FFCP PHASE1:Hg19::chr12:88974236..88974256,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4254 | |EntrezGene=4254 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6343 | |HGNC=6343 | ||
|TSSclassifier=strong | |||
|UniProt=P21583 | |UniProt=P21583 | ||
|association_with_transcript=0bp_to_ENST00000228280,ENST00000357116,ENST00000552044,NM_000899,NM_003994,uc001tav.2,uc001taw.2_5end | |association_with_transcript=0bp_to_ENST00000228280,ENST00000357116,ENST00000552044,NM_000899,NM_003994,uc001tav.2,uc001taw.2_5end | ||
|cluster_id=chr12:88974236..88974256,- | |||
|description=CAGE_peak_1_at_KITLG_5end | |description=CAGE_peak_1_at_KITLG_5end | ||
|id=chr12:88974236..88974256,- | |id=chr12:88974236..88974256,- | ||
|ontology_enrichment_celltype=CL:0000055!1.18e-11!180;CL:0000057!1.10e-10!75;CL:0002620!3.46e-10!23;CL:0000220!1.52e-08!246;CL:0002321!2.99e-08!248 | |ontology_enrichment_celltype=CL:0000055!1.18e-11!180;CL:0000057!1.10e-10!75;CL:0002620!3.46e-10!23;CL:0000220!1.52e-08!246;CL:0002321!2.99e-08!248 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.14e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.30e-10,76;CL:0002620,3.23e-10,23;CL:0002321,1.82e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.84e-25!659;UBERON:0000481!2.54e-24!347;UBERON:0000467!9.90e-22!625;UBERON:0000480!1.96e-21!626;UBERON:0000475!6.06e-21!365;UBERON:0000477!9.38e-15!286;UBERON:0000922!9.51e-15!612;UBERON:0002050!2.05e-14!605;UBERON:0005423!2.05e-14!605;UBERON:0000923!2.44e-14!604;UBERON:0005291!2.44e-14!604;UBERON:0006598!2.44e-14!604;UBERON:0002532!2.44e-14!604;UBERON:0000062!4.07e-14!511;UBERON:0000119!1.84e-13!312;UBERON:0000483!3.76e-13!309;UBERON:0003102!4.13e-13!95;UBERON:0003104!1.87e-11!238;UBERON:0009142!1.87e-11!238;UBERON:0004111!1.53e-10!241;UBERON:0002100!6.44e-09!216;UBERON:0005256!7.28e-09!143;UBERON:0000064!1.25e-08!219;UBERON:0001007!1.74e-08!155;UBERON:0001555!1.74e-08!155;UBERON:0007026!1.74e-08!155;UBERON:0002097!8.02e-08!40;UBERON:0004119!8.11e-08!169;UBERON:0000925!8.11e-08!169;UBERON:0006595!8.11e-08!169;UBERON:0002199!1.46e-07!45;UBERON:0002416!1.46e-07!45;UBERON:0000914!5.78e-07!83;UBERON:0002329!5.78e-07!83;UBERON:0003077!5.78e-07!83;UBERON:0003059!5.78e-07!83;UBERON:0007282!5.78e-07!83;UBERON:0009618!5.78e-07!83;UBERON:0007285!5.78e-07!83;UBERON:0000033!7.80e-07!123;UBERON:0004121!9.65e-07!169 | |ontology_enrichment_uberon=UBERON:0000468!3.84e-25!659;UBERON:0000481!2.54e-24!347;UBERON:0000467!9.90e-22!625;UBERON:0000480!1.96e-21!626;UBERON:0000475!6.06e-21!365;UBERON:0000477!9.38e-15!286;UBERON:0000922!9.51e-15!612;UBERON:0002050!2.05e-14!605;UBERON:0005423!2.05e-14!605;UBERON:0000923!2.44e-14!604;UBERON:0005291!2.44e-14!604;UBERON:0006598!2.44e-14!604;UBERON:0002532!2.44e-14!604;UBERON:0000062!4.07e-14!511;UBERON:0000119!1.84e-13!312;UBERON:0000483!3.76e-13!309;UBERON:0003102!4.13e-13!95;UBERON:0003104!1.87e-11!238;UBERON:0009142!1.87e-11!238;UBERON:0004111!1.53e-10!241;UBERON:0002100!6.44e-09!216;UBERON:0005256!7.28e-09!143;UBERON:0000064!1.25e-08!219;UBERON:0001007