FFCP PHASE1:Hg19::chr6:1389789..1389821,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2295 | |EntrezGene=2295 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3810 | |HGNC=3810 | ||
|TSSclassifier=strong | |||
|UniProt=Q12947 | |UniProt=Q12947 | ||
|association_with_transcript=-247bp_to_ENST00000259806,NM_001452,uc003mtm.2,uc003mtn.2_5end | |association_with_transcript=-247bp_to_ENST00000259806,NM_001452,uc003mtm.2,uc003mtn.2_5end | ||
|cluster_id=chr6:1389789..1389821,+ | |||
|coexpression_cluster_id=C2845 | |coexpression_cluster_id=C2845 | ||
|description=CAGE_peak_1_at_FOXF2_5end | |description=CAGE_peak_1_at_FOXF2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000055!8.23e-17!180;CL:0000057!1.84e-14!75 | |ontology_enrichment_celltype=CL:0000055!8.23e-17!180;CL:0000057!1.84e-14!75 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.26e-14,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.35e-13!365;UBERON:0000033!3.64e-12!123;UBERON:0000153!1.78e-11!129;UBERON:0007811!1.78e-11!129;UBERON:0000481!1.32e-10!347;UBERON:0000955!1.80e-09!69;UBERON:0006238!1.80e-09!69;UBERON:0005743!1.41e-08!86;UBERON:0002616!2.88e-08!59;UBERON:0003102!3.52e-08!95;UBERON:0001017!3.93e-08!82;UBERON:0001049!5.28e-08!57;UBERON:0005068!5.28e-08!57;UBERON:0006241!5.28e-08!57;UBERON:0007135!5.28e-08!57;UBERON:0004119!2.00e-07!169;UBERON:0000925!2.00e-07!169;UBERON:0006595!2.00e-07!169;UBERON:0000064!3.93e-07!219;UBERON:0000073!4.58e-07!94;UBERON:0001016!4.58e-07!94;UBERON:0001007!5.66e-07!155;UBERON:0001555!5.66e-07!155;UBERON:0007026!5.66e-07!155 | |ontology_enrichment_uberon=UBERON:0000475!1.35e-13!365;UBERON:0000033!3.64e-12!123;UBERON:0000153!1.78e-11!129;UBERON:0007811!1.78e-11!129;UBERON:0000481!1.32e-10!347;UBERON:0000955!1.80e-09!69;UBERON:0006238!1.80e-09!69;UBERON:0005743!1.41e-08!86;UBERON:0002616!2.88e-08!59;UBERON:0003102!3.52e-08!95;UBERON:0001017!3.93e-08!82;UBERON:0001049!5.28e-08!57;UBERON:0005068!5.28e-08!57;UBERON:0006241!5.28e-08!57;UBERON:0007135!5.28e-08!57;UBERON:0004119!2.00e-07!169;UBERON:0000925!2.00e-07!169;UBERON:0006595!2.00e-07!169;UBERON:0000064!3.93e-07!219;UBERON:0000073!4.58e-07!94;UBERON:0001016!4.58e-07!94;UBERON:0001007!5.66e-07!155;UBERON:0001555!5.66e-07!155;UBERON:0007026!5.66e-07!155 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,4.43e-14,223;UBERON:0000955,6.86e-10,68;UBERON:0006238,6.86e-10,68;UBERON:0001017,4.09e-08,81;UBERON:0004119,5.89e-08,160;UBERON:0000925,5.89e-08,160;UBERON:0006595,5.89e-08,160;UBERON:0001049,5.98e-08,56;UBERON:0005068,5.98e-08,56;UBERON:0006241,5.98e-08,56;UBERON:0007135,5.98e-08,56;UBERON:0000073,1.75e-07,53;UBERON:0002616,1.75e-07,53;UBERON:0001007,2.17e-07,145;UBERON:0001555,2.17e-07,145;UBERON:0007026,2.17e-07,145;UBERON:0002780,5.16e-07,41;UBERON:0001890,5.16e-07,41;UBERON:0003080,5.16e-07,41;UBERON:0006240,5.16e-07,41;UBERON:0001016,5.90e-07,89;UBERON:0003102,8.47e-07,99 | |||
|phase1_expression=9.26559734279839,3.63970890614671,3.24195129420734,1.0007329835313,2.68176656656373,7.85104671690332,0,3.15859936713415,1.04474251279935,19.9044488566222,4.88460817580699,0,0,20.7927472972878,14.5814845320283,2.6893005858071,2.41077811209591,2.92124036154949,3.90346239032406,0.984968464614303,0.408001382488506,4.70182082217132,1.14494394852423,0.410623275218653,1.63205431473244,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,11.2046137239216,11.0294340339896,8.5459446186886,0,4.37971383272372,0.0945348171640679,0,0.087834785693126,4.06035134042909,0,0,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,2.48485975847659,4.30543739659571,1.45650098894541,4.87622255272983,9.57604631935564,3.36406560085384,0,1.48000529050296,0.622422070799533,0,0,26.487549837863,27.0802684505599,10.3101430006871,4.37024107562449,1.71141546463335,7.32298534703825,1.996386476944,0.809364721840658,0.702254033511242,15.9240253578817,45.3258630880424,65.7151968277868,91.4762200107181,76.6527480763526,0.910161361938026,2.15585442544872,37.0339450698946,52.299541306481,27.9834756639025,77.2600612750275,33.7136575378922,47.6254646733912,0,2.69084453533293,2.98980344345994,5.08636562782948,5.70173082560364,3.09157587715317,1.28820270022815,2.04728541964749,4.21940830603166,5.45647228902712,3.28163906517349,5.24684422261106,17.6194201932505,3.55009592516614,3.82857973265033,22.3819981849844,0,0,0,0,0,0.580969714347592,0.207322110030741,0.252320850875628,0,1.56449532329816,1.28648187638577,0,0.928735856063958,0,16.0897248054188,16.0