |
vascular associated smooth muscle cell | 6.21e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
embryonic structure | 5.79e-18 | 564 |
germ layer | 2.02e-16 | 560 |
germ layer / neural crest | 2.02e-16 | 560 |
embryonic tissue | 2.02e-16 | 560 |
presumptive structure | 2.02e-16 | 560 |
germ layer / neural crest derived structure | 2.02e-16 | 560 |
epiblast (generic) | 2.02e-16 | 560 |
developing anatomical structure | 3.57e-16 | 581 |
embryo | 5.90e-15 | 592 |
surface structure | 2.43e-11 | 99 |
multilaminar epithelium | 1.05e-10 | 83 |
skeletal muscle tissue | 6.28e-09 | 62 |
striated muscle tissue | 6.28e-09 | 62 |
myotome | 6.28e-09 | 62 |
musculoskeletal system | 7.06e-09 | 167 |
dense mesenchyme tissue | 7.76e-09 | 73 |
muscle tissue | 8.06e-09 | 64 |
musculature | 8.06e-09 | 64 |
musculature of body | 8.06e-09 | 64 |
paraxial mesoderm | 8.43e-09 | 72 |
presumptive paraxial mesoderm | 8.43e-09 | 72 |
somite | 1.00e-08 | 71 |
presomitic mesoderm | 1.00e-08 | 71 |
presumptive segmental plate | 1.00e-08 | 71 |
dermomyotome | 1.00e-08 | 71 |
trunk paraxial mesoderm | 1.00e-08 | 71 |
epithelial vesicle | 1.43e-07 | 78 |
mesoderm | 9.76e-07 | 315 |
mesoderm-derived structure | 9.76e-07 | 315 |
presumptive mesoderm | 9.76e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.35e-07 | 14 |