FFCP PHASE1:Hg19::chr3:142315225..142315290,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5357 | |EntrezGene=5357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9090 | |HGNC=9090 | ||
|TSSclassifier=strong | |||
|UniProt=Q14651,C9JVY2,C9J359,C9JAM8,C9JYI1,C9JU08 | |UniProt=Q14651,C9JVY2,C9J359,C9JAM8,C9JYI1,C9JU08 | ||
|association_with_transcript=0bp_to_ENST00000457734,ENST00000461644,ENST00000475296,ENST00000476044,ENST00000483373,ENST00000495744,NM_001145319,uc010huv.2_5end | |association_with_transcript=0bp_to_ENST00000457734,ENST00000461644,ENST00000475296,ENST00000476044,ENST00000483373,ENST00000495744,NM_001145319,uc010huv.2_5end | ||
|cluster_id=chr3:142315225..142315290,+ | |||
|description=CAGE_peak_1_at_PLS1_5end | |description=CAGE_peak_1_at_PLS1_5end | ||
|id=chr3:142315225..142315290,+ | |id=chr3:142315225..142315290,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.24e-22!254;CL:0000223!4.58e-10!59;CL:0002076!3.02e-08!43 | |ontology_enrichment_celltype=CL:0000066!1.24e-22!254;CL:0000223!4.58e-10!59;CL:0002076!3.02e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.62e-07;42 | |ontology_enrichment_celltype_v019=CL:0002076;2.62e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.45e-25,253;CL:0000223,8.04e-12,58;CL:0002076,1.67e-09,42 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.11e-10;29!UBERON:0001041;3.92e-09;30!UBERON:0006595;5.43e-09;86 | |ontology_enrichment_development_v019=UBERON:0008947;6.11e-10;29!UBERON:0001041;3.92e-09;30!UBERON:0006595;5.43e-09;86 | ||
|ontology_enrichment_disease=DOID:162!6.00e-37!235;DOID:14566!2.53e-35!239;DOID:305!4.92e-35!106;DOID:0050687!6.20e-33!143;DOID:0050686!6.89e-17!137;DOID:299!1.47e-11!25;DOID:3119!3.66e-07!14 | |ontology_enrichment_disease=DOID:162!6.00e-37!235;DOID:14566!2.53e-35!239;DOID:305!4.92e-35!106;DOID:0050687!6.20e-33!143;DOID:0050686!6.89e-17!137;DOID:299!1.47e-11!25;DOID:3119!3.66e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:299;4.61e-12;25!DOID:305;4.27e-11;106!DOID:0050687;3.10e-08;143!DOID:3119;3.92e-07;14 | |ontology_enrichment_disease_v019=DOID:299;4.61e-12;25!DOID:305;4.27e-11;106!DOID:0050687;3.10e-08;143!DOID:3119;3.92e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:162,4.39e-37,235;DOID:305,1.18e-36,106;DOID:14566,1.43e-35,239;DOID:0050687,1.34e-33,143;DOID:0050686,9.45e-17,137;DOID:299,4.56e-12,25;DOID:3119,3.98e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.49e-15!155;UBERON:0001555!1.49e-15!155;UBERON:0007026!1.49e-15!155;UBERON:0004119!1.31e-14!169;UBERON:0000925!1.31e-14!169;UBERON:0006595!1.31e-14!169;UBERON:0004921!1.87e-14!129;UBERON:0004185!1.87e-14!129;UBERON:0000077!1.23e-11!130;UBERON:0001041!4.32e-11!98;UBERON:0005911!4.40e-09!82;UBERON:0005743!6.48e-09!86;UBERON:0000073!8.20e-09!94;UBERON:0001016!8.20e-09!94;UBERON:0001004!1.07e-08!72;UBERON:0008947!1.12e-08!38;UBERON:0003258!1.12e-08!38;UBERON:0005177!1.66e-08!107;UBERON:0000481!1.67e-08!347;UBERON:0000153!2.30e-08!129;UBERON:0007811!2.30e-08!129;UBERON:0000065!3.31e-08!53;UBERON:0004121!3.89e-08!169;UBERON:0007023!4.57e-08!115;UBERON:0001017!7.44e-08!82;UBERON:0000033!9.16e-08!123;UBERON:0000924!1.29e-07!173;UBERON:0006601!1.29e-07!173;UBERON:0003075!2.17e-07!86;UBERON:0007284!2.17e-07!86;UBERON:0000064!3.03e-07!219;UBERON:0000063!3.22e-07!97;UBERON:0000466!3.26e-07!126;UBERON:0002048!4.03e-07!22;UBERON:0000117!4.03e-07!22;UBERON:0000171!4.03e-07!22;UBERON:0000170!4.03e-07!22;UBERON:0005597!4.03e-07!22;UBERON:0000118!4.03e-07!22;UBERON:0001048!4.21e-07!168;UBERON:0003056!5.12e-07!61;UBERON:0005409!5.19e-07!35 | |ontology_enrichment_uberon=UBERON:0001007!1.49e-15!155;UBERON:0001555!1.49e-15!155;UBERON:0007026!1.49e-15!155;UBERON:0004119!1.31e-14!169;UBERON:0000925!1.31e-14!169;UBERON:0006595!1.31e-14!169;UBERON:0004921!1.87e-14!129;UBERON:0004185!1.87e-14!129;UBERON:0000077!1.23e-11!130;UBERON:0001041!4.32e-11!98;UBERON:0005911!4.40e-09!82;UBERON:0005743!6.48e-09!86;UBERON:0000073!8.20e-09!94;UBERON:0001016!8.20e-09!94;UBERON:0001004!1.07e-08!72;UBERON:0008947!1.12e-08!38;UBERON:0003258!1.12e-08!38;UBERON:0005177!1.66e-08!107;UBERON:0000481!1.67e-08!347;UBERON:0000153!2.30e-08!129;UBERON:0007811!2.30e-08!129;UBERON:0000065!3.31e-08!53;UBERON:0004121!3.89e-08!169;UBERON:0007023!4.57e-08!115;UBERON:0001017!7.44e-08!82;UBERON:0000033!9.16e-08!123;UBERON:0000924!1.29e-07!173;UBERON:0006601!1.29e-07!173;UBERON:0003075!2.17e-07!86;UBERON:0007284!2.17e-07!86;UBERON:0000064!3.03e-07!219;UBERON:0000063!3.22e-07!97;UBERON:0000466!3.26e-07!126;UBERON:0002048!4.03e-07!22;UBERON:0000117!4.03e-07!22;UBERON:0000171!4.03e-07!22;UBERON:0000170!4.03e-07!22;UBERON:0005597!4.03e-07!22;UBERON:0000118!4.03e-07!22;UBERON:0001048!4.21e-07!168;UBERON:0003056!5.12e-07!61;UBERON:0005409!5.19e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002048;2.06e-07;22!UBERON:0000117;2.06e-07;22!UBERON:0000171;2.06e-07;22!UBERON:0000170;2.06e-07;22!UBERON:0004807;4.57e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002048;2.06e-07;22!UBERON:0000117;2.06e-07;22!UBERON:0000171;2.06e-07;22!UBERON:0000170;2.06e-07;22!UBERON:0004807;4.57e-07;22 | ||
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| ||
|short_description=p1@PLS1 | |short_description=p1@PLS1 | ||
}} | }} |
Latest revision as of 04:50, 25 September 2015
Short description: | p1@PLS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000457734, ENST00000461644, ENST00000475296, ENST00000476044, ENST00000483373, ENST00000495744, NM_001145319, uc010huv.2_5end |
EntrezGene: | PLS1 |
HGNC: | 9090 |
UniProt: | Q14651C9JVY2C9J359C9JAM8C9JYI1C9JU08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.45e-25 | 253 |
endodermal cell | 8.04e-12 | 58 |
endo-epithelial cell | 1.67e-09 | 42 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.15e-19 | 223 |
digestive system | 2.26e-15 | 145 |
digestive tract | 2.26e-15 | 145 |
primitive gut | 2.26e-15 | 145 |
subdivision of digestive tract | 3.66e-14 | 118 |
endoderm-derived structure | 4.30e-14 | 160 |
endoderm | 4.30e-14 | 160 |
presumptive endoderm | 4.30e-14 | 160 |
foregut | 9.68e-11 | 87 |
endo-epithelium | 1.96e-10 | 82 |
trunk region element | 5.72e-10 | 101 |
respiratory primordium | 5.77e-09 | 38 |
endoderm of foregut | 5.77e-09 | 38 |
respiratory system | 8.83e-09 | 74 |
adult organism | 2.93e-08 | 114 |
respiratory tract | 3.04e-08 | 54 |
central nervous system | 1.41e-07 | 81 |
nervous system | 1.69e-07 | 89 |
lung | 2.23e-07 | 22 |
respiratory tube | 2.23e-07 | 22 |
respiration organ | 2.23e-07 | 22 |
pair of lungs | 2.23e-07 | 22 |
lung primordium | 2.23e-07 | 22 |
lung bud | 2.23e-07 | 22 |
ectoderm-derived structure | 3.45e-07 | 171 |
ectoderm | 3.45e-07 | 171 |
presumptive ectoderm | 3.45e-07 | 171 |
ecto-epithelium | 9.96e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.39e-37 | 235 |
carcinoma | 1.18e-36 | 106 |
disease of cellular proliferation | 1.43e-35 | 239 |
cell type cancer | 1.34e-33 | 143 |
organ system cancer | 9.45e-17 | 137 |
adenocarcinoma | 4.56e-12 | 25 |
gastrointestinal system cancer | 3.98e-07 | 14 |