155455574197,12.2915625240576,16.4338019371267,21.5700649651482,14.2362371466658,9.16852895489118,8.24130153526453,8.0796902958742,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.122988438543114,1.88724591328378,0.109750285408626,0,0.100528972411631,0.0925884451585296,20.5259232345505,0,0,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0.766765358330422,0,0,0.621984346622316,0,0.12624243342638,8.06423257510547,16.0435138734477,7.03304683260282,10.2643467613623,10.6940592411456,1.8020583470635,5.71652865261156,15.8104828926959,11.3349617896653,15.1076868791157,0.129271715757778,17.8828222925941,3.381211010224,0,0,0.257207374262142,0,0,10.0084595560703,0,0.823240336780769,4.56030658011229,7.81862287233601,0,0.602878754119172,2.61460037580088,0,0,0,0,11.9812427745791,31.0127226752108,0,1.59259437334337,0.410952645100767,0,0,0,0,0,0.76228387266739,0,0,0.335032530668698,0,0,0,0,34.8443836482357,4.50153468953709,2.17012018959788,15.1818728917489,13.9174611261786,13.5624076929184,7.84847480451178,0,0,0,0,1.65932251687533,35.7091655463821,22.9087354231406,28.8240476001119,0,0,0,0,11.6504807657348,0.30239029332968,4.96215615637554,2.14846762603287,3.36792113319688,4.22859192543813,5.62877973973374,2.2519548960105,2.96836132889982,4.31787142647436,4.08391968220192,5.83102807698045,4.67328986265259,7.90230573527723,0.120859449591622,0,0.0920809889358963,16.7629094320326,0,23.7335191076558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79515087581472,0.656029291399411,0.650756789328606,10.0980191414768,8.33282129846925,5.5281364946794,0.574265537996172,0,0,1.54673149267395,0.616194468458578,0.15350367472613,0.689182862422653,0.751941714077915,0.580066775656914,0.255679882248303,0.801288320820636,0,0.576570202095319,0,0,2.32422774648643,0.94443704049192,2.0911118104818,4.92853728281742,1.06461206063404,1.73986598415015,1.8532421910392,0.143124886741991,4.09374206295634,1.2655176988749,0,17.9128453917934,20.1131324375943,1.90921948755562,1.56989728039846,4.31693898199955,1.64722217841633,2.82749765629647,1.81964233415984,0,2.94880919367287,46.8128389526007,1.46228093778771,0,0.682499557039929,6.36324443791707,5.65040583101214,4.41092274836899,0,0.876901770507525,32.4114299189345,49.1921064034975,0.811641507850816,0.6196469961995,4.22543403798362,0,0.392996164052485,0.7133421029625,0.354761064070598,7.38876723541824,4.93942339439853,17.0762928194572,12.9475846490644,0,0,0,8.28465446835657,5.16606447205476,5.05414427002877,5.76459199597678,2.29723400206959,0,0,0,0,0,0,0,0,0,2.88743956579008,17.1528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.447352215784832,0.834245708559542,0,0,0,0.270455678475983,0,0,0,0.879049075631364,0,0,0.284136146806413,0,0,0,1.9882952955326,4.07941307590487,1.78093928036649,0,0,1.79323189425963,4.97311047956066,0,5.21570280760989,0,2.79935628895627,0,1.07412704805365,0,13.5141465722599,0,11.1136990144637,4.84666373047609,3.24688343566479,1.99613798001194,0,0,3.62499787717397,4.55173793141999,0,1.65471377237555,0,0,0.520874984799877,0,3.0149109656352,0,2.76448149828062,2.364380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| ||
|short_description=p1@FOXF2 | |short_description=p1@FOXF2 | ||
}} | }} |
Latest revision as of 05:20, 25 September 2015
Short description: | p1@FOXF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXF2_5end |
Coexpression cluster: | C2845_Fibroblast_retina_normal_colon_Smooth_rectum_synovial |
Association with transcript: | -247bp_to_ENST00000259806, NM_001452, uc003mtm.2, uc003mtn.2_5end |
EntrezGene: | FOXF2 |
HGNC: | 3810 |
UniProt: | Q12947 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.26e-14 | 76 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 4.43e-14 | 223 |
brain | 6.86e-10 | 68 |
future brain | 6.86e-10 | 68 |
central nervous system | 4.09e-08 | 81 |
endoderm-derived structure | 5.89e-08 | 160 |
endoderm | 5.89e-08 | 160 |
presumptive endoderm | 5.89e-08 | 160 |
neural tube | 5.98e-08 | 56 |
neural rod | 5.98e-08 | 56 |
future spinal cord | 5.98e-08 | 56 |
neural keel | 5.98e-08 | 56 |
regional part of nervous system | 1.75e-07 | 53 |
regional part of brain | 1.75e-07 | 53 |
digestive system | 2.17e-07 | 145 |
digestive tract | 2.17e-07 | 145 |
primitive gut | 2.17e-07 | 145 |
regional part of forebrain | 5.16e-07 | 41 |
forebrain | 5.16e-07 | 41 |
anterior neural tube | 5.16e-07 | 41 |
future forebrain | 5.16e-07 | 41 |
nervous system | 5.90e-07 | 89 |
surface structure | 8.47e-07 | 99 |