!1.74e-08!155;UBERON:0001555!1.74e-08!155;UBERON:0007026!1.74e-08!155;UBERON:0002097!8.02e-08!40;UBERON:0004119!8.11e-08!169;UBERON:0000925!8.11e-08!169;UBERON:0006595!8.11e-08!169;UBERON:0002199!1.46e-07!45;UBERON:0002416!1.46e-07!45;UBERON:0000914!5.78e-07!83;UBERON:0002329!5.78e-07!83;UBERON:0003077!5.78e-07!83;UBERON:0003059!5.78e-07!83;UBERON:0007282!5.78e-07!83;UBERON:0009618!5.78e-07!83;UBERON:0007285!5.78e-07!83;UBERON:0000033!7.80e-07!123;UBERON:0004121!9.65e-07!169 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005423,6.04e-14,581;UBERON:0000119,2.24e-13,309;UBERON:0000922,2.37e-13,592;UBERON:0003102,2.97e-13,99;UBERON:0000483,4.59e-13,306;UBERON:0011216,4.78e-12,223;UBERON:0002050,1.40e-11,564;UBERON:0000923,2.16e-11,560;UBERON:0010316,2.16e-11,560;UBERON:0005291,2.16e-11,560;UBERON:0006598,2.16e-11,560;UBERON:0010317,2.16e-11,560;UBERON:0002532,2.16e-11,560;UBERON:0004111,3.88e-10,240;UBERON:0003104,8.00e-10,160;UBERON:0009142,8.00e-10,160;UBERON:0001007,1.82e-09,145;UBERON:0001555,1.82e-09,145;UBERON:0007026,1.82e-09,145;UBERON:0004119,6.76e-09,160;UBERON:0000925,6.76e-09,160;UBERON:0006595,6.76e-09,160;UBERON:0002097,4.23e-08,41;UBERON:0002199,7.80e-08,46;UBERON:0002416,7.80e-08,46;UBERON:0002100,2.30e-07,199;UBERON:0010314,4.77e-07,132;UBERON:0004921,7.44e-07,118 | |||
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| ||
|short_description=p1@KITLG | |short_description=p1@KITLG | ||
}} | }} |
Latest revision as of 06:00, 25 September 2015
Short description: | p1@KITLG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KITLG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000228280, ENST00000357116, ENST00000552044, NM_000899, NM_003994, uc001tav.2, uc001taw.2_5end |
EntrezGene: | KITLG |
HGNC: | 6343 |
UniProt: | P21583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.30e-10 | 76 |
skin fibroblast | 3.23e-10 | 23 |
embryonic cell | 1.82e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
developing anatomical structure | 6.04e-14 | 581 |
cell layer | 2.24e-13 | 309 |
embryo | 2.37e-13 | 592 |
surface structure | 2.97e-13 | 99 |
epithelium | 4.59e-13 | 306 |
organ system subdivision | 4.78e-12 | 223 |
embryonic structure | 1.40e-11 | 564 |
germ layer | 2.16e-11 | 560 |
germ layer / neural crest | 2.16e-11 | 560 |
embryonic tissue | 2.16e-11 | 560 |
presumptive structure | 2.16e-11 | 560 |
germ layer / neural crest derived structure | 2.16e-11 | 560 |
epiblast (generic) | 2.16e-11 | 560 |
anatomical conduit | 3.88e-10 | 240 |
mesenchyme | 8.00e-10 | 160 |
entire embryonic mesenchyme | 8.00e-10 | 160 |
digestive system | 1.82e-09 | 145 |
digestive tract | 1.82e-09 | 145 |
primitive gut | 1.82e-09 | 145 |
endoderm-derived structure | 6.76e-09 | 160 |
endoderm | 6.76e-09 | 160 |
presumptive endoderm | 6.76e-09 | 160 |
skin of body | 4.23e-08 | 41 |
integument | 7.80e-08 | 46 |
integumental system | 7.80e-08 | 46 |
trunk | 2.30e-07 | 199 |
structure with developmental contribution from neural crest | 4.77e-07 | 132 |
subdivision of digestive tract | 7.44e-07 | 118